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misnomer001

brahmin.DG sintashta fail (no kangju right)

misnomer001
May 21st, 2022
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  1. qpAdm: parameter file: parqpadm
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: fstatsa.txt
  5. popleft: left
  6. popright: right
  7. details: YES
  8. inbreed: NO
  9. ## qpAdm version: 1520
  10. seed: 1621914944
  11. inbreed set NO
  12. inbreed set NO
  13.  
  14. left pops:
  15. Brahmin.DG
  16. Iran_ShahrISokhta_BA2
  17. Russia_MLBA_Sintashta
  18. Irula.DG
  19.  
  20. right pops:
  21. Mbuti.DG
  22. CHG
  23. Mongolia_North_N
  24. Serbia_IronGates_Mesolithic
  25. Iran_GanjDareh_N
  26. EHG
  27. WSHG
  28. Tarim_EMBA1
  29. ONG.SG
  30. Uzbekistan_Bustan_BA
  31.  
  32. codimension 1
  33. f4info:
  34. f4rank: 2 dof: 7 chisq: 15.042 tail: 0.0354685151 dofdiff: 9 chisqdiff: -15.042 taildiff: 1
  35. B:
  36. scale 1.000 1.000
  37. CHG 0.844 0.579
  38. Mongolia_North_N -0.288 -0.127
  39. Serbia_IronGates_Mesolithic 1.832 -1.533
  40. Iran_GanjDareh_N 0.384 1.910
  41. EHG 1.503 -0.848
  42. WSHG 1.042 0.062
  43. Tarim_EMBA1 0.770 -0.027
  44. ONG.SG -0.625 -0.537
  45. Uzbekistan_Bustan_BA 0.611 1.281
  46. A:
  47. scale 301.160 1197.350
  48. Iran_ShahrISokhta_BA2 0.146 1.273
  49. Russia_MLBA_Sintashta 1.600 -0.343
  50. Irula.DG -0.648 -1.123
  51.  
  52.  
  53. full rank
  54. f4info:
  55. f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 7 chisqdiff: 15.042 taildiff: 0.0354685151
  56. B:
  57. scale 923.852 186.675 445.924
  58. CHG 0.724 0.763 -1.221
  59. Mongolia_North_N 0.164 -0.213 0.556
  60. Serbia_IronGates_Mesolithic -0.493 1.920 -1.032
  61. Iran_GanjDareh_N 2.139 0.293 -1.107
  62. EHG -0.173 1.533 -1.130
  63. WSHG 0.535 1.035 -1.009
  64. Tarim_EMBA1 -0.003 0.722 -0.902
  65. ONG.SG -0.850 -0.599 0.767
  66. Uzbekistan_Bustan_BA 1.611 0.547 -1.101
  67. A:
  68. scale 1.732 1.732 1.732
  69. Iran_ShahrISokhta_BA2 1.732 0.000 0.000
  70. Russia_MLBA_Sintashta 0.000 1.732 0.000
  71. Irula.DG 0.000 0.000 1.732
  72.  
  73.  
  74. best coefficients: 0.424 0.139 0.438
  75. totmean: 0.424 0.139 0.438
  76. boot mean: 0.424 0.139 0.437
  77. std. errors: 0.041 0.017 0.036
  78.  
  79. error covariance (* 1,000,000)
  80. 1711 -368 -1343
  81. -368 286 81
  82. -1343 81 1262
  83.  
  84.  
  85. summ: Brahmin.DG 3 0.035469 0.424 0.139 0.437 1711 -368 -1343 286 81 ...
  86. 1262
  87.  
  88. fixed pat wt dof chisq tail prob
  89. 000 0 7 15.042 0.0354685 0.424 0.139 0.438
  90. 001 1 8 144.459 2.80138e-27 0.908 0.092 0.000
  91. 010 1 8 78.847 8.34003e-14 0.595 0.000 0.405
  92. 100 1 8 108.499 7.7439e-20 0.000 0.222 0.778
  93. 011 2 9 167.307 0 1.000 0.000 0.000
  94. 101 2 9 2128.428 0 0.000 1.000 0.000
  95. 110 2 9 244.957 0 0.000 0.000 1.000
  96. best pat: 000 0.0354685 - -
  97. best pat: 010 8.34003e-14 chi(nested): 63.805 p-value for nested model: 1.37349e-15
  98. best pat: 011 2.24494e-31 chi(nested): 88.460 p-value for nested model: 5.1881e-21
  99.  
  100. coeffs: 0.424 0.139 0.438
  101.  
  102. ## dscore:: f_4(Base, Fit, Rbase, right2)
  103. ## genstat:: f_4(Base, Fit, right1, right2)
  104.  
  105. details: Iran_ShahrISokhta_BA2 CHG 0.000783 2.249934
  106. details: Russia_MLBA_Sintashta CHG 0.004087 12.951660
  107. details: Irula.DG CHG -0.002739 -7.371678
  108. dscore: CHG f4: -0.000300 Z: -0.999802
  109.  
  110. details: Iran_ShahrISokhta_BA2 Mongolia_North_N 0.000177 0.526339
  111. details: Russia_MLBA_Sintashta Mongolia_North_N -0.001140 -4.009608
  112. details: Irula.DG Mongolia_North_N 0.001246 3.525003
  113. dscore: Mongolia_North_N f4: 0.000462 Z: 1.613792
  114.  
  115. details: Iran_ShahrISokhta_BA2 Serbia_IronGates_Mesolithic -0.000533 -1.710728
  116. details: Russia_MLBA_Sintashta Serbia_IronGates_Mesolithic 0.010286 34.971658
  117. details: Irula.DG Serbia_IronGates_Mesolithic -0.002315 -7.142259
  118. dscore: Serbia_IronGates_Mesolithic f4: 0.000189 Z: 0.711255
  119.  
  120. details: Iran_ShahrISokhta_BA2 Iran_GanjDareh_N 0.002315 7.553190
  121. details: Russia_MLBA_Sintashta Iran_GanjDareh_N 0.001570 5.799971
  122. details: Irula.DG Iran_GanjDareh_N -0.002482 -8.085200
  123. dscore: Iran_GanjDareh_N f4: 0.000112 Z: 0.440270
  124.  
  125. details: Iran_ShahrISokhta_BA2 EHG -0.000187 -0.538725
  126. details: Russia_MLBA_Sintashta EHG 0.008212 25.601776
  127. details: Irula.DG EHG -0.002533 -7.207568
  128. dscore: EHG f4: -0.000048 Z: -0.165350
  129.  
  130. details: Iran_ShahrISokhta_BA2 WSHG 0.000579 1.522220
  131. details: Russia_MLBA_Sintashta WSHG 0.005545 16.737383
  132. details: Irula.DG WSHG -0.002263 -6.212956
  133. dscore: WSHG f4: 0.000024 Z: 0.078593
  134.  
  135. details: Iran_ShahrISokhta_BA2 Tarim_EMBA1 -0.000004 -0.009547
  136. details: Russia_MLBA_Sintashta Tarim_EMBA1 0.003867 12.047408
  137. details: Irula.DG Tarim_EMBA1 -0.002023 -5.601033
  138. dscore: Tarim_EMBA1 f4: -0.000350 Z: -1.153086
  139.  
  140. details: Iran_ShahrISokhta_BA2 ONG.SG -0.000920 -2.809411
  141. details: Russia_MLBA_Sintashta ONG.SG -0.003208 -11.225352
  142. details: Irula.DG ONG.SG 0.001720 5.086146
  143. dscore: ONG.SG f4: -0.000082 Z: -0.298099
  144.  
  145. details: Iran_ShahrISokhta_BA2 Uzbekistan_Bustan_BA 0.001744 5.652355
  146. details: Russia_MLBA_Sintashta Uzbekistan_Bustan_BA 0.002929 11.101684
  147. details: Irula.DG Uzbekistan_Bustan_BA -0.002469 -7.979690
  148. dscore: Uzbekistan_Bustan_BA f4: 0.000065 Z: 0.251316
  149.  
  150. gendstat: Mbuti.DG CHG -1.000
  151. gendstat: Mbuti.DG Mongolia_North_N 1.614
  152. gendstat: Mbuti.DG Serbia_IronGates_Mesolithic 0.711
  153. gendstat: Mbuti.DG Iran_GanjDareh_N 0.440
  154. gendstat: Mbuti.DG EHG -0.165
  155. gendstat: Mbuti.DG WSHG 0.079
  156. gendstat: Mbuti.DG Tarim_EMBA1 -1.153
  157. gendstat: Mbuti.DG ONG.SG -0.298
  158. gendstat: Mbuti.DG Uzbekistan_Bustan_BA 0.251
  159. gendstat: CHG Mongolia_North_N 2.362
  160. gendstat: CHG Serbia_IronGates_Mesolithic 1.794
  161. gendstat: CHG Iran_GanjDareh_N 1.569
  162. gendstat: CHG EHG 0.835
  163. gendstat: CHG WSHG 0.963
  164. gendstat: CHG Tarim_EMBA1 -0.157
  165. gendstat: CHG ONG.SG 0.648
  166. gendstat: CHG Uzbekistan_Bustan_BA 1.455
  167. gendstat: Mongolia_North_N Serbia_IronGates_Mesolithic -1.024
  168. gendstat: Mongolia_North_N Iran_GanjDareh_N -1.211
  169. gendstat: Mongolia_North_N EHG -1.745
  170. gendstat: Mongolia_North_N WSHG -1.427
  171. gendstat: Mongolia_North_N Tarim_EMBA1 -2.897
  172. gendstat: Mongolia_North_N ONG.SG -2.128
  173. gendstat: Mongolia_North_N Uzbekistan_Bustan_BA -1.440
  174. gendstat: Serbia_IronGates_Mesolithic Iran_GanjDareh_N -0.307
  175. gendstat: Serbia_IronGates_Mesolithic EHG -1.089
  176. gendstat: Serbia_IronGates_Mesolithic WSHG -0.589
  177. gendstat: Serbia_IronGates_Mesolithic Tarim_EMBA1 -2.043
  178. gendstat: Serbia_IronGates_Mesolithic ONG.SG -0.931
  179. gendstat: Serbia_IronGates_Mesolithic Uzbekistan_Bustan_BA -0.553
  180. gendstat: Iran_GanjDareh_N EHG -0.567
  181. gendstat: Iran_GanjDareh_N WSHG -0.286
  182. gendstat: Iran_GanjDareh_N Tarim_EMBA1 -1.584
  183. gendstat: Iran_GanjDareh_N ONG.SG -0.672
  184. gendstat: Iran_GanjDareh_N Uzbekistan_Bustan_BA -0.241
  185. gendstat: EHG WSHG 0.267
  186. gendstat: EHG Tarim_EMBA1 -1.226
  187. gendstat: EHG ONG.SG -0.104
  188. gendstat: EHG Uzbekistan_Bustan_BA 0.433
  189. gendstat: WSHG Tarim_EMBA1 -1.576
  190. gendstat: WSHG ONG.SG -0.322
  191. gendstat: WSHG Uzbekistan_Bustan_BA 0.139
  192. gendstat: Tarim_EMBA1 ONG.SG 0.856
  193. gendstat: Tarim_EMBA1 Uzbekistan_Bustan_BA 1.546
  194. gendstat: ONG.SG Uzbekistan_Bustan_BA 0.513
  195.  
  196. ##end of qpAdm: 5.446 seconds cpu 0.811 Mbytes in use
  197.  
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