DataMining.java with Player class

// Why does naive bayes classifier favor datasets with high bias and low variance

import java.io.BufferedReader;
import java.io.FileReader;
import java.io.IOException;
import java.util.*;

/**
 * Created by admin on 11/30/2015.
 */
/*
#RB = Running Back
#OL = Outside Linebacker
#WR = Wide Receiver
#TE = Tight End
#FB = Full Back **************** merged with RB
#DB = Defensive Back
#QB = Quarter Back
#LB = Linebacker
#DL = Defensive Lineman
*/
class Player{
    int age;
    int weight;
    int height;
    String position;
    String birthLocation;

    Player(int age, int weight, int height, String position, String birthLocation) {
        this.age =age;
        this.weight =weight;
        this.height =height;
        this.position =position;
        this.birthLocation =birthLocation;
    }
}

public class DataMining {

    //This will hold all of the data, each index will hold a row
    List<String[]> masterList = new ArrayList<>();

    //This holds the List names and the list
    HashMap< String, List> printingMap = new HashMap<>();

    //This holds the List names and the list
    HashMap< String, Double> meanRoles = new HashMap<>();


    List<Player> playerHolder = new ArrayList<>();

    //Lists of ages per section
    List<Integer> allAges = new ArrayList<>();
    List<Integer> fullBackAges = new ArrayList<>();
    List<Integer> outsideLineBackerAges = new ArrayList<>();
    List<Integer> wideReceiverAges = new ArrayList<>();
    List<Integer> tightEndAges = new ArrayList<>();
    List<Integer> defensiveBackAges = new ArrayList<>();
    List<Integer> quarterBackAges = new ArrayList<>();
    List<Integer> lineBackerAges = new ArrayList<>();
    List<Integer> defensiveLinemanAges = new ArrayList<>();
    List<Integer> cleanedUpAges = new ArrayList<>();
    List<Integer> modernAges = new ArrayList<>();

    //Variables for var and std dev
    HashMap<String,Double> varianceResults = new HashMap<>();
    HashMap<String,Double> stdDevResults = new HashMap<>();

    public static void main(String args[]){
        DataMining dm = new DataMining();
        dm.readFile();
        dm.buildAgeList();
        dm.calculateValues();

        dm.getVariance(dm.printingMap, dm.meanRoles);
    }

    public void readFile(){
        String filename= "src/DataSet_DEADNFLPLAYERS.txt";
        //String filename= "src/tester.txt";

        try {
            //read in the .txt file
            BufferedReader br = new BufferedReader(new FileReader(filename));
            String line= null;
            String[] lineArray = {};

            //need to change this, puts it all into index 0 at the moment
            while ((line = br.readLine()) != null) {
                // process the line.
                lineArray = line.split(",");
                masterList.add(lineArray);
            }

        }
        catch(IOException e){

            e.printStackTrace();
        }
    }

    public void buildAgeList(){
        int deathYear;
        int birthYear;
        int age; // deathYear - birthYear
        int weight;
        int height;
        String heightHolder;
        String position;
        String birthLocation;

        //fill lists by using .contains RB, OL, WR etc...
        for(int i=1; i< masterList.size(); i++ ){ //starts at 1 to avoid headers

            String[] currentLine = masterList.get(i);

            deathYear = Integer.parseInt(currentLine[10].replace("\"", "")); //10th element
            birthYear = Integer.parseInt(currentLine[masterList.get(i).length-1].replace("\"", "")); //last element
            age = deathYear - birthYear; // determines the age at death
            allAges.add(age);

            if(currentLine[16].length() == 5 && currentLine[17].length() == 5 ) { // "6'1" "188" 5 charactes each
                heightHolder = currentLine[16].replace("\"", "");
                weight = Integer.parseInt(currentLine[17].replace("\"", ""));
                position = currentLine[8].replace("\"", "");
                birthLocation = currentLine[masterList.get(i).length - 2].replace("\"", "");

                //System.out.println(heightHolder.charAt(0));
                //System.out.println(heightHolder.charAt(2));
                height = Character.getNumericValue(heightHolder.charAt(0)) * 30;
                System.out.println(height);
                height = height + (Character.getNumericValue(heightHolder.charAt(2)) * 2);
                System.out.println(height);
                Player temp = new Player(age, weight, height, position, birthLocation );
                playerHolder.add(temp);
            }


            List<String> tempArray = Arrays.asList(currentLine);

            if(tempArray.contains("\"RB/FB\"")){
                fullBackAges.add(age);
            }
            else if(tempArray.contains("\"OL\"")){
                outsideLineBackerAges.add(age);
            }
            else if(tempArray.contains("\"WR\"")){
                wideReceiverAges.add(age);
            }
            else if(tempArray.contains("\"TE\"")){
                tightEndAges.add(age);
            }
            else if(tempArray.contains("\"DB\"")){
                defensiveBackAges.add(age);
            }
            else if(tempArray.contains("\"QB\"")){
                quarterBackAges.add(age);
            }
            else if(tempArray.contains("\"LB\"")){
                lineBackerAges.add(age);
            }
            else{ // DL
                defensiveLinemanAges.add(age);
            }

            if(age < 80 && age > 50){
                cleanedUpAges.add(age);
            }

            if(birthYear >= 1940){
                modernAges.add(age);
            }
        }

        printingMap.put("ALL AGES", allAges);
        printingMap.put("FULL BACK AGES", fullBackAges);
        printingMap.put("OUTSIDE LINE BACKER AGES", outsideLineBackerAges);
        printingMap.put("WIDE RECEIVER AGES", wideReceiverAges);
        printingMap.put("DEFENSIVE BACK AGES", defensiveBackAges);
        printingMap.put("QUARTER BACK AGES", quarterBackAges);
        printingMap.put("LINE BACKER AGES", lineBackerAges);
        printingMap.put("DEFENSIVE LINEMAN AGES", defensiveLinemanAges);
        printingMap.put("CLEANED UP AGES", cleanedUpAges);
        printingMap.put("MODERN AGES", modernAges);
    }

    public void calculateValues(){
        for(Map.Entry<String, List> entry : printingMap.entrySet() ){
            String key = entry.getKey();
            List value = entry.getValue();

            Collections.sort(value);

            System.out.println("MEAN OF " + key);
            double mean= mean(value);
            System.out.println(mean);
            System.out.println("MODE OF " + key);
            System.out.println(mode(value));
            System.out.println("MEDIAN OF " + key);
            System.out.println(median(value));
            System.out.println("MIDRANGE OF " + key);
            System.out.println(midRange(value));
            System.out.println("---------------------");

            //adds a mean for each role, key is name of list
            meanRoles.put(key, mean);

        }
    }

    public double mean( List value){

        int totalLifeSpan = 0;

        for(int i = 0; i < value.size(); i++) { // get first value
            totalLifeSpan += (int) value.get(i);
        }

        double averageAges = totalLifeSpan / (value.size()-1);
        return averageAges;
    }

    public double mode( List value){

        int popularity= 0;
        int mostPop= 0;
        int mode= 0;
        int currentValue;

        for(int i = 0; i < value.size(); i++) { // get first value
            currentValue = (int)value.get(i);

            for(int j=0; j< value.size(); j++){ // compare to other values in the list
                if(currentValue == (int)value.get(j)){
                    popularity++; // increment the popularity if same
                }

            }
            if(popularity > mostPop) { // if the new value is bigger than the old
                mostPop = popularity;
                mode = (int)value.get(i);
            }
            popularity = 0;
        }
        return((double)mode);
    }

    public int median( List value){

        int lengthOfArray = value.size();
        int middleIndex = lengthOfArray / 2;
        return((int)value.get(middleIndex));
    }

    public double midRange( List value){

        double max = (int) value.get(0);
        double min = (int) value.get(value.size()-1);
        double midrange = (min + max) / 2 ;
        return(midrange);
    }

    public void getVariance(HashMap<String, List> ageList , HashMap<String, Double> meanList){

        for(Map.Entry<String, List> entry : ageList.entrySet() ) {

            int counter=0;
            double totalSum=0;

            String key = entry.getKey(); // name of current list
            List value = entry.getValue(); // current list

            double varRange =(int) value.get(value.size()-1)-(int) value.get(0);

            double currentMean = meanList.get(key);

            for(Object currentAge:value){
                double sqrValue = (int)currentAge-currentMean;
                totalSum += (int)sqrValue^2;
                counter++;
            }
            System.out.println(key + "  :  " + varRange + "  :  " + totalSum / counter);
            varianceResults.put(key,totalSum/counter);

            double standardDeviation = Math.sqrt(totalSum/counter);
            System.out.println(standardDeviation);
            stdDevResults.put(key, standardDeviation);

        }

        System.out.println("----------------------");
        System.out.println(playerHolder);
        System.out.println(playerHolder.size());
        Player temp = playerHolder.get(0);
        System.out.println(temp.age);
        System.out.println(temp.height);
        System.out.println(temp.weight);
        System.out.println(temp.position);
        System.out.println(temp.birthLocation);
    }
}