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- BEAST v2.2.0, 2002-2015
- Bayesian Evolutionary Analysis Sampling Trees
- Designed and developed by
- Remco Bouckaert, Alexei J. Drummond, Andrew Rambaut & Marc A. Suchard
- Department of Computer Science
- University of Auckland
- remco@cs.auckland.ac.nz
- alexei@cs.auckland.ac.nz
- Institute of Evolutionary Biology
- University of Edinburgh
- a.rambaut@ed.ac.uk
- David Geffen School of Medicine
- University of California, Los Angeles
- msuchard@ucla.edu
- Downloads, Help & Resources:
- http://beast2.org/
- Source code distributed under the GNU Lesser General Public License:
- http://github.com/CompEvol/beast2
- BEAST developers:
- Alex Alekseyenko, Trevor Bedford, Erik Bloomquist, Joseph Heled,
- Sebastian Hoehna, Denise Kuehnert, Philippe Lemey, Wai Lok Sibon Li,
- Gerton Lunter, Sidney Markowitz, Vladimir Minin, Michael Defoin Platel,
- Oliver Pybus, Chieh-Hsi Wu, Walter Xie
- Thanks to:
- Roald Forsberg, Beth Shapiro and Korbinian Strimmer
- File: 20150831.xml seed: 1441036415656 threads: 1
- Random number seed: 1441036415656
- Failed to load BEAGLE library: no hmsbeagle64 in java.library.path
- Failed to load BEAGLE library: no hmsbeagle64 in java.library.path
- Failed to load BEAGLE library: no hmsbeagle64 in java.library.path
- Failed to load BEAGLE library: no hmsbeagle64 in java.library.path
- Failed to load BEAGLE library: no hmsbeagle64 in java.library.path
- Failed to load BEAGLE library: no hmsbeagle64 in java.library.path
- Failed to load BEAGLE library: no hmsbeagle64 in java.library.path
- Failed to load BEAGLE library: no hmsbeagle64 in java.library.path
- Failed to load BEAGLE library: no hmsbeagle64 in java.library.path
- java.lang.NumberFormatException: empty String
- at sun.misc.FloatingDecimal.readJavaFormatString(Unknown Source)
- at sun.misc.FloatingDecimal.parseDouble(Unknown Source)
- at java.lang.Double.parseDouble(Unknown Source)
- at sphericalGeo.TreeTraitMap.initAndValidate(Unknown Source)
- at beast.util.XMLParser.initPlugins(Unknown Source)
- at beast.util.XMLParser.parse(Unknown Source)
- at beast.util.XMLParser.parseFile(Unknown Source)
- at beast.app.BeastMCMC.parseArgs(Unknown Source)
- at beast.app.beastapp.BeastMain.main(Unknown Source)
- at beast.app.beastapp.BeastLauncher.main(Unknown Source)
- Error 110 parsing the xml input file
- validate and intialize error: empty String
- Error detected about here:
- <beast>
- <run id='mcmc' spec='MCMC'>
- <distribution id='posterior' spec='util.CompoundDistribution'>
- <distribution id='likelihood' spec='util.CompoundDistribution'>
- <distribution id='slocationtreeLikelihood.newTrait' spec='sphericalGeo.ApproxMultivariateTraitLikelihood'>
- <data id='newTrait' spec='sphericalGeo.AlignmentFromTraitMap'>
- <traitMap id='traitmap.s:newTrait' spec='sphericalGeo.TreeTraitMap'>
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