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misnomer001

tkm_ia with irula

misnomer001
Apr 28th, 2021
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  1. qpAdm: parameter file: par
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: fstatsa.txt
  5. popleft: left1
  6. popright: right1
  7. details: YES
  8. ## qpAdm version: 1201
  9. seed: 1632221208
  10.  
  11. left pops:
  12. Turkmenistan_IA.SG
  13. Uzbekistan_Bustan_BA
  14. Russia_Srubnaya
  15. Irula.DG
  16.  
  17. right pops:
  18. Mbuti.DG
  19. Russia_HG_Karelia
  20. Turkey_N
  21. Russia_HG_Tyumen
  22. Mongolia_North_N
  23. Serbia_IronGates_Mesolithic
  24. Iran_GanjDareh_N
  25. Georgia_Kotias.SG
  26. ONG.SG
  27.  
  28. codimension 1
  29. f4info:
  30. f4rank: 2 dof: 6 chisq: 11.013 tail: 0.087989227 dofdiff: 8 chisqdiff: -11.013 taildiff: 1
  31. B:
  32. scale 1.000 1.000
  33. Russia_HG_Karelia 1.260 0.951
  34. Turkey_N 1.251 -0.220
  35. Russia_HG_Tyumen 0.955 0.378
  36. Mongolia_North_N -0.336 0.604
  37. Serbia_IronGates_Mesolithic 1.428 1.176
  38. Iran_GanjDareh_N 0.708 -1.952
  39. Georgia_Kotias.SG 0.936 -0.874
  40. ONG.SG -0.639 0.763
  41. A:
  42. scale 263.318 691.574
  43. Uzbekistan_Bustan_BA -0.261 -1.252
  44. Russia_Srubnaya 0.522 1.070
  45. Irula.DG -1.631 0.537
  46.  
  47.  
  48. full rank
  49. f4info:
  50. f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 6 chisqdiff: 11.013 taildiff: 0.087989227
  51. B:
  52. scale 507.644 367.501 162.026
  53. Russia_HG_Karelia -1.367 1.559 -1.114
  54. Turkey_N -0.290 0.886 -1.242
  55. Russia_HG_Tyumen -0.804 0.926 -0.917
  56. Mongolia_North_N -0.044 0.331 0.516
  57. Serbia_IronGates_Mesolithic -1.516 1.912 -1.208
  58. Iran_GanjDareh_N 1.751 -0.365 -0.862
  59. Georgia_Kotias.SG 0.136 0.063 -1.113
  60. ONG.SG -0.124 0.157 0.816
  61. A:
  62. scale 1.732 1.732 1.732
  63. Uzbekistan_Bustan_BA 1.732 0.000 0.000
  64. Russia_Srubnaya 0.000 1.732 0.000
  65. Irula.DG 0.000 0.000 1.732
  66.  
  67.  
  68. best coefficients: 0.442 0.476 0.082
  69. totmean: 0.442 0.476 0.082
  70. boot mean: 0.442 0.476 0.082
  71. std. errors: 0.033 0.028 0.021
  72.  
  73. error covariance (* 1,000,000)
  74. 1115 -723 -392
  75. -723 767 -44
  76. -392 -44 437
  77.  
  78.  
  79. summ: Turkmenistan_IA.SG 3 0.087989 0.442 0.476 0.082 1115 -723 -392 767 -44 ...
  80. 437
  81.  
  82. fixed pat wt dof chisq tail prob
  83. 000 0 6 11.013 0.0879892 0.442 0.476 0.082
  84. 001 1 7 27.061 0.000324999 0.507 0.493 0.000
  85. 010 1 7 252.707 0 0.908 0.000 0.092
  86. 100 1 7 178.789 0 0.000 0.768 0.232
  87. 011 2 8 265.212 0 1.000 0.000 0.000
  88. 101 2 8 330.764 0 0.000 1.000 0.000
  89. 110 2 8 1172.275 0 0.000 0.000 1.000
  90. best pat: 000 0.0879892 - -
  91. best pat: 001 0.000324999 chi(nested): 16.048 p-value for nested model: 6.17521e-05
  92. best pat: 011 1.0218e-52 chi(nested): 238.151 p-value for nested model: 9.95021e-54
  93.  
  94. coeffs: 0.442 0.476 0.082
  95.  
  96. ## dscore:: f_4(Base, Fit, Rbase, right2)
  97. ## genstat:: f_4(Base, Fit, right1, right2)
  98.  
  99. details: Uzbekistan_Bustan_BA Russia_HG_Karelia -0.002692 -5.219564
  100. details: Russia_Srubnaya Russia_HG_Karelia 0.004242 8.826015
  101. details: Irula.DG Russia_HG_Karelia -0.006877 -12.044540
  102. dscore: Russia_HG_Karelia f4: 0.000269 Z: 0.572941
  103.  
  104. details: Uzbekistan_Bustan_BA Turkey_N -0.000572 -1.630961
  105. details: Russia_Srubnaya Turkey_N 0.002410 7.233618
  106. details: Irula.DG Turkey_N -0.007667 -19.048815
  107. dscore: Turkey_N f4: 0.000269 Z: 0.831190
  108.  
  109. details: Uzbekistan_Bustan_BA Russia_HG_Tyumen -0.001583 -2.866362
  110. details: Russia_Srubnaya Russia_HG_Tyumen 0.002521 4.824936
  111. details: Irula.DG Russia_HG_Tyumen -0.005661 -9.232073
  112. dscore: Russia_HG_Tyumen f4: 0.000039 Z: 0.076520
  113.  
  114. details: Uzbekistan_Bustan_BA Mongolia_North_N -0.000087 -0.218183
  115. details: Russia_Srubnaya Mongolia_North_N 0.000900 2.515576
  116. details: Irula.DG Mongolia_North_N 0.003187 6.810202
  117. dscore: Mongolia_North_N f4: 0.000651 Z: 1.824282
  118.  
  119. details: Uzbekistan_Bustan_BA Serbia_IronGates_Mesolithic -0.002987 -7.764337
  120. details: Russia_Srubnaya Serbia_IronGates_Mesolithic 0.005203 14.266847
  121. details: Irula.DG Serbia_IronGates_Mesolithic -0.007458 -17.064977
  122. dscore: Serbia_IronGates_Mesolithic f4: 0.000549 Z: 1.552507
  123.  
  124. details: Uzbekistan_Bustan_BA Iran_GanjDareh_N 0.003450 9.253621
  125. details: Russia_Srubnaya Iran_GanjDareh_N -0.000992 -2.900139
  126. details: Irula.DG Iran_GanjDareh_N -0.005319 -13.054972
  127. dscore: Iran_GanjDareh_N f4: 0.000618 Z: 1.844271
  128.  
  129. details: Uzbekistan_Bustan_BA Georgia_Kotias.SG 0.000268 0.514814
  130. details: Russia_Srubnaya Georgia_Kotias.SG 0.000171 0.365405
  131. details: Irula.DG Georgia_Kotias.SG -0.006868 -12.375277
  132. dscore: Georgia_Kotias.SG f4: -0.000361 Z: -0.782656
  133.  
  134. details: Uzbekistan_Bustan_BA ONG.SG -0.000244 -0.623798
  135. details: Russia_Srubnaya ONG.SG 0.000426 1.142621
  136. details: Irula.DG ONG.SG 0.005037 11.291338
  137. dscore: ONG.SG f4: 0.000507 Z: 1.411354
  138.  
  139. gendstat: Mbuti.DG Russia_HG_Karelia 0.573
  140. gendstat: Mbuti.DG Turkey_N 0.831
  141. gendstat: Mbuti.DG Russia_HG_Tyumen 0.077
  142. gendstat: Mbuti.DG Mongolia_North_N 1.824
  143. gendstat: Mbuti.DG Serbia_IronGates_Mesolithic 1.553
  144. gendstat: Mbuti.DG Iran_GanjDareh_N 1.844
  145. gendstat: Mbuti.DG Georgia_Kotias.SG -0.783
  146. gendstat: Mbuti.DG ONG.SG 1.411
  147. gendstat: Russia_HG_Karelia Turkey_N -0.001
  148. gendstat: Russia_HG_Karelia Russia_HG_Tyumen -0.436
  149. gendstat: Russia_HG_Karelia Mongolia_North_N 0.817
  150. gendstat: Russia_HG_Karelia Serbia_IronGates_Mesolithic 0.675
  151. gendstat: Russia_HG_Karelia Iran_GanjDareh_N 0.706
  152. gendstat: Russia_HG_Karelia Georgia_Kotias.SG -1.145
  153. gendstat: Russia_HG_Karelia ONG.SG 0.476
  154. gendstat: Turkey_N Russia_HG_Tyumen -0.460
  155. gendstat: Turkey_N Mongolia_North_N 1.078
  156. gendstat: Turkey_N Serbia_IronGates_Mesolithic 1.030
  157. gendstat: Turkey_N Iran_GanjDareh_N 1.051
  158. gendstat: Turkey_N Georgia_Kotias.SG -1.464
  159. gendstat: Turkey_N ONG.SG 0.669
  160. gendstat: Russia_HG_Tyumen Mongolia_North_N 1.299
  161. gendstat: Russia_HG_Tyumen Serbia_IronGates_Mesolithic 1.071
  162. gendstat: Russia_HG_Tyumen Iran_GanjDareh_N 1.144
  163. gendstat: Russia_HG_Tyumen Georgia_Kotias.SG -0.672
  164. gendstat: Russia_HG_Tyumen ONG.SG 0.924
  165. gendstat: Mongolia_North_N Serbia_IronGates_Mesolithic -0.286
  166. gendstat: Mongolia_North_N Iran_GanjDareh_N -0.089
  167. gendstat: Mongolia_North_N Georgia_Kotias.SG -2.086
  168. gendstat: Mongolia_North_N ONG.SG -0.457
  169. gendstat: Serbia_IronGates_Mesolithic Iran_GanjDareh_N 0.185
  170. gendstat: Serbia_IronGates_Mesolithic Georgia_Kotias.SG -1.978
  171. gendstat: Serbia_IronGates_Mesolithic ONG.SG -0.117
  172. gendstat: Iran_GanjDareh_N Georgia_Kotias.SG -2.236
  173. gendstat: Iran_GanjDareh_N ONG.SG -0.302
  174. gendstat: Georgia_Kotias.SG ONG.SG 1.785
  175.  
  176. ##end of qpAdm: 5.243 seconds cpu 0.725 Mbytes in use
  177.  
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