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Feb 17th, 2020
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  1. 3 from Bio import SeqIO
  2. 4
  3. 5 import sys
  4. 6
  5. 7 inputfile_name = sys.argv[1]
  6. 8 outfile_name = sys.argv[1].split('.')[0] + '.fasta'
  7. 10
  8. 11 records = SeqIO.parse(inputfile_name, "genbank")
  9. 12 count = SeqIO.write(records, outfile_name, "fasta")
  10. 13 print("Converted %i records" % count)
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