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a guest Oct 23rd, 2019 85 Never
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  1. #!/usr/bin/env bash
  2.  
  3. # gerar report com a anotação funciona dos genes anotados
  4.  
  5. for cds_quickgo in quickgo/*.go; do
  6.     gene_id=$(basename $cds_quickgo | cut -d'.' -f1,2)
  7.     go_terms=$(cat $cds_quickgo | tr '\n' ';')
  8.     echo -e $gene_id"\t"$go_terms
  9. done > report.tbl
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