Advertisement
Guest User

Untitled

a guest
Jan 18th, 2018
78
0
Never
Not a member of Pastebin yet? Sign Up, it unlocks many cool features!
text 1.22 KB | None | 0 0
  1. Traceback (most recent call last):
  2. File "/mnt/home/ian/anaconda2/bin/cactus", line 11, in <module>
  3. load_entry_point('progressiveCactus', 'console_scripts', 'cactus')()
  4. File "/mnt/home/ian/cactus/src/cactus/progressive/cactus_progressive.py", line 449, in main
  5. halID = toil.restart()
  6. File "/mnt/home/ian/toil/src/toil/common.py", line 773, in restart
  7. return self._runMainLoop(rootJobGraph)
  8. File "/mnt/home/ian/toil/src/toil/common.py", line 1018, in _runMainLoop
  9. jobCache=self._jobCache).run()
  10. File "/mnt/home/ian/toil/src/toil/leader.py", line 197, in run
  11. self.innerLoop()
  12. File "/mnt/home/ian/toil/src/toil/leader.py", line 501, in innerLoop
  13. self.checkForDeadlocks()
  14. File "/mnt/home/ian/toil/src/toil/leader.py", line 518, in checkForDeadlocks
  15. totalRunningJobs = len(self.batchSystem.getRunningBatchJobIDs())
  16. File "/mnt/home/ian/toil/src/toil/batchSystems/abstractGridEngineBatchSystem.py", line 379, in getRunningBatchJobIDs
  17. batchIds = self.worker.getRunningJobIDs()
  18. File "/mnt/home/ian/toil/src/toil/batchSystems/hydra.py", line 37, in getRunningJobIDs
  19. currentjobs = dict((str(self.batchJobIDs[x][0]), x) for x in self.runningJobs)
  20. RuntimeError: Set changed size during iteration
Advertisement
Add Comment
Please, Sign In to add comment
Advertisement