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- $ python setup.py install_radex install_myradex build install
- /Users/adam/miniconda3/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires'
- warnings.warn(msg)
- running install_radex
- Downloading RADEX
- Download succeeded, or at least didn't obviously fail.
- Extracting RADEX source from file /Users/adam/.astropy/cache/download/py3/1defa05c60c0df7c847ebc33345310c6
- Reading fortran codes...
- Reading file 'main.f' (format:fix,strict)
- Reading file 'radex.inc' (format:fix)
- Line #25 in main.f:" integer niter ! iteration counter"
- updatevars: could not crack entity declaration "niter!". Ignoring.
- Line #26 in main.f:" integer imore ! are we running again?"
- updatevars: could not crack entity declaration "imore!". Ignoring.
- Line #26 in main.f:" integer imore ! are we running again?"
- updatevars: could not crack entity declaration "again?". Ignoring.
- Line #29 in main.f:" logical conv ! are we converged?"
- updatevars: could not crack entity declaration "conv!". Ignoring.
- Line #29 in main.f:" logical conv ! are we converged?"
- updatevars: attempt to change the type of "are" ("integer") to "logical". Ignoring.
- Line #29 in main.f:" logical conv ! are we converged?"
- updatevars: attempt to change the type of "we" ("integer") to "logical". Ignoring.
- Line #29 in main.f:" logical conv ! are we converged?"
- updatevars: could not crack entity declaration "converged?". Ignoring.
- Reading file 'background.f' (format:fix,strict)
- Reading file 'radex.inc' (format:fix)
- Reading file 'radex.inc' (format:fix)
- Reading file 'slatec.f' (format:fix,strict)
- Reading file 'matrix.f' (format:fix,strict)
- Reading file 'radex.inc' (format:fix)
- Line #25 in matrix.f:" integer niter ! iteration counter"
- updatevars: could not crack entity declaration "niter!". Ignoring.
- Line #26 in matrix.f:" integer ilev,jlev,klev ! to loop over energy levels"
- updatevars: could not crack entity declaration "klev!". Ignoring.
- Line #27 in matrix.f:" integer nplus ! to solve statistical equilibrium"
- updatevars: could not crack entity declaration "nplus!". Ignoring.
- Line #28 in matrix.f:" integer iline ! to loop over lines"
- updatevars: could not crack entity declaration "iline!". Ignoring.
- Line #29 in matrix.f:" integer m,n ! line upper/lower levels"
- updatevars: could not crack entity declaration "n!". Ignoring.
- Line #29 in matrix.f:" integer m,n ! line upper/lower levels"
- updatevars: could not crack entity declaration "upper/lower". Ignoring.
- Line #30 in matrix.f:" integer nthick ! counts optically thick lines"
- updatevars: could not crack entity declaration "nthick!". Ignoring.
- Line #31 in matrix.f:" integer nfat ! counts highly optically thick lines"
- updatevars: could not crack entity declaration "nfat!". Ignoring.
- Line #32 in matrix.f:" integer nreduce ! size of reduced rate matrix"
- updatevars: could not crack entity declaration "nreduce!". Ignoring.
- rmbadname1: Replacing "size" with "size_bn".
- Line #34 in matrix.f:" integer indx,dsign ! needed for NumRep equation solver"
- updatevars: could not crack entity declaration "dsign!". Ignoring.
- rmbadname1: Replacing "for" with "for_bn".
- Line #35 in matrix.f:" real*8 rhs(maxlev) ! RHS of rate equation"
- updatevars: could not crack entity declaration "rhs(maxlev)!". Ignoring.
- Line #35 in matrix.f:" real*8 rhs(maxlev) ! RHS of rate equation"
- updatevars: attempt to change the type of "of" ("integer") to "real". Ignoring.
- Line #35 in matrix.f:" real*8 rhs(maxlev) ! RHS of rate equation"
- updatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.
- Line #35 in matrix.f:" real*8 rhs(maxlev) ! RHS of rate equation"
- updatevars: attempt to change the type of "equation" ("integer") to "real". Ignoring.
- Line #37 in matrix.f:" real*8 yrate(maxlev,maxlev) ! rate matrix"
- updatevars: could not crack entity declaration "yrate(maxlev,maxlev)!". Ignoring.
- Line #37 in matrix.f:" real*8 yrate(maxlev,maxlev) ! rate matrix"
- updatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.
- Line #37 in matrix.f:" real*8 yrate(maxlev,maxlev) ! rate matrix"
- updatevars: attempt to change the type of "matrix" ("integer") to "real". Ignoring.
- Line #38 in matrix.f:" real*8 etr,exr ! to calculate radiative rates"
- updatevars: could not crack entity declaration "exr!". Ignoring.
- Line #38 in matrix.f:" real*8 etr,exr ! to calculate radiative rates"
- updatevars: attempt to change the type of "to" ("integer") to "real". Ignoring.
- Line #39 in matrix.f:" real*8 xt ! frequency cubed"
- updatevars: could not crack entity declaration "xt!". Ignoring.
- Line #40 in matrix.f:" real*8 hnu ! photon energy"
- updatevars: could not crack entity declaration "hnu!". Ignoring.
- Line #40 in matrix.f:" real*8 hnu ! photon energy"
- updatevars: attempt to change the type of "energy" ("integer") to "real". Ignoring.
- Line #41 in matrix.f:" real*8 bnutex ! line source function"
- updatevars: could not crack entity declaration "bnutex!". Ignoring.
- Line #41 in matrix.f:" real*8 bnutex ! line source function"
- updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
- Line #42 in matrix.f:" real*8 cddv ! N(mol) / delta V"
- updatevars: could not crack entity declaration "cddv!". Ignoring.
- Line #42 in matrix.f:" real*8 cddv ! N(mol) / delta V"
- updatevars: attempt to change the type of "n" ("integer") to "real". Ignoring.
- Line #42 in matrix.f:" real*8 cddv ! N(mol) / delta V"
- updatevars: could not crack entity declaration "n(mol)/delta". Ignoring.
- Line #43 in matrix.f:" real*8 beta,escprob ! escape probability"
- updatevars: could not crack entity declaration "escprob!". Ignoring.
- Line #45 in matrix.f:" real*8 bnu ! Planck function"
- updatevars: could not crack entity declaration "bnu!". Ignoring.
- Line #46 in matrix.f:" real*8 uarray(maxlev,maxlev) ! reduced rate matrix"
- updatevars: could not crack entity declaration "uarray(maxlev,maxlev)!". Ignoring.
- Line #46 in matrix.f:" real*8 uarray(maxlev,maxlev) ! reduced rate matrix"
- updatevars: attempt to change the type of "reduced" ("integer") to "real". Ignoring.
- Line #46 in matrix.f:" real*8 uarray(maxlev,maxlev) ! reduced rate matrix"
- updatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.
- Line #46 in matrix.f:" real*8 uarray(maxlev,maxlev) ! reduced rate matrix"
- updatevars: attempt to change the type of "matrix" ("integer") to "real". Ignoring.
- Line #47 in matrix.f:" real*8 redcrit ! reduction criterion"
- updatevars: could not crack entity declaration "redcrit!". Ignoring.
- Line #48 in matrix.f:" real*8 sumx ! summed radiative rate"
- updatevars: could not crack entity declaration "sumx!". Ignoring.
- Line #48 in matrix.f:" real*8 sumx ! summed radiative rate"
- updatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.
- Line #49 in matrix.f:" real*8 total ! to normalize populations"
- updatevars: could not crack entity declaration "total!". Ignoring.
- Line #49 in matrix.f:" real*8 total ! to normalize populations"
- updatevars: attempt to change the type of "to" ("integer") to "real". Ignoring.
- Line #51 in matrix.f:" real*8 tsum,thistex ! to check convergence"
- updatevars: could not crack entity declaration "thistex!". Ignoring.
- Line #51 in matrix.f:" real*8 tsum,thistex ! to check convergence"
- updatevars: attempt to change the type of "to" ("integer") to "real". Ignoring.
- Line #54 in matrix.f:" logical conv ! are we converged?"
- updatevars: could not crack entity declaration "conv!". Ignoring.
- Line #54 in matrix.f:" logical conv ! are we converged?"
- updatevars: could not crack entity declaration "converged?". Ignoring.
- Reading file 'radex.inc' (format:fix)
- Line #329 in matrix.f:" real*8 taur !optical radius"
- updatevars: could not crack entity declaration "taur!optical". Ignoring.
- Reading file 'io.f' (format:fix,strict)
- Reading file 'radex.inc' (format:fix)
- Line #24 in io.f:" integer length ! subroutine to determine"
- updatevars: could not crack entity declaration "length!". Ignoring.
- Line #26 in io.f:" integer ipart ! loop over collision partners"
- updatevars: could not crack entity declaration "ipart!". Ignoring.
- Line #27 in io.f:" character*10 partner ! name of collision partner"
- updatevars: no name pattern found for entity='!'. Skipping.
- Line #27 in io.f:" character*10 partner ! name of collision partner"
- updatevars: attempt to change the type of "collision" ("integer") to "character". Ignoring.
- updatevars:collision: attempt to change empty charselector to {'*': '10'}. Ignoring.
- Line #30 in io.f:" integer id ! ID code of collision partner"
- updatevars: could not crack entity declaration "id!". Ignoring.
- Line #30 in io.f:" integer id ! ID code of collision partner"
- updatevars: attempt to change the type of "of" ("character") to "integer". Ignoring.
- Line #30 in io.f:" integer id ! ID code of collision partner"
- updatevars: attempt to change the type of "partner" ("character") to "integer". Ignoring.
- Reading file 'radex.inc' (format:fix)
- Line #162 in io.f:" integer ipart ! to loop over collision partners"
- updatevars: could not crack entity declaration "ipart!". Ignoring.
- Reading file 'radex.inc' (format:fix)
- Line #201 in io.f:" integer iline ! to loop over lines"
- updatevars: could not crack entity declaration "iline!". Ignoring.
- Line #202 in io.f:" integer m,n ! upper & lower level of the line"
- updatevars: could not crack entity declaration "n!". Ignoring.
- Line #202 in io.f:" integer m,n ! upper & lower level of the line"
- updatevars: no name pattern found for entity='&'. Skipping.
- Line #204 in io.f:" integer niter ! final number of iterations"
- updatevars: could not crack entity declaration "niter!". Ignoring.
- Line #208 in io.f:" real*8 xt ! frequency cubed"
- updatevars: could not crack entity declaration "xt!". Ignoring.
- Line #209 in io.f:" real*8 hnu ! photon energy"
- updatevars: could not crack entity declaration "hnu!". Ignoring.
- Line #210 in io.f:" real*8 bnutex ! line source function"
- updatevars: could not crack entity declaration "bnutex!". Ignoring.
- Line #210 in io.f:" real*8 bnutex ! line source function"
- updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
- Line #211 in io.f:" real*8 ftau ! exp(-tau)"
- updatevars: could not crack entity declaration "ftau!". Ignoring.
- Line #212 in io.f:" real*8 toti ! background intensity"
- updatevars: could not crack entity declaration "toti!". Ignoring.
- Line #213 in io.f:" real*8 tbl ! black body temperature"
- updatevars: could not crack entity declaration "tbl!". Ignoring.
- Line #214 in io.f:" real*8 wh ! Planck correction"
- updatevars: could not crack entity declaration "wh!". Ignoring.
- Line #215 in io.f:" real*8 tback ! background temperature"
- updatevars: could not crack entity declaration "tback!". Ignoring.
- Line #216 in io.f:" real*8 ta ! line antenna temperature"
- updatevars: could not crack entity declaration "ta!". Ignoring.
- Line #216 in io.f:" real*8 ta ! line antenna temperature"
- updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
- Line #217 in io.f:" real*8 tr ! line radiation temperature"
- updatevars: could not crack entity declaration "tr!". Ignoring.
- Line #217 in io.f:" real*8 tr ! line radiation temperature"
- updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
- Line #218 in io.f:" real*8 beta,escprob ! escape probability"
- updatevars: no name pattern found for entity='!'. Skipping.
- Line #220 in io.f:" real*8 bnu ! Planck function"
- updatevars: could not crack entity declaration "bnu!". Ignoring.
- Line #221 in io.f:" real*8 kkms ! line integrated intensity (K km/s)"
- updatevars: could not crack entity declaration "kkms!". Ignoring.
- Line #221 in io.f:" real*8 kkms ! line integrated intensity (K km/s)"
- updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
- Line #222 in io.f:" real*8 ergs ! line flux (erg / s / cm^2)"
- updatevars: could not crack entity declaration "ergs!". Ignoring.
- Line #222 in io.f:" real*8 ergs ! line flux (erg / s / cm^2)"
- updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
- Line #227 in io.f:" real*8 wavel ! line wavelength (micron)"
- updatevars: could not crack entity declaration "wavel!". Ignoring.
- Line #227 in io.f:" real*8 wavel ! line wavelength (micron)"
- updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
- Reading file 'readdata.f' (format:fix,strict)
- Reading file 'radex.inc' (format:fix)
- Line #25 in readdata.f:" integer ilev,jlev ! to loop over energy levels"
- updatevars: could not crack entity declaration "jlev!". Ignoring.
- Line #26 in readdata.f:" integer iline ! to loop over lines"
- updatevars: could not crack entity declaration "iline!". Ignoring.
- Line #27 in readdata.f:" integer ipart,jpart ! to loop over collision partners"
- updatevars: no name pattern found for entity='!'. Skipping.
- Line #28 in readdata.f:" integer itemp ! to loop over collision temperatures"
- updatevars: could not crack entity declaration "itemp!". Ignoring.
- Line #29 in readdata.f:" integer icoll ! to loop over collisional transitions"
- updatevars: could not crack entity declaration "icoll!". Ignoring.
- Line #31 in readdata.f:" integer dummy ! to skip part of the file"
- updatevars: could not crack entity declaration "dummy!". Ignoring.
- Line #34 in readdata.f:" integer id(maxpart) ! to identify collision partners"
- updatevars: could not crack entity declaration "id(maxpart)!". Ignoring.
- Line #40 in readdata.f:" real*8 temp(maxtemp) ! collision temperatures"
- updatevars: could not crack entity declaration "temp(maxtemp)!". Ignoring.
- Line #40 in readdata.f:" real*8 temp(maxtemp) ! collision temperatures"
- updatevars: attempt to change the type of "collision" ("integer") to "real". Ignoring.
- Line #40 in readdata.f:" real*8 temp(maxtemp) ! collision temperatures"
- updatevars: attempt to change the type of "temperatures" ("integer") to "real". Ignoring.
- Line #43 in readdata.f:" character*120 collref ! text about source of collisional data"
- updatevars: no name pattern found for entity='!'. Skipping.
- Line #43 in readdata.f:" character*120 collref ! text about source of collisional data"
- updatevars: attempt to change the type of "of" ("integer") to "character". Ignoring.
- updatevars:of: attempt to change empty charselector to {'*': '120'}. Ignoring.
- Line #43 in readdata.f:" character*120 collref ! text about source of collisional data"
- updatevars: attempt to change the type of "collisional" ("integer") to "character". Ignoring.
- updatevars:collisional: attempt to change empty charselector to {'*': '120'}. Ignoring.
- Post-processing...
- Block: radex
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- Block: backrad
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- Block: galbr
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- Block: splcoeff
- Block: splintrp
- Block: ludcmp
- Block: lubksb
- Block: sgeir
- Block: r1mach
- Block: sasum
- Block: scopy
- Block: sdsdot
- Block: sgefa
- Block: isamax
- Block: saxpy
- Block: sscal
- Block: sgesl
- Block: sdot
- Block: xermsg
- Block: j4save
- Block: xercnt
- Block: xerhlt
- Block: xerprn
- Block: i1mach
- Block: xgetua
- Block: xersve
- analyzevars: character array "character*8 libtab(10)" is considered as "character libtab(10,8)"; "intent(c)" is forced.
- analyzevars: character array "character*8 subtab(10)" is considered as "character subtab(10,8)"; "intent(c)" is forced.
- analyzevars: character array "character*20 mestab(10)" is considered as "character mestab(10,20)"; "intent(c)" is forced.
- Block: fdump
- Block: matrix
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- Block: escprob
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- Block: getinputs
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- Block: defaults
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- Block: length
- Block: output
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- In: io.f:output
- getarrlen:variable "micron" undefined
- Block: readdata
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- Post-processing (stage 2)...
- Saving signatures to file "./radex.pyf"
- rmbadname1: Replacing "size" with "size_bn".
- rmbadname1: Replacing "for" with "for_bn".
- updatevars:collision: attempt to change empty charselector to {'*': '10'}. Ignoring.
- updatevars:of: attempt to change empty charselector to {'*': '120'}. Ignoring.
- updatevars:collisional: attempt to change empty charselector to {'*': '120'}. Ignoring.
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- analyzevars: character array "character*8 libtab(10)" is considered as "character libtab(10,8)"; "intent(c)" is forced.
- analyzevars: character array "character*8 subtab(10)" is considered as "character subtab(10,8)"; "intent(c)" is forced.
- analyzevars: character array "character*20 mestab(10)" is considered as "character mestab(10,20)"; "intent(c)" is forced.
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
- In file included from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:0,
- from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
- from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
- from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/fortranobject.h:13,
- from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/fortranobject.c:2:
- /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
- #warning "Using deprecated NumPy API, disable it with " \
- ^
- In file included from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:0,
- from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
- from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
- from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/fortranobject.h:13,
- from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radexmodule.c:16:
- /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
- #warning "Using deprecated NumPy API, disable it with " \
- ^
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radexmodule.c:177:12: warning: ‘f2py_size’ defined but not used [-Wunused-function]
- static int f2py_size(PyArrayObject* var, ...)
- ^
- Warning: Nonconforming tab character in column 1 of line 4738
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- Warning: Nonconforming tab character in column 1 of line 6575
- Warning: Nonconforming tab character in column 1 of line 6576
- Warning: Nonconforming tab character in column 1 of line 6577
- Warning: Nonconforming tab character in column 1 of line 6578
- Warning: Nonconforming tab character in column 1 of line 6579
- Warning: Nonconforming tab character in column 1 of line 6581
- Warning: Nonconforming tab character in column 1 of line 6582
- Warning: Nonconforming tab character in column 1 of line 6591
- Warning: Nonconforming tab character in column 1 of line 6592
- Warning: Nonconforming tab character in column 1 of line 6593
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:492.72:
- if (h.eq.0.d0) pause 'Warning: bad xin input in splintrp '
- 1
- Warning: Deleted feature: PAUSE statement at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4022.31:
- real*8 xpopold(maxlev)
- 1
- Warning: Nonconforming tab character at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4395.3:
- 41 write(*,21) 'Minimum and maximum output frequency [GHz] ? '
- 1
- Warning: Label 41 at (1) defined but not used
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4388.62:
- $ molfile = radat(1:length(radat))//molfile(1:length(molfile))
- 1
- Warning: Character length of actual argument shorter than of dummy argument 'str' (120/200) at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4388.36:
- $ molfile = radat(1:length(radat))//molfile(1:length(molfile))
- 1
- Warning: Character length of actual argument shorter than of dummy argument 'str' (120/200) at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4389.36:
- write(13,20) molfile(1:length(molfile))
- 1
- Warning: Character length of actual argument shorter than of dummy argument 'str' (120/200) at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4393.36:
- write(13,20) outfile(1:length(outfile))
- 1
- Warning: Character length of actual argument shorter than of dummy argument 'str' (120/200) at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4193.42:
- call ludcmp(uarray,nreduce+1,maxlev,indx,dsign)
- 1
- Warning: Rank mismatch in argument 'indx' at (1) (rank-1 and scalar)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:776.12:
- IND = -LOG10(MAX(R1MACH(4),DNORM/XNORM))
- 1
- Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4194.42:
- call lubksb(uarray,nreduce+1,maxlev,indx,rhs)
- 1
- Warning: Rank mismatch in argument 'indx' at (1) (rank-1 and scalar)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4211.40:
- call ludcmp(yrate,nplus,maxlev,indx,dsign)
- 1
- Warning: Rank mismatch in argument 'indx' at (1) (rank-1 and scalar)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4212.40:
- call lubksb(yrate,nplus,maxlev,indx,rhs)
- 1
- Warning: Rank mismatch in argument 'indx' at (1) (rank-1 and scalar)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4575.31:
- $ //version(1:length(version))
- 1
- Warning: Character length of actual argument shorter than of dummy argument 'str' (20/200) at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:547.35:
- SUBROUTINE lubksb(a,n,np,indx,b)
- 1
- Warning: Unused dummy argument 'indx' at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:537.25:
- SUBROUTINE ludcmp(a,n,np,indx,d)
- 1
- Warning: Unused dummy argument 'a' at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:537.37:
- SUBROUTINE ludcmp(a,n,np,indx,d)
- 1
- Warning: Unused dummy argument 'd' at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:537.35:
- SUBROUTINE ludcmp(a,n,np,indx,d)
- 1
- Warning: Unused dummy argument 'indx' at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2564.30:
- SUBROUTINE XERHLT (MESSG)
- 1
- Warning: Unused dummy argument 'messg' at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2502.67:
- SUBROUTINE XERCNT (LIBRAR, SUBROU, MESSG, NERR, LEVEL, KONTRL)
- 1
- Warning: Unused dummy argument 'kontrl' at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2502.59:
- SUBROUTINE XERCNT (LIBRAR, SUBROU, MESSG, NERR, LEVEL, KONTRL)
- 1
- Warning: Unused dummy argument 'level' at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2502.31:
- SUBROUTINE XERCNT (LIBRAR, SUBROU, MESSG, NERR, LEVEL, KONTRL)
- 1
- Warning: Unused dummy argument 'librar' at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2502.46:
- SUBROUTINE XERCNT (LIBRAR, SUBROU, MESSG, NERR, LEVEL, KONTRL)
- 1
- Warning: Unused dummy argument 'messg' at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2502.52:
- SUBROUTINE XERCNT (LIBRAR, SUBROU, MESSG, NERR, LEVEL, KONTRL)
- 1
- Warning: Unused dummy argument 'nerr' at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2502.39:
- SUBROUTINE XERCNT (LIBRAR, SUBROU, MESSG, NERR, LEVEL, KONTRL)
- 1
- Warning: Unused dummy argument 'subrou' at (1)
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f: In function ‘matrix’:
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4266:0: warning: ‘cddv’ may be used uninitialized in this function [-Wmaybe-uninitialized]
- $ /(fgaus*xt/aeinst(iline))
- ^
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f: In function ‘readdata’:
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4847:0: warning: ‘nint’ may be used uninitialized in this function [-Wmaybe-uninitialized]
- tlow=temp(nint)
- ^
- b'Unknown vendor: "gfortran"\nrunning build\nrunning config_cc\nunifing config_cc, config, build_clib, build_ext, build commands --compiler options\nrunning config_fc\nunifing config_fc, config, build_clib, build_ext, build commands --fcompiler options\nrunning build_src\nbuild_src\nbuilding extension "radex" sources\nf2py options: []\nf2py:> /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radexmodule.c\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7\nReading fortran codes...\n\tReading file \'/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f\' (format:fix,strict)\n\tReading file \'radex.inc\' (format:fix)\nLine #25 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer niter ! iteration counter"\n\tupdatevars: could not crack entity declaration "niter!". Ignoring.\nLine #26 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer imore ! are we running again?"\n\tupdatevars: could not crack entity declaration "imore!". Ignoring.\nLine #26 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer imore ! are we running again?"\n\tupdatevars: could not crack entity declaration "again?". Ignoring.\nLine #29 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" logical conv ! are we converged?"\n\tupdatevars: could not crack entity declaration "conv!". Ignoring.\nLine #29 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" logical conv ! are we converged?"\n\tupdatevars: attempt to change the type of "are" ("integer") to "logical". Ignoring.\nLine #29 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" logical conv ! are we converged?"\n\tupdatevars: attempt to change the type of "we" ("integer") to "logical". Ignoring.\nLine #29 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" logical conv ! are we converged?"\n\tupdatevars: could not crack entity declaration "converged?". Ignoring.\n\tReading file \'radex.inc\' (format:fix)\n\tReading file \'radex.inc\' (format:fix)\n\tReading file \'radex.inc\' (format:fix)\nLine #3992 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer niter ! iteration counter"\n\tupdatevars: could not crack entity declaration "niter!". Ignoring.\nLine #3993 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer ilev,jlev,klev ! to loop over energy levels"\n\tupdatevars: could not crack entity declaration "klev!". Ignoring.\nLine #3994 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer nplus ! to solve statistical equilibrium"\n\tupdatevars: could not crack entity declaration "nplus!". Ignoring.\nLine #3995 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer iline ! to loop over lines"\n\tupdatevars: could not crack entity declaration "iline!". Ignoring.\nLine #3996 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer m,n ! line upper/lower levels"\n\tupdatevars: could not crack entity declaration "n!". Ignoring.\nLine #3996 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer m,n ! line upper/lower levels"\n\tupdatevars: could not crack entity declaration "upper/lower". Ignoring.\nLine #3997 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer nthick ! counts optically thick lines"\n\tupdatevars: could not crack entity declaration "nthick!". Ignoring.\nLine #3998 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer nfat ! counts highly optically thick lines"\n\tupdatevars: could not crack entity declaration "nfat!". Ignoring.\nLine #3999 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer nreduce ! size of reduced rate matrix"\n\tupdatevars: could not crack entity declaration "nreduce!". Ignoring.\nLine #4001 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer indx,dsign ! needed for NumRep equation solver"\n\tupdatevars: could not crack entity declaration "dsign!". Ignoring.\nLine #4002 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 rhs(maxlev) ! RHS of rate equation"\n\tupdatevars: could not crack entity declaration "rhs(maxlev)!". Ignoring.\nLine #4002 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 rhs(maxlev) ! RHS of rate equation"\n\tupdatevars: attempt to change the type of "of" ("integer") to "real". Ignoring.\nLine #4002 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 rhs(maxlev) ! RHS of rate equation"\n\tupdatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.\nLine #4002 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 rhs(maxlev) ! RHS of rate equation"\n\tupdatevars: attempt to change the type of "equation" ("integer") to "real". Ignoring.\nLine #4004 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 yrate(maxlev,maxlev) ! rate matrix"\n\tupdatevars: could not crack entity declaration "yrate(maxlev,maxlev)!". Ignoring.\nLine #4004 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 yrate(maxlev,maxlev) ! rate matrix"\n\tupdatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.\nLine #4004 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 yrate(maxlev,maxlev) ! rate matrix"\n\tupdatevars: attempt to change the type of "matrix" ("integer") to "real". Ignoring.\nLine #4005 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 etr,exr ! to calculate radiative rates"\n\tupdatevars: could not crack entity declaration "exr!". Ignoring.\nLine #4005 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 etr,exr ! to calculate radiative rates"\n\tupdatevars: attempt to change the type of "to" ("integer") to "real". Ignoring.\nLine #4006 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 xt ! frequency cubed"\n\tupdatevars: could not crack entity declaration "xt!". Ignoring.\nLine #4007 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 hnu ! photon energy"\n\tupdatevars: could not crack entity declaration "hnu!". Ignoring.\nLine #4007 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 hnu ! photon energy"\n\tupdatevars: attempt to change the type of "energy" ("integer") to "real". Ignoring.\nLine #4008 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 bnutex ! line source function"\n\tupdatevars: could not crack entity declaration "bnutex!". Ignoring.\nLine #4008 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 bnutex ! line source function"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\nLine #4009 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 cddv ! N(mol) / delta V"\n\tupdatevars: could not crack entity declaration "cddv!". Ignoring.\nLine #4009 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 cddv ! N(mol) / delta V"\n\tupdatevars: attempt to change the type of "n" ("integer") to "real". Ignoring.\nLine #4009 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 cddv ! N(mol) / delta V"\n\tupdatevars: could not crack entity declaration "n(mol)/delta". Ignoring.\nLine #4010 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 beta,escprob ! escape probability"\n\tupdatevars: could not crack entity declaration "escprob!". Ignoring.\nLine #4012 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 bnu ! Planck function"\n\tupdatevars: could not crack entity declaration "bnu!". Ignoring.\nLine #4013 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 uarray(maxlev,maxlev) ! reduced rate matrix"\n\tupdatevars: could not crack entity declaration "uarray(maxlev,maxlev)!". Ignoring.\nLine #4013 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 uarray(maxlev,maxlev) ! reduced rate matrix"\n\tupdatevars: attempt to change the type of "reduced" ("integer") to "real". Ignoring.\nLine #4013 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 uarray(maxlev,maxlev) ! reduced rate matrix"\n\tupdatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.\nLine #4013 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 uarray(maxlev,maxlev) ! reduced rate matrix"\n\tupdatevars: attempt to change the type of "matrix" ("integer") to "real". Ignoring.\nLine #4014 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 redcrit ! reduction criterion"\n\tupdatevars: could not crack entity declaration "redcrit!". Ignoring.\nLine #4015 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 sumx ! summed radiative rate"\n\tupdatevars: could not crack entity declaration "sumx!". Ignoring.\nLine #4015 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 sumx ! summed radiative rate"\n\tupdatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.\nLine #4016 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 total ! to normalize populations"\n\tupdatevars: could not crack entity declaration "total!". Ignoring.\nLine #4016 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 total ! to normalize populations"\n\tupdatevars: attempt to change the type of "to" ("integer") to "real". Ignoring.\nLine #4018 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 tsum,thistex ! to check convergence"\n\tupdatevars: could not crack entity declaration "thistex!". Ignoring.\nLine #4018 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 tsum,thistex ! to check convergence"\n\tupdatevars: attempt to change the type of "to" ("integer") to "real". Ignoring.\nLine #4021 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" logical conv ! are we converged?"\n\tupdatevars: could not crack entity declaration "conv!". Ignoring.\nLine #4021 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" logical conv ! are we converged?"\n\tupdatevars: could not crack entity declaration "converged?". Ignoring.\n\tReading file \'radex.inc\' (format:fix)\nLine #4296 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 taur !optical radius"\n\tupdatevars: could not crack entity declaration "taur!optical". Ignoring.\n\tReading file \'radex.inc\' (format:fix)\nLine #4365 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer length ! subroutine to determine"\n\tupdatevars: could not crack entity declaration "length!". Ignoring.\nLine #4367 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer ipart ! loop over collision partners"\n\tupdatevars: could not crack entity declaration "ipart!". Ignoring.\nLine #4368 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" character*10 partner ! name of collision partner"\n\tupdatevars: no name pattern found for entity=\'!\'. Skipping.\nLine #4368 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" character*10 partner ! name of collision partner"\n\tupdatevars: attempt to change the type of "collision" ("integer") to "character". Ignoring.\nLine #4371 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer id ! ID code of collision partner"\n\tupdatevars: could not crack entity declaration "id!". Ignoring.\nLine #4371 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer id ! ID code of collision partner"\n\tupdatevars: attempt to change the type of "of" ("character") to "integer". Ignoring.\nLine #4371 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer id ! ID code of collision partner"\n\tupdatevars: attempt to change the type of "partner" ("character") to "integer". Ignoring.\n\tReading file \'radex.inc\' (format:fix)\nLine #4503 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer ipart ! to loop over collision partners"\n\tupdatevars: could not crack entity declaration "ipart!". Ignoring.\n\tReading file \'radex.inc\' (format:fix)\nLine #4542 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer iline ! to loop over lines"\n\tupdatevars: could not crack entity declaration "iline!". Ignoring.\nLine #4543 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer m,n ! upper & lower level of the line"\n\tupdatevars: could not crack entity declaration "n!". Ignoring.\nLine #4543 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer m,n ! upper & lower level of the line"\n\tupdatevars: no name pattern found for entity=\'&\'. Skipping.\nLine #4545 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer niter ! final number of iterations"\n\tupdatevars: could not crack entity declaration "niter!". Ignoring.\nLine #4549 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 xt ! frequency cubed"\n\tupdatevars: could not crack entity declaration "xt!". Ignoring.\nLine #4550 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 hnu ! photon energy"\n\tupdatevars: could not crack entity declaration "hnu!". Ignoring.\nLine #4551 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 bnutex ! line source function"\n\tupdatevars: could not crack entity declaration "bnutex!". Ignoring.\nLine #4551 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 bnutex ! line source function"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\nLine #4552 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 ftau ! exp(-tau)"\n\tupdatevars: could not crack entity declaration "ftau!". Ignoring.\nLine #4553 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 toti ! background intensity"\n\tupdatevars: could not crack entity declaration "toti!". Ignoring.\nLine #4554 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 tbl ! black body temperature"\n\tupdatevars: could not crack entity declaration "tbl!". Ignoring.\nLine #4555 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 wh ! Planck correction"\n\tupdatevars: could not crack entity declaration "wh!". Ignoring.\nLine #4556 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 tback ! background temperature"\n\tupdatevars: could not crack entity declaration "tback!". Ignoring.\nLine #4557 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 ta ! line antenna temperature"\n\tupdatevars: could not crack entity declaration "ta!". Ignoring.\nLine #4557 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 ta ! line antenna temperature"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\nLine #4558 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 tr ! line radiation temperature"\n\tupdatevars: could not crack entity declaration "tr!". Ignoring.\nLine #4558 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 tr ! line radiation temperature"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\nLine #4559 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 beta,escprob ! escape probability"\n\tupdatevars: no name pattern found for entity=\'!\'. Skipping.\nLine #4561 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 bnu ! Planck function"\n\tupdatevars: could not crack entity declaration "bnu!". Ignoring.\nLine #4562 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 kkms ! line integrated intensity (K km/s)"\n\tupdatevars: could not crack entity declaration "kkms!". Ignoring.\nLine #4562 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 kkms ! line integrated intensity (K km/s)"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\nLine #4563 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 ergs ! line flux (erg / s / cm^2)"\n\tupdatevars: could not crack entity declaration "ergs!". Ignoring.\nLine #4563 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 ergs ! line flux (erg / s / cm^2)"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\nLine #4568 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 wavel ! line wavelength (micron)"\n\tupdatevars: could not crack entity declaration "wavel!". Ignoring.\nLine #4568 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 wavel ! line wavelength (micron)"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\n\tReading file \'radex.inc\' (format:fix)\nLine #4718 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer ilev,jlev ! to loop over energy levels"\n\tupdatevars: could not crack entity declaration "jlev!". Ignoring.\nLine #4719 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer iline ! to loop over lines"\n\tupdatevars: could not crack entity declaration "iline!". Ignoring.\nLine #4720 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer ipart,jpart ! to loop over collision partners"\n\tupdatevars: no name pattern found for entity=\'!\'. Skipping.\nLine #4721 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer itemp ! to loop over collision temperatures"\n\tupdatevars: could not crack entity declaration "itemp!". Ignoring.\nLine #4722 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer icoll ! to loop over collisional transitions"\n\tupdatevars: could not crack entity declaration "icoll!". Ignoring.\nLine #4724 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer dummy ! to skip part of the file"\n\tupdatevars: could not crack entity declaration "dummy!". Ignoring.\nLine #4727 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" integer id(maxpart) ! to identify collision partners"\n\tupdatevars: could not crack entity declaration "id(maxpart)!". Ignoring.\nLine #4733 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 temp(maxtemp) ! collision temperatures"\n\tupdatevars: could not crack entity declaration "temp(maxtemp)!". Ignoring.\nLine #4733 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 temp(maxtemp) ! collision temperatures"\n\tupdatevars: attempt to change the type of "collision" ("integer") to "real". Ignoring.\nLine #4733 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" real*8 temp(maxtemp) ! collision temperatures"\n\tupdatevars: attempt to change the type of "temperatures" ("integer") to "real". Ignoring.\nLine #4736 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" character*120 collref ! text about source of collisional data"\n\tupdatevars: no name pattern found for entity=\'!\'. Skipping.\nLine #4736 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" character*120 collref ! text about source of collisional data"\n\tupdatevars: attempt to change the type of "of" ("integer") to "character". Ignoring.\nLine #4736 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:" character*120 collref ! text about source of collisional data"\n\tupdatevars: attempt to change the type of "collisional" ("integer") to "character". Ignoring.\nPost-processing...\n\tBlock: radex\n\t\t\tBlock: radex\n\t\t\tBlock: backrad\n\t\t\tBlock: galbr\n\t\t\tBlock: splcoeff\n\t\t\tBlock: splintrp\n\t\t\tBlock: ludcmp\n\t\t\tBlock: lubksb\n\t\t\tBlock: sgeir\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:r1mach\nvars2fortran: No typespec for argument "i".\n\t\t\tBlock: r1mach\n\t\t\tBlock: sasum\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:scopy\nvars2fortran: No typespec for argument "n".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:scopy\nvars2fortran: No typespec for argument "incx".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:scopy\nvars2fortran: No typespec for argument "incy".\n\t\t\tBlock: scopy\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:sdsdot\nvars2fortran: No typespec for argument "n".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:sdsdot\nvars2fortran: No typespec for argument "incx".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:sdsdot\nvars2fortran: No typespec for argument "incy".\n\t\t\tBlock: sdsdot\n\t\t\tBlock: sgefa\n\t\t\tBlock: isamax\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:saxpy\nvars2fortran: No typespec for argument "n".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:saxpy\nvars2fortran: No typespec for argument "incx".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:saxpy\nvars2fortran: No typespec for argument "incy".\n\t\t\tBlock: saxpy\n\t\t\tBlock: sscal\n\t\t\tBlock: sgesl\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:sdot\nvars2fortran: No typespec for argument "n".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:sdot\nvars2fortran: No typespec for argument "incx".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:sdot\nvars2fortran: No typespec for argument "incy".\n\t\t\tBlock: sdot\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xermsg\nvars2fortran: No typespec for argument "nerr".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xermsg\nvars2fortran: No typespec for argument "level".\n\t\t\tBlock: xermsg\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:j4save\nvars2fortran: No typespec for argument "iwhich".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:j4save\nvars2fortran: No typespec for argument "ivalue".\n\t\t\tBlock: j4save\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xercnt\nvars2fortran: No typespec for argument "nerr".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xercnt\nvars2fortran: No typespec for argument "level".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xercnt\nvars2fortran: No typespec for argument "kontrl".\n\t\t\tBlock: xercnt\n\t\t\tBlock: xerhlt\n\t\t\tBlock: xerprn\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:i1mach\nvars2fortran: No typespec for argument "i".\n\t\t\tBlock: i1mach\n{\'attrspec\': [\'dimension(5)\']}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xgetua\nvars2fortran: No typespec for argument "iunita".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xgetua\nvars2fortran: No typespec for argument "n".\n\t\t\tBlock: xgetua\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xersve\nvars2fortran: No typespec for argument "kflag".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xersve\nvars2fortran: No typespec for argument "nerr".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xersve\nvars2fortran: No typespec for argument "level".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xersve\nvars2fortran: No typespec for argument "icount".\n\t\t\tBlock: xersve\n\t\t\tBlock: fdump\n\t\t\tBlock: matrix\n\t\t\tBlock: escprob\n\t\t\tBlock: getinputs\n\t\t\tBlock: defaults\n\t\t\tBlock: length\n\t\t\tBlock: output\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:output\n\tgetarrlen:variable "micron" undefined\n\t\t\tBlock: readdata\nPost-processing (stage 2)...\nBuilding modules...\n\tBuilding module "radex"...\n\t\tConstructing wrapper function "backrad"...\n\t\t backrad()\n\t\tConstructing wrapper function "galbr"...\n\t\t galbr()\n\t\tConstructing wrapper function "splcoeff"...\n\t\t splcoeff(x,f,n,fp1,fpn,fpp)\n\t\tConstructing wrapper function "splintrp"...\n\t\t splintrp(xin,fin,fppin,x,fout,[n])\n\t\tConstructing wrapper function "ludcmp"...\n\t\t ludcmp(a,indx,d,[n,np])\n\t\tConstructing wrapper function "lubksb"...\n\t\t lubksb(a,n,indx,b,[np])\n\t\tConstructing wrapper function "sgeir"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t sgeir(a,v,itask,ind,work,iwork,[lda,n])\n\t\tCreating wrapper for Fortran function "r1mach"("r1mach")...\n\t\tConstructing wrapper function "r1mach"...\n\t\t r1mach = r1mach(i)\n\t\tCreating wrapper for Fortran function "sasum"("sasum")...\n\t\tConstructing wrapper function "sasum"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t sasum = sasum(n,sx,incx)\n\t\tConstructing wrapper function "scopy"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t scopy(n,sx,incx,sy,incy)\n\t\tCreating wrapper for Fortran function "sdsdot"("sdsdot")...\n\t\tConstructing wrapper function "sdsdot"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t sdsdot = sdsdot(n,sb,sx,incx,sy,incy)\n\t\tConstructing wrapper function "sgefa"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t sgefa(a,n,ipvt,info,[lda])\n\t\tCreating wrapper for Fortran function "isamax"("isamax")...\n\t\tConstructing wrapper function "isamax"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t isamax = isamax(n,sx,incx)\n\t\tConstructing wrapper function "saxpy"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t saxpy(n,sa,sx,incx,sy,incy)\n\t\tConstructing wrapper function "sscal"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t sscal(n,sa,sx,incx)\n\t\tConstructing wrapper function "sgesl"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t sgesl(a,n,ipvt,b,job,[lda])\n\t\tCreating wrapper for Fortran function "sdot"("sdot")...\n\t\tConstructing wrapper function "sdot"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t sdot = sdot(n,sx,incx,sy,incy)\n\t\tConstructing wrapper function "xermsg"...\n\t\t xermsg(librar,subrou,messg,nerr,level)\n\t\tCreating wrapper for Fortran function "j4save"("j4save")...\n\t\tConstructing wrapper function "j4save"...\n\t\t j4save = j4save(iwhich,ivalue,iset)\n\t\tConstructing wrapper function "xercnt"...\n\t\t xercnt(librar,subrou,messg,nerr,level,kontrl)\n\t\tConstructing wrapper function "xerhlt"...\n\t\t xerhlt(messg)\n\t\tConstructing wrapper function "xerprn"...\n\t\t xerprn(prefix,npref,messg,nwrap)\n\t\tCreating wrapper for Fortran function "i1mach"("i1mach")...\n\t\tConstructing wrapper function "i1mach"...\n\t\t i1mach = i1mach(i)\n\t\tConstructing wrapper function "xgetua"...\n\t\t xgetua(iunita,n)\n\t\tConstructing wrapper function "xersve"...\n\t\t xersve(librar,subrou,messg,kflag,nerr,level,icount)\n\t\tConstructing wrapper function "fdump"...\n\t\t fdump()\n\t\tConstructing wrapper function "matrix"...\n\t\t matrix(niter,conv)\n\t\tCreating wrapper for Fortran function "escprob"("escprob")...\n\t\tConstructing wrapper function "escprob"...\n\t\t escprob = escprob(tau)\n\t\tConstructing wrapper function "getinputs"...\n\t\t getinputs()\n\t\tConstructing wrapper function "defaults"...\n\t\t defaults()\n\t\tCreating wrapper for Fortran function "length"("length")...\n\t\tConstructing wrapper function "length"...\n\t\t length = length(str)\n\t\tConstructing wrapper function "output"...\n\t\t output(niter)\n\t\tConstructing wrapper function "readdata"...\n\t\t readdata()\n\t\tConstructing COMMON block support for "impex"...\n\t\t outfile,molfile,specref\n\t\tConstructing COMMON block support for "setup"...\n\t\t radat,method,version,logfile\n\t\tConstructing COMMON block support for "imolec"...\n\t\t nlev,nline,ncoll,npart,ntemp,iupp,ilow\n\t\tConstructing COMMON block support for "rmolec"...\n\t\t amass,eterm,gstat,aeinst,eup\n\t\tConstructing COMMON block support for "cphys"...\n\t\t density,tkin,tbg,cdmol,deltav,totdens\n\t\tConstructing COMMON block support for "freq"...\n\t\t fmin,fmax\n\t\tConstructing COMMON block support for "radi"...\n\t\t xnu,taul,tex,backi,totalb,spfreq,trj\n\t\tConstructing COMMON block support for "quant"...\n\t\t qnum\n\t\tConstructing COMMON block support for "collie"...\n\t\t crate,ctot,xpop\n\t\tConstructing COMMON block support for "dbg"...\n\t\t debug\n\tWrote C/API module "radex" to file "/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radexmodule.c"\n\tFortran 77 wrappers are saved to "/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radex-f2pywrappers.f"\n adding \'/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/fortranobject.c\' to sources.\n adding \'/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7\' to include_dirs.\ncopying /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.c -> /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7\ncopying /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.h -> /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7\n adding \'/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radex-f2pywrappers.f\' to sources.\nbuild_src: building npy-pkg config files\nrunning build_ext\ncustomize UnixCCompiler\ncustomize UnixCCompiler using build_ext\ncustomize Gnu95FCompiler\nFound executable /Users/adam/miniconda3/bin/gfortran\ncustomize Gnu95FCompiler using build_ext\nbuilding \'radex\' extension\ncompiling C sources\nC compiler: gcc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/Users/adam/miniconda3/include -arch x86_64 -I/Users/adam/miniconda3/include -arch x86_64\n\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7\ncompile options: \'-I/Users/adam/repos/pyradex/Radex/src -I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7 -I/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include -I/Users/adam/miniconda3/include/python3.7m -c\'\ngcc: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radexmodule.c\ngcc: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/fortranobject.c\ncompiling Fortran sources\nFortran f77 compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -m64 -fPIC -O3 -funroll-loops\nFortran f90 compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -fno-second-underscore -m64 -fPIC -O3 -funroll-loops\nFortran fix compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -m64 -fPIC -O3 -funroll-loops\ncompile options: \'-I/Users/adam/repos/pyradex/Radex/src -I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7 -I/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include -I/Users/adam/miniconda3/include/python3.7m -c\'\ngfortran:f77: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f\ngfortran:f77: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radex-f2pywrappers.f\n/Users/adam/miniconda3/bin/gfortran -Wall -g -m64 -Wall -g -undefined dynamic_lookup -bundle /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radexmodule.o /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/fortranobject.o /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.o /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radex-f2pywrappers.o -L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5 -L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/../../.. -L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/../../.. -lgfortran -o ./radex.cpython-37m-darwin.so\nRemoving build directory /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy\n'
- running install_myradex
- rm ./*.mod ./*.o
- rm: ./*.mod: No such file or directory
- rm: ./*.o: No such file or directory
- make: *** [clean] Error 1
- gfortran -O3 -fPIC -c sub_global_variables.f90
- gfortran -O3 -fPIC -c sub_trivials.f90
- gfortran -O3 -fPIC -c nleq1.f
- gfortran -O3 -fPIC -c linalg_nleq1.f
- linalg_nleq1.f:1513.21:
- CALL XERBLA('DGER ',INFO)
- 1
- Warning: Character length of actual argument shorter than of dummy argument 'srname' (5/6) at (1)
- gfortran -O3 -fPIC -c statistic_equilibrium.f90
- gfortran -O3 -fPIC -c my_radex.f90
- gfortran -O3 -fPIC -c opkda1.f
- opkda1.f:1255.43:
- 1 RWORK(LACOR), IA, JA, RWORK(LWM), RWORK(LWM), IPFLAG, F, JAC)
- 1
- Warning: Type mismatch in argument 'iwk' at (1); passed REAL(8) to INTEGER(4)
- opkda1.f:9498.51:
- 1 RWORK(LACOR), IA, JA, IC, JC, RWORK(LWM), RWORK(LWM), IPFLAG,
- 1
- Warning: Type mismatch in argument 'iwk' at (1); passed REAL(8) to INTEGER(4)
- gfortran -O3 -fPIC -c opkda2.f
- opkda2.f:938.72:
- 10 ASSIGN 30 TO NEXT
- 1
- Warning: Deleted feature: ASSIGN statement at (1)
- opkda2.f:945.19:
- 20 GO TO NEXT,(30, 50, 70, 110)
- 1
- Warning: Deleted feature: Assigned GOTO statement at (1)
- opkda2.f:947.72:
- ASSIGN 50 TO NEXT
- 1
- Warning: Deleted feature: ASSIGN statement at (1)
- opkda2.f:957.72:
- ASSIGN 70 TO NEXT
- 1
- Warning: Deleted feature: ASSIGN statement at (1)
- opkda2.f:963.72:
- ASSIGN 110 TO NEXT
- 1
- Warning: Deleted feature: ASSIGN statement at (1)
- gfortran -O3 -fPIC -c opkdmain.f
- gfortran -O3 -fPIC -c wnorm.f
- gfortran -O3 -fPIC -c zibconst.f
- gfortran -O3 -fPIC -c zibmon.f
- gfortran -O3 -fPIC -c zibsec.f
- f2py -c -m wrapper_my_radex wrapper_for_python.f90 -L my_radex.o opkda1.o opkda2.o opkdmain.o statistic_equilibrium.o sub_global_variables.o sub_trivials.o nleq1.o linalg_nleq1.o wnorm.o zibconst.o zibmon.o zibsec.o
- running build
- running config_cc
- unifing config_cc, config, build_clib, build_ext, build commands --compiler options
- running config_fc
- unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
- running build_src
- build_src
- building extension "wrapper_my_radex" sources
- f2py options: []
- f2py:> /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radexmodule.c
- creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7
- Reading fortran codes...
- Reading file 'wrapper_for_python.f90' (format:free)
- crackline: groupcounter=1 groupname={0: '', 1: 'module', 2: 'interface', 3: 'module', 4: 'subroutine'}
- crackline: Mismatch of blocks encountered. Trying to fix it by assuming "end" statement.
- Post-processing...
- Block: wrapper_my_radex
- Block: myradex_wrapper
- Block: config_basic
- In: :wrapper_my_radex:wrapper_for_python.f90:myradex_wrapper:config_basic
- get_useparameters: no module my_radex info used by config_basic
- Block: run_one_params
- In: :wrapper_my_radex:wrapper_for_python.f90:myradex_wrapper:run_one_params
- get_useparameters: no module my_radex info used by run_one_params
- In: :wrapper_my_radex:wrapper_for_python.f90:myradex_wrapper:run_one_params
- get_useparameters: no module statistic_equilibrium info used by run_one_params
- Post-processing (stage 2)...
- Block: wrapper_my_radex
- Block: unknown_interface
- Block: myradex_wrapper
- Block: config_basic
- Block: run_one_params
- Building modules...
- Building module "wrapper_my_radex"...
- Constructing F90 module support for "myradex_wrapper"...
- Variables: flag_good n_item_column about column_names molecule_name
- Constructing wrapper function "myradex_wrapper.config_basic"...
- n_levels,n_item,n_transitions = config_basic(dir_transition_rates,filename_molecule,tbg,verbose)
- Constructing wrapper function "myradex_wrapper.run_one_params"...
- energies,f_occupations,data_transitions,cooling_rate = run_one_params(tkin,dv_cgs,dens_x_cgs,ncol_x_cgs,h2_density_cgs,hi_density_cgs,oh2_density_cgs,ph2_density_cgs,hii_density_cgs,electron_density_cgs,n_levels,n_item,n_transitions,geotype)
- Wrote C/API module "wrapper_my_radex" to file "/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radexmodule.c"
- Fortran 90 wrappers are saved to "/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radex-f2pywrappers2.f90"
- adding '/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/fortranobject.c' to sources.
- adding '/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7' to include_dirs.
- copying /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.c -> /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7
- copying /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.h -> /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7
- adding '/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radex-f2pywrappers2.f90' to sources.
- build_src: building npy-pkg config files
- running build_ext
- customize UnixCCompiler
- customize UnixCCompiler using build_ext
- get_default_fcompiler: matching types: '['gnu95', 'nag', 'absoft', 'ibm', 'intel', 'gnu', 'g95', 'pg']'
- customize Gnu95FCompiler
- Found executable /Users/adam/miniconda3/bin/gfortran
- customize Gnu95FCompiler
- customize Gnu95FCompiler using build_ext
- building 'wrapper_my_radex' extension
- compiling C sources
- C compiler: gcc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/Users/adam/miniconda3/include -arch x86_64 -I/Users/adam/miniconda3/include -arch x86_64
- creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var
- creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders
- creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r
- creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr
- creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T
- creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5
- creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7
- compile options: '-I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7 -I/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include -I/Users/adam/miniconda3/include/python3.7m -c'
- gcc: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radexmodule.c
- gcc: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/fortranobject.c
- In file included from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:0,
- from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
- from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
- from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/fortranobject.h:13,
- from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radexmodule.c:16:
- /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
- #warning "Using deprecated NumPy API, disable it with " \
- ^
- In file included from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:0,
- from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
- from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
- from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/fortranobject.h:13,
- from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/fortranobject.c:2:
- /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
- #warning "Using deprecated NumPy API, disable it with " \
- ^
- /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radexmodule.c:134:12: warning: ‘f2py_size’ defined but not used [-Wunused-function]
- static int f2py_size(PyArrayObject* var, ...)
- ^
- compiling Fortran 90 module sources
- Fortran f77 compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -m64 -fPIC -O3 -funroll-loops
- Fortran f90 compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -fno-second-underscore -m64 -fPIC -O3 -funroll-loops
- Fortran fix compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -m64 -fPIC -O3 -funroll-loops
- compile options: '-I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7 -I/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include -I/Users/adam/miniconda3/include/python3.7m -c'
- extra options: '-J/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/ -I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/'
- gfortran:f90: wrapper_for_python.f90
- compiling Fortran sources
- Fortran f77 compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -m64 -fPIC -O3 -funroll-loops
- Fortran f90 compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -fno-second-underscore -m64 -fPIC -O3 -funroll-loops
- Fortran fix compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -m64 -fPIC -O3 -funroll-loops
- compile options: '-I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7 -I/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include -I/Users/adam/miniconda3/include/python3.7m -c'
- extra options: '-J/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/ -I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/'
- gfortran:f90: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radex-f2pywrappers2.f90
- /Users/adam/miniconda3/bin/gfortran -Wall -g -m64 -Wall -g -undefined dynamic_lookup -bundle /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radexmodule.o /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/fortranobject.o /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/wrapper_for_python.o /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radex-f2pywrappers2.o my_radex.o opkda1.o opkda2.o opkdmain.o statistic_equilibrium.o sub_global_variables.o sub_trivials.o nleq1.o linalg_nleq1.o wnorm.o zibconst.o zibmon.o zibsec.o -L -L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5 -L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/../../.. -L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/../../.. -lgfortran -o ./wrapper_my_radex.cpython-37m-darwin.so
- ld: warning: directory not found for option '-L-L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5'
- Removing build directory /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5
- make: `sub_trivials.o' is up to date.
- rm ./*.mod ./*.o
- running build
- running build_py
- creating build
- creating build/lib
- creating build/lib/pyradex
- copying pyradex/version.py -> build/lib/pyradex
- copying pyradex/base_class.py -> build/lib/pyradex
- copying pyradex/__init__.py -> build/lib/pyradex
- copying pyradex/core.py -> build/lib/pyradex
- copying pyradex/read_radex.py -> build/lib/pyradex
- copying pyradex/utils.py -> build/lib/pyradex
- copying pyradex/grid_wrapper.py -> build/lib/pyradex
- copying pyradex/despotic_interface.py -> build/lib/pyradex
- copying pyradex/synthspec.py -> build/lib/pyradex
- creating build/lib/pyradex/radex
- copying pyradex/radex/__init__.py -> build/lib/pyradex/radex
- creating build/lib/pyradex/tests
- copying pyradex/tests/test_fjdu.py -> build/lib/pyradex/tests
- copying pyradex/tests/test_grid.py -> build/lib/pyradex/tests
- copying pyradex/tests/__init__.py -> build/lib/pyradex/tests
- copying pyradex/tests/test_synthspec.py -> build/lib/pyradex/tests
- copying pyradex/tests/test_radex.py -> build/lib/pyradex/tests
- copying pyradex/tests/test_radex_myradex_consistency.py -> build/lib/pyradex/tests
- copying pyradex/tests/test_radex_install.py -> build/lib/pyradex/tests
- copying pyradex/tests/setup_package_data.py -> build/lib/pyradex/tests
- creating build/lib/pyradex/fjdu
- copying pyradex/fjdu/__init__.py -> build/lib/pyradex/fjdu
- copying pyradex/fjdu/core.py -> build/lib/pyradex/fjdu
- copying pyradex/radex/radex.so -> build/lib/pyradex/radex
- creating build/lib/pyradex/tests/data
- copying pyradex/tests/data/example.out -> build/lib/pyradex/tests/data
- warning: build_py: byte-compiling is disabled, skipping.
- running install
- running install_lib
- copying build/lib/pyradex/radex/radex.so -> /Users/adam/miniconda3/lib/python3.7/site-packages/pyradex/radex
- warning: install_lib: byte-compiling is disabled, skipping.
- running install_egg_info
- Removing /Users/adam/miniconda3/lib/python3.7/site-packages/pyradex-0.4.2dev-py3.7.egg-info
- Writing /Users/adam/miniconda3/lib/python3.7/site-packages/pyradex-0.4.2dev-py3.7.egg-info
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