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- An example of a summary.csv file:
- <RUN_ID>
- Level,Yield,Projected Yield,Aligned,Error Rate,Intensity C1,%>=Q30
- Read 1,243.95,243.95,8.76,1.17,784,86.95
- Read 2 (I),6.83,6.83,0.00,nan,768,90.12
- Read 3 (I),6.83,6.83,0.00,nan,928,84.71
- Read 4,243.95,243.95,8.55,1.24,646,83.34
- Non-indexed,487.90,487.90,8.66,1.21,715,85.15
- Total,501.56,501.56,8.66,1.21,782,85.21
- Read 1
- Lane,Surface,Tiles,Density,Cluster PF,Legacy Phasing/Prephasing Rate,Phasing slope/offset,Prephasing slope/offset,Reads,Reads PF,%>=Q30,Yield,Cycles Error,Aligned,Error,Error (35),Error (75),Error (100),Intensity C1
- 1,-,156,2961 +/- 0,77.41 +/- 1.41,0.039 / 0.056,0.059 / 0.911,0.050 / 1.297,638.34,494.12,87.57,123.46,0 - 251,8.83 +/- 0.13,1.11 +/- 0.18,0.12 +/- 0.01,0.20 +/- 0.02,0.27 +/- 0.03,791 +/- 38
- 1,1,0,nan +/- nan,nan +/- nan,nan / nan,1.297 / 1.297,1.297 / 1.297,0.00,0.00,nan,nan,-,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan
- 1,2,156,2961 +/- 0,77.41 +/- 1.41,0.039 / 0.056,0.059 / 0.911,0.050 / 1.297,638.34,494.12,87.57,123.46,-,8.83 +/- 0.13,1.11 +/- 0.18,0.12 +/- 0.01,0.20 +/- 0.02,0.27 +/- 0.03,791 +/- 38
- 2,-,156,2961 +/- 0,75.48 +/- 2.89,0.037 / 0.050,0.061 / 0.947,0.051 / 1.356,638.34,481.79,86.32,120.48,0 - 251,8.69 +/- 0.10,1.23 +/- 0.42,0.13 +/- 0.02,0.21 +/- 0.03,0.27 +/- 0.04,778 +/- 51
- 2,1,0,nan +/- nan,nan +/- nan,nan / nan,1.356 / 1.356,1.356 / 1.356,0.00,0.00,nan,nan,-,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan
- 2,2,156,2961 +/- 0,75.48 +/- 2.89,0.037 / 0.050,0.061 / 0.947,0.051 / 1.356,638.34,481.79,86.32,120.48,-,8.69 +/- 0.10,1.23 +/- 0.42,0.13 +/- 0.02,0.21 +/- 0.03,0.27 +/- 0.04,778 +/- 51
- Read 2 (I)
- Lane,Surface,Tiles,Density,Cluster PF,Legacy Phasing/Prephasing Rate,Phasing slope/offset,Prephasing slope/offset,Reads,Reads PF,%>=Q30,Yield,Cycles Error,Aligned,Error,Error (35),Error (75),Error (100),Intensity C1
- 1,-,156,2961 +/- 0,77.41 +/- 1.41,nan / nan,0.000 / 0.000,0.000 / 0.000,638.34,494.12,90.75,3.46,0,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,786 +/- 48
- 1,1,0,nan +/- nan,nan +/- nan,nan / nan,0.000 / 0.000,0.000 / 0.000,0.00,0.00,nan,nan,-,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan
- 1,2,156,2961 +/- 0,77.41 +/- 1.41,nan / nan,0.000 / 0.000,0.000 / 0.000,638.34,494.12,90.75,3.46,-,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,786 +/- 48
- 2,-,156,2961 +/- 0,75.48 +/- 2.89,nan / nan,0.000 / 0.000,0.000 / 0.000,638.34,481.79,89.47,3.37,0,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,750 +/- 71
- 2,1,0,nan +/- nan,nan +/- nan,nan / nan,0.000 / 0.000,0.000 / 0.000,0.00,0.00,nan,nan,-,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan
- 2,2,156,2961 +/- 0,75.48 +/- 2.89,nan / nan,0.000 / 0.000,0.000 / 0.000,638.34,481.79,89.47,3.37,-,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,750 +/- 71
- Read 3 (I)
- Lane,Surface,Tiles,Density,Cluster PF,Legacy Phasing/Prephasing Rate,Phasing slope/offset,Prephasing slope/offset,Reads,Reads PF,%>=Q30,Yield,Cycles Error,Aligned,Error,Error (35),Error (75),Error (100),Intensity C1
- 1,-,156,2961 +/- 0,77.41 +/- 1.41,nan / nan,0.000 / 0.000,0.000 / 0.000,638.34,494.12,85.37,3.46,0,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,936 +/- 99
- 1,1,0,nan +/- nan,nan +/- nan,nan / nan,0.000 / 0.000,0.000 / 0.000,0.00,0.00,nan,nan,-,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan
- 1,2,156,2961 +/- 0,77.41 +/- 1.41,nan / nan,0.000 / 0.000,0.000 / 0.000,638.34,494.12,85.37,3.46,-,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,936 +/- 99
- 2,-,156,2961 +/- 0,75.48 +/- 2.89,nan / nan,0.000 / 0.000,0.000 / 0.000,638.34,481.79,84.03,3.37,0,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,919 +/- 138
- 2,1,0,nan +/- nan,nan +/- nan,nan / nan,0.000 / 0.000,0.000 / 0.000,0.00,0.00,nan,nan,-,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan
- 2,2,156,2961 +/- 0,75.48 +/- 2.89,nan / nan,0.000 / 0.000,0.000 / 0.000,638.34,481.79,84.03,3.37,-,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,919 +/- 138
- Read 4
- Lane,Surface,Tiles,Density,Cluster PF,Legacy Phasing/Prephasing Rate,Phasing slope/offset,Prephasing slope/offset,Reads,Reads PF,%>=Q30,Yield,Cycles Error,Aligned,Error,Error (35),Error (75),Error (100),Intensity C1
- 1,-,156,2961 +/- 0,77.41 +/- 1.41,0.030 / 0.021,0.065 / 0.744,0.055 / 0.687,638.34,494.12,84.29,123.47,0 - 251,8.63 +/- 0.15,1.10 +/- 0.29,0.18 +/- 0.03,0.29 +/- 0.05,0.35 +/- 0.06,657 +/- 70
- 1,1,0,nan +/- nan,nan +/- nan,nan / nan,0.687 / 0.687,0.687 / 0.687,0.00,0.00,nan,nan,-,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan
- 1,2,156,2961 +/- 0,77.41 +/- 1.41,0.030 / 0.021,0.065 / 0.744,0.055 / 0.687,638.34,494.12,84.29,123.47,-,8.63 +/- 0.15,1.10 +/- 0.29,0.18 +/- 0.03,0.29 +/- 0.05,0.35 +/- 0.06,657 +/- 70
- 2,-,156,2961 +/- 0,75.48 +/- 2.89,0.030 / 0.012,0.066 / 0.810,0.056 / 0.730,638.34,481.79,82.36,120.49,0 - 251,8.48 +/- 0.14,1.39 +/- 0.76,0.19 +/- 0.05,0.33 +/- 0.10,0.40 +/- 0.15,635 +/- 99
- 2,1,0,nan +/- nan,nan +/- nan,nan / nan,0.730 / 0.730,0.730 / 0.730,0.00,0.00,nan,nan,-,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan,nan +/- nan
- 2,2,156,2961 +/- 0,75.48 +/- 2.89,0.030 / 0.012,0.066 / 0.810,0.056 / 0.730,638.34,481.79,82.36,120.49,-,8.48 +/- 0.14,1.39 +/- 0.76,0.19 +/- 0.05,0.33 +/- 0.10,0.40 +/- 0.15,635 +/- 99
- Extracted: 518
- Called: 518
- Scored: 518
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