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- Traceback (most recent call last):
- File "/mnt/home/ian/anaconda2/bin/cactus", line 11, in <module>
- load_entry_point('progressiveCactus', 'console_scripts', 'cactus')()
- File "/mnt/home/ian/cactus/src/cactus/progressive/cactus_progressive.py", line 449, in main
- halID = toil.restart()
- File "/mnt/home/ian/toil/src/toil/common.py", line 773, in restart
- return self._runMainLoop(rootJobGraph)
- File "/mnt/home/ian/toil/src/toil/common.py", line 1018, in _runMainLoop
- jobCache=self._jobCache).run()
- File "/mnt/home/ian/toil/src/toil/leader.py", line 197, in run
- self.innerLoop()
- File "/mnt/home/ian/toil/src/toil/leader.py", line 501, in innerLoop
- self.checkForDeadlocks()
- File "/mnt/home/ian/toil/src/toil/leader.py", line 518, in checkForDeadlocks
- totalRunningJobs = len(self.batchSystem.getRunningBatchJobIDs())
- File "/mnt/home/ian/toil/src/toil/batchSystems/abstractGridEngineBatchSystem.py", line 379, in getRunningBatchJobIDs
- batchIds = self.worker.getRunningJobIDs()
- File "/mnt/home/ian/toil/src/toil/batchSystems/hydra.py", line 37, in getRunningJobIDs
- currentjobs = dict((str(self.batchJobIDs[x][0]), x) for x in self.runningJobs)
- RuntimeError: Set changed size during iteration
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