LaTeX log custom image

Running with gitlab-runner 12.3.0-rc1 (afb9fab4)
  on docker-auto-scale 72989761
Using Docker executor with image kombustor/texlive ...
Pulling docker image kombustor/texlive ...
Using docker image sha256:0991ad5dcff5dcb6b39eb47abdc1cecf4937d34c59781393dc1590fea03140a9 for kombustor/texlive ...
Running on runner-72989761-project-14328344-concurrent-0 via runner-72989761-srm-1569075211-f277ef1f...
Fetching changes with git depth set to 50...
Initialized empty Git repository in /builds/fschliski/bachelor-thesis/.git/
Created fresh repository.
From https://gitlab.com/fschliski/bachelor-thesis
 * [new branch]      master     -> origin/master
Checking out abb4f586 as master...

Skipping Git submodules setup
$ cd thesis
$ latexmk -synctex=1 -interaction=nonstopmode -pdf thesis.tex
Latexmk: This is Latexmk, John Collins, 7 August 2018, version: 4.59.
Rule 'pdflatex': Rules & subrules not known to be previously run:
   pdflatex
Rule 'pdflatex': The following rules & subrules became out-of-date:
      'pdflatex'
------------
Run number 1 of rule 'pdflatex'
------------
------------
Running 'pdflatex  -synctex=1 -interaction=nonstopmode -recorder  "thesis.tex"'
------------
Latexmk: applying rule 'pdflatex'...
This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./thesis.tex
LaTeX2e <2018-04-01> patch level 5
(/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrbook.cls
Document Class: scrbook 2018/03/30 v3.25 KOMA-Script document class (book)
(/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrkbase.sty
(/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrbase.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrlfile.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/koma-script/tocbasic.sty)
(/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrsize12pt.clo)
(/usr/share/texlive/texmf-dist/tex/latex/koma-script/typearea.sty))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty)
(/usr/share/texlive/texmf-dist/tex/latex/booktabs/booktabs.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/multicol.sty)
(/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty)
(/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrlayer-scrpage.sty
(/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrlayer.sty))
(/usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.sty
(/usr/share/texlive/texmf-dist/tex/generic/oberdiek/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/oberdiek/infwarerr.sty)
(/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifluatex.sty)
(/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifpdf.sty))
(/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty)
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty
(/usr/share/texlive/texmf-dist/tex/generic/oberdiek/kvsetkeys.sty
(/usr/share/texlive/texmf-dist/tex/generic/oberdiek/etexcmds.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.sty
(/usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.def))
(/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/generic/xstring/xstring.sty
(/usr/share/texlive/texmf-dist/tex/generic/xstring/xstring.tex))
(/usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-dm.def)
(/usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-compat.def)
(/usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.def)
(/usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/alphabetic.bbx
(/usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/standard.bbx))
(/usr/share/texlive/texmf-dist/tex/latex/biblatex/cbx/alphabetic.cbx)
(/usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/csquotes/csquotes.sty
(/usr/share/texlive/texmf-dist/tex/latex/csquotes/csquotes.def)
(/usr/share/texlive/texmf-dist/tex/latex/csquotes/csquotes.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/appendix/appendix.sty)
(/usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/english.lbx)

Package csquotes Warning: No multilingual support.
(csquotes)                Cannot enable multilingual quotes on input line 67.

(./thesis.aux)
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty
(/usr/share/texlive/texmf-dist/tex/generic/oberdiek/kvdefinekeys.sty))
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
No file thesis.bbl.
(./includes/BA-titlepage.tex

LaTeX Font Warning: Font shape `OT1/cmr/bx/sc' undefined
(Font)              using `OT1/cmr/bx/n' instead on input line 29.

! Missing } inserted.
<inserted text>
                }
l.42     \end{onehalfspace}

[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map} <./images/uni-logo.png>])

No file thesis.toc.
[2] (./includes/abstract.tex) [3] (./includes/acknowledgements.tex) [4]
No file thesis.lof.
[5]
No file thesis.lot.
[6] (./chapters/introduction.tex
chapter 1.
(/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd)

LaTeX Warning: Citation 'latex_symbols_2017' on page 1 undefined on input line
25.


LaTeX Warning: Reference `chap:introduction' on page 1 undefined on input line
29.


LaTeX Warning: Reference `sec:citation' on page 1 undefined on input line 29.

[1]

LaTeX Warning: Reference `fig:uniLogo' on page 2 undefined on input line 40.


LaTeX Warning: Reference `tab:result' on page 2 undefined on input line 56.

) [2] (./chapters/background.tex
chapter 2.
) [3] (./chapters/methods.tex
chapter 3.
) [4] (./chapters/results.tex
chapter 4.
) [5] (./chapters/discussion.tex
chapter 5.
) [6] (./chapters/conclusion.tex
chapter 6.
) [7] (./appendix.tex
chapter A.
[8]
chapter B.
[9]
chapter C.
) [10]

LaTeX Warning: Empty bibliography on input line 122.

(./includes/eidesstattlicheErklaerung.tex
chapter without number

Overfull \hbox (19.1142pt too wide) in paragraph at lines 6--7
\OT1/cmr/m/n/12 an-derer als der angegebe-nen Quellen und Hil-f-s-mit-tel ange-
fer-tigt habe und alle Ausf^^?uhrungen,

Overfull \hbox (36.57793pt too wide) in paragraph at lines 6--7
\OT1/cmr/m/n/12 dass ich die Bach-e-lo-rar-beit in gle-icher oder ^^?ahnlicher
Form noch keiner an-deren Pr^^?ufungsbeh^^?orde
) [11] (./thesis.aux (./includes/BA-titlepage.aux) (./includes/abstract.aux)
(./includes/acknowledgements.aux) (./chapters/introduction.aux)
(./chapters/background.aux) (./chapters/methods.aux) (./chapters/results.aux)
(./chapters/discussion.aux) (./chapters/conclusion.aux)
(./includes/eidesstattlicheErklaerung.aux))

LaTeX Font Warning: Some font shapes were not available, defaults substituted.


LaTeX Warning: There were undefined references.


LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.


Package biblatex Warning: Please (re)run Biber on the file:
(biblatex)                thesis
(biblatex)                and rerun LaTeX afterwards.

 )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fo
nts/type1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmr12.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfo
nts/cm/cmr8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/c
msl12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmssbx1
0.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt12.pfb>
Output written on thesis.pdf (17 pages, 124866 bytes).
SyncTeX written on thesis.synctex.gz.
Transcript written on thesis.log.
Latexmk: Non-existent bbl file 'thesis.bbl'
 No file thesis.bbl.
Latexmk: Missing input file: 'thesis.toc' from line
  'No file thesis.toc.'
Latexmk: Missing input file: 'thesis.lof' from line
  'No file thesis.lof.'
Latexmk: Missing input file: 'thesis.lot' from line
  'No file thesis.lot.'
Latexmk: References changed.
Latexmk: Log file says output to 'thesis.pdf'
Latexmk: List of undefined refs and citations:
  Citation 'latex_symbols_2017' on page 1 undefined on input line 25
  Reference `chap:introduction' on page 1 undefined on input line 29
  Reference `fig:uniLogo' on page 2 undefined on input line 40
  Reference `sec:citation' on page 1 undefined on input line 29
  Reference `tab:result' on page 2 undefined on input line 56
Latexmk: Summary of warnings from last run of (pdf)latex:
  Latex failed to resolve 4 reference(s)
  Latex failed to resolve 1 citation(s)
Collected error summary (may duplicate other messages):
  pdflatex: Command for 'pdflatex' gave return code 1
      Refer to 'thesis.log' for details
Latexmk: Use the -f option to force complete processing,
 unless error was exceeding maximum runs, or warnings treated as errors.
=== TeX engine is 'pdfTeX'
Latexmk: Errors, so I did not complete making targets
ERROR: Job failed: exit code 1