API tools faq
paste
Advertisement
Light1992

Bug SequenceServer

Light1992
May 22nd, 2019
112
0
Never
Add comment
Not a member of Pastebin yet? Sign Up, it unlocks many cool features!
text 5.15 KB | None | 0 0
raw download clone embed print report
  1. URI::InvalidURIError - bad URI(is not URI?): <http://10.150.2.3/jbrowse1>?data=Oe6_s08042&loc=:17884..18884&addFeatures=%5B%7B%22seq_id%22%3A%22%22%2C%22start%22%3A18384%2C%22end%22%3A18760%2C%22type%22%3A%22match%22%2C%22subfeatures%22%3A%5B%7B%22start%22%3A18058%2C%22end%22%3A18384%2C%22type%22%3A%22match_part%22%7D%2C%7B%22start%22%3A18760%2C%22end%22%3A19066%2C%22type%22%3A%22match_part%22%7D%5D%7D%5D&addTracks=%5B%7B%22label%22%3A%22BLAST%22%2C%22key%22%3A%22BLAST%20hits%22%2C%22type%22%3A%22JBrowse%2FView%2FTrack%2FCanvasFeatures%22%2C%22store%22%3A%22url%22%2C%22glyph%22%3A%22JBrowse%2FView%2FFeatureGlyph%2FSegments%22%7D%5D&tracks=BLAST&highlight=Oe6_s08042:18384..18058:
  2. /usr/share/ruby/uri/common.rb:176:in `split'
  3. /usr/share/ruby/uri/common.rb:211:in `parse'
  4. /usr/share/ruby/uri/common.rb:747:in `parse'
  5. /usr/local/share/gems/gems/sequenceserver-1.0.11/lib/sequenceserver/routes.rb:75:in `absolute?'
  6. /usr/local/share/gems/gems/sequenceserver-1.0.11/lib/sequenceserver/routes.rb:64:in `a'
  7. /usr/local/share/gems/gems/sequenceserver-1.0.11/views/result.erb:101:in `block (4 levels) in singleton class'
  8. /usr/local/share/gems/gems/sequenceserver-1.0.11/views/result.erb:100:in `each'
  9. /usr/local/share/gems/gems/sequenceserver-1.0.11/views/result.erb:100:in `block (3 levels) in singleton class'
  10. /usr/local/share/gems/gems/sequenceserver-1.0.11/views/result.erb:59:in `each'
  11. /usr/local/share/gems/gems/sequenceserver-1.0.11/views/result.erb:59:in `block (2 levels) in singleton class'
  12. /usr/local/share/gems/gems/sequenceserver-1.0.11/views/result.erb:5:in `each'
  13. /usr/local/share/gems/gems/sequenceserver-1.0.11/views/result.erb:5:in `each_with_index'
  14. /usr/local/share/gems/gems/sequenceserver-1.0.11/views/result.erb:5:in `block in singleton class'
  15. /usr/local/share/gems/gems/sequenceserver-1.0.11/views/result.erb:-6:in `instance_eval'
  16. /usr/local/share/gems/gems/sequenceserver-1.0.11/views/result.erb:-6:in `singleton class'
  17. /usr/local/share/gems/gems/sequenceserver-1.0.11/views/result.erb:-9:in `__tilt_17656760'
  18. /usr/local/share/gems/gems/tilt-2.0.9/lib/tilt/template.rb:170:in `call'
  19. /usr/local/share/gems/gems/tilt-2.0.9/lib/tilt/template.rb:170:in `evaluate'
  20. /usr/local/share/gems/gems/tilt-2.0.9/lib/tilt/template.rb:109:in `render'
  21. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:823:in `render'
  22. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:667:in `erb'
  23. /usr/local/share/gems/gems/sequenceserver-1.0.11/lib/sequenceserver/routes.rb:135:in `block in <class:Routes>'
  24. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1611:in `call'
  25. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1611:in `block in compile!'
  26. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:975:in `[]'
  27. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:975:in `block (3 levels) in route!'
  28. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:994:in `route_eval'
  29. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:975:in `block (2 levels) in route!'
  30. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1015:in `block in process_route'
  31. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1013:in `catch'
  32. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1013:in `process_route'
  33. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:973:in `block in route!'
  34. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:972:in `each'
  35. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:972:in `route!'
  36. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1085:in `block in dispatch!'
  37. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1067:in `block in invoke'
  38. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1067:in `catch'
  39. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1067:in `invoke'
  40. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1082:in `dispatch!'
  41. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:907:in `block in call!'
  42. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1067:in `block in invoke'
  43. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1067:in `catch'
  44. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1067:in `invoke'
  45. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:907:in `call!'
  46. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:895:in `call'
  47. /usr/local/share/gems/gems/rack-1.6.11/lib/rack/head.rb:13:in `call'
  48. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:182:in `call'
  49. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:2013:in `call'
  50. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1487:in `block in call'
  51. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1787:in `synchronize'
  52. /usr/local/share/gems/gems/sinatra-1.4.8/lib/sinatra/base.rb:1487:in `call'
  53. /usr/local/share/gems/gems/sequenceserver-1.0.11/lib/sequenceserver.rb:92:in `call'
  54. /usr/local/share/gems/gems/rack-1.6.11/lib/rack/handler/webrick.rb:88:in `service'
  55. /usr/share/ruby/webrick/httpserver.rb:138:in `service'
  56. /usr/share/ruby/webrick/httpserver.rb:94:in `run'
  57. /usr/share/ruby/webrick/server.rb:295:in `block in start_thread'
Advertisement
Add Comment
Please, Sign In to add comment
Advertisement
Public Pastes
Advertisement
We use cookies for various purposes including analytics. By continuing to use Pastebin, you agree to our use of cookies as described in the Cookies Policy.  OK, I Understand
Not a member of Pastebin yet?
Sign Up, it unlocks many cool features!