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  1. [verbose]: Creating arXiv submission AutoTeX object
  2. [verbose]: *** Using TeX Live 2016 ***
  3. [verbose]: Calling arXiv submission AutoTeX process
  4. [verbose]: TeX/AutoTeX.pm: admin_timeout = minion
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  12. [verbose]: <benign_ex_cluster_overlay.png> is of type 'Image (gif/jpg etc)'.
  13. [verbose]: <tumour_ex_ihc.png> is of type 'Image (gif/jpg etc)'.
  14. [verbose]: <benign_ex_ihc.png> is of type 'Image (gif/jpg etc)'.
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  19. [verbose]: ~~~~~~~~~~~ Processing file 'main.tex'
  20. [verbose]: TEXMFCNF is unset.
  21. [verbose]: ~~~~~~~~~~~ Running hpdflatex for the first time ~~~~~~~~
  22. [verbose]: Running: "(export HOME=/tmp PATH=/texlive/2016/bin/arch:/bin; cd /submissions/2680053/ && pdflatex 'main.tex' < /dev/null)" 2>&1
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  24. restricted \write18 enabled.
  25. entering extended mode
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  27. LaTeX2e <2016/03/31> patch level 3
  28. Babel <3.9r> and hyphenation patterns for 83 language(s) loaded.
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  42. (/texlive/2016/texmf-dist/tex/latex/base/size11.clo))
  43. (/texlive/2016/texmf-dist/tex/latex/amsmath/amsmath.sty
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  51. (/texlive/2016/texmf-local/tex/latex/natbib/natbib.sty
  52.  
  53. This is natbib version 8.31
  54. *************************************************************
  55. !!WARNING!! !!WARNING!! !!WARNING!! !!WARNING!!
  56.  
  57. This version (v8.31) of natbib is stricter in its formatting
  58. requirements for bibitem entries than the previous version
  59. used at arXiv (v7.1).
  60.  
  61. If your submission encounters a problem see
  62.  
  63. http://arXiv.org/help/faq/texlive
  64.  
  65. and the natbib documentation at
  66.  
  67. http://www.ctan.org/tex-archive/macros/latex/contrib/natbib/
  68.  
  69. for explanation and adjust your submission accordingly.
  70. The arXiv team.
  71. *************************************************************
  72.  
  73. ) (/texlive/2016/texmf-dist/tex/latex/graphics/graphicx.sty
  74. (/texlive/2016/texmf-dist/tex/latex/graphics/graphics.sty
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  88. ********************************************************
  89. Package `algorithm2e' Release 5.1 -- october 19 2015 --
  90. - algorithm2e-announce@lirmm.fr mailing list for announcement about releases
  91. - algorithm2e-discussion@lirmm.fr mailing list for discussion about package
  92. subscribe by emailing sympa@lirmm.fr with 'subscribe <list> <firstname name>'
  93. - Author: Christophe Fiorio (christophe.fiorio@umontpellier.fr)
  94. ********************************************************
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  117. (/texlive/2016/texmf-dist/tex/latex/booktabs/booktabs.sty)
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  119. ! LaTeX Error: Option clash for package hyperref.
  120.  
  121. See the LaTeX manual or LaTeX Companion for explanation.
  122. Type H <return> for immediate help.
  123. ...
  124.  
  125. l.66 \begin
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  128. ! Emergency stop.
  129. ...
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  131. l.66 \begin
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  133. ! ==> Fatal error occurred, no output PDF file produced!
  134. Transcript written on main.log.
  135.  
  136. [verbose]: pdflatex 'main.tex' failed.
  137. [verbose]: TEXMFCNF is unset.
  138. [verbose]: ~~~~~~~~~~~ Running pdflatex for the first time ~~~~~~~~
  139. [verbose]: Running: "(export HOME=/tmp PATH=/texlive/2016/bin/arch:/bin; cd /submissions/2680053/ && pdflatex 'main.tex' < /dev/null)" 2>&1
  140. [verbose]: This is pdfTeX, Version 3.14159265-2.6-1.40.17 (TeX Live 2016) (preloaded format=pdflatex)
  141. restricted \write18 enabled.
  142. entering extended mode
  143. (./main.tex
  144. LaTeX2e <2016/03/31> patch level 3
  145. Babel <3.9r> and hyphenation patterns for 83 language(s) loaded.
  146. (./midl.cls
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  162. (/texlive/2016/texmf-dist/tex/latex/amsmath/amstext.sty
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  168. (/texlive/2016/texmf-local/tex/latex/natbib/natbib.sty
  169.  
  170. This is natbib version 8.31
  171. *************************************************************
  172. !!WARNING!! !!WARNING!! !!WARNING!! !!WARNING!!
  173.  
  174. This version (v8.31) of natbib is stricter in its formatting
  175. requirements for bibitem entries than the previous version
  176. used at arXiv (v7.1).
  177.  
  178. If your submission encounters a problem see
  179.  
  180. http://arXiv.org/help/faq/texlive
  181.  
  182. and the natbib documentation at
  183.  
  184. http://www.ctan.org/tex-archive/macros/latex/contrib/natbib/
  185.  
  186. for explanation and adjust your submission accordingly.
  187. The arXiv team.
  188. *************************************************************
  189.  
  190. ) (/texlive/2016/texmf-dist/tex/latex/graphics/graphicx.sty
  191. (/texlive/2016/texmf-dist/tex/latex/graphics/graphics.sty
  192. (/texlive/2016/texmf-dist/tex/latex/graphics/trig.sty)
  193. (/texlive/2016/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
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  196. (/texlive/2016/texmf-dist/tex/generic/oberdiek/ltxcmds.sty))))
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  203. (/texlive/2016/texmf-dist/tex/latex/tools/xspace.sty)
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  205. ********************************************************
  206. Package `algorithm2e' Release 5.1 -- october 19 2015 --
  207. - algorithm2e-announce@lirmm.fr mailing list for announcement about releases
  208. - algorithm2e-discussion@lirmm.fr mailing list for discussion about package
  209. subscribe by emailing sympa@lirmm.fr with 'subscribe <list> <firstname name>'
  210. - Author: Christophe Fiorio (christophe.fiorio@umontpellier.fr)
  211. ********************************************************
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  221. Package hyperref Message: Driver (autodetected): hpdftex.
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  234. (/texlive/2016/texmf-dist/tex/latex/booktabs/booktabs.sty)
  235.  
  236. LaTeX Warning: Unused global option(s):
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  238.  
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  248.  
  249. Package natbib Warning: Citation `litjens2017survey' on page 1 undefined on inp
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  251.  
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  253. <use experiment_setup.png>
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  255. Package natbib Warning: Citation `arevalo2015unsupervised' on page 1 undefined
  256. on input line 87.
  257.  
  258.  
  259. Package natbib Warning: Citation `hou2019sparse' on page 1 undefined on input l
  260. ine 87.
  261.  
  262.  
  263. Package natbib Warning: Citation `kallenberg2016unsupervised' on page 1 undefin
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  265.  
  266.  
  267. LaTeX Warning: Reference `fig:experiment_setup' on page 1 undefined on input li
  268. ne 87.
  269.  
  270.  
  271. Package natbib Warning: Citation `bulten2019epithelium' on page 1 undefined on
  272. input line 90.
  273.  
  274. (/texlive/2016/texmf-dist/tex/latex/amsfonts/umsa.fd)
  275. (/texlive/2016/texmf-dist/tex/latex/amsfonts/umsb.fd)
  276.  
  277. LaTeX Warning: Reference `jmlrstart' on page 1 undefined on input line 91.
  278.  
  279.  
  280. LaTeX Warning: Reference `jmlrend' on page 1 undefined on input line 91.
  281.  
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  299. <tumour_ex_cluster_overlay.png, id=32, 346.896pt x 346.896pt>
  300. <use tumour_ex_cluster_overlay.png> [2 <./experiment_setup.png> <./benign_ex_he
  301. .png> <./tumour_ex_he.png> <./benign_ex_ihc.png> <./tumour_ex_ihc.png> <./benig
  302. n_ex_supervised_overlay.png> <./tumour_ex_supervised_overlay.png> <./benign_ex_
  303. semi_overlay.png> <./tumour_ex_semi_overlay.png> <./benign_ex_cluster_overlay.p
  304. ng> <./tumour_ex_cluster_overlay.png>]
  305.  
  306. LaTeX Warning: Reference `tab:results' on page 3 undefined on input line 165.
  307.  
  308. [3] [4] (./main.bbl)
  309.  
  310. Package natbib Warning: There were undefined citations.
  311.  
  312. [5] (./main.aux
  313.  
  314. Package natbib Warning: Citation(s) may have changed.
  315. (natbib) Rerun to get citations correct.
  316.  
  317. )
  318.  
  319. Package rerunfilecheck Warning: File `main.out' has changed.
  320. (rerunfilecheck) Rerun to get outlines right
  321. (rerunfilecheck) or use package `bookmark'.
  322.  
  323.  
  324. LaTeX Warning: There were undefined references.
  325.  
  326.  
  327. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.
  328.  
  329. )
  330. (\end occurred inside a group at level 1)
  331.  
  332. ### simple group (level 1) entered at line 1061 ({)
  333. ### bottom level
  334. (see the transcript file for additional information){/texlive/2016/texmf-dist/f
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  341. fonts/type1/public/amsfonts/cm/cmmi8.pfb></texlive/2016/texmf-dist/fonts/type1/
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  349. frm0800.pfb>
  350. Output written on main.pdf (5 pages, 4345141 bytes).
  351. Transcript written on main.log.
  352.  
  353. [verbose]: ~~~~~~~~~~~ Running pdflatex for the second time ~~~~~~~~
  354. [verbose]: Running: "(export HOME=/tmp PATH=/texlive/2016/bin/arch:/bin; cd /submissions/2680053/ && pdflatex 'main.tex' < /dev/null)" 2>&1
  355. [verbose]: This is pdfTeX, Version 3.14159265-2.6-1.40.17 (TeX Live 2016) (preloaded format=pdflatex)
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  363. (/texlive/2016/texmf-dist/tex/latex/jmlr/jmlr.cls
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  370. (/texlive/2016/texmf-dist/tex/latex/tools/calc.sty)
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  376. For additional information on amsmath, use the `?' option.
  377. (/texlive/2016/texmf-dist/tex/latex/amsmath/amstext.sty
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  381. (/texlive/2016/texmf-dist/tex/latex/amsfonts/amssymb.sty
  382. (/texlive/2016/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
  383. (/texlive/2016/texmf-local/tex/latex/natbib/natbib.sty
  384.  
  385. This is natbib version 8.31
  386. *************************************************************
  387. !!WARNING!! !!WARNING!! !!WARNING!! !!WARNING!!
  388.  
  389. This version (v8.31) of natbib is stricter in its formatting
  390. requirements for bibitem entries than the previous version
  391. used at arXiv (v7.1).
  392.  
  393. If your submission encounters a problem see
  394.  
  395. http://arXiv.org/help/faq/texlive
  396.  
  397. and the natbib documentation at
  398.  
  399. http://www.ctan.org/tex-archive/macros/latex/contrib/natbib/
  400.  
  401. for explanation and adjust your submission accordingly.
  402. The arXiv team.
  403. *************************************************************
  404.  
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  418. (/texlive/2016/texmf-dist/tex/latex/tools/xspace.sty)
  419. (/texlive/2016/texmf-dist/tex/latex/relsize/relsize.sty)
  420. ********************************************************
  421. Package `algorithm2e' Release 5.1 -- october 19 2015 --
  422. - algorithm2e-announce@lirmm.fr mailing list for announcement about releases
  423. - algorithm2e-discussion@lirmm.fr mailing list for discussion about package
  424. subscribe by emailing sympa@lirmm.fr with 'subscribe <list> <firstname name>'
  425. - Author: Christophe Fiorio (christophe.fiorio@umontpellier.fr)
  426. ********************************************************
  427. ) (/texlive/2016/texmf-dist/tex/latex/hyperref/hyperref.sty
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  435.  
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  449. (/texlive/2016/texmf-dist/tex/latex/booktabs/booktabs.sty)
  450.  
  451. LaTeX Warning: Unused global option(s):
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  453.  
  454. (./main.aux) (/texlive/2016/texmf-dist/tex/latex/base/ts1cmr.fd)
  455. (/texlive/2016/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
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  457. ) (/texlive/2016/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty
  458. (/texlive/2016/texmf-dist/tex/latex/oberdiek/grfext.sty)
  459. (/texlive/2016/texmf-config/tex/latex/latexconfig/epstopdf-sys.cfg))
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  472. <use benign_ex_supervised_overlay.png>
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  474. <use tumour_ex_supervised_overlay.png>
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  476. <use benign_ex_semi_overlay.png>
  477. <tumour_ex_semi_overlay.png, id=57, 346.896pt x 346.896pt>
  478. <use tumour_ex_semi_overlay.png>
  479. Underfull \hbox (badness 10000) in paragraph at lines 134--134
  480. []\OT1/cmr/m/n/9 Semi-
  481. <benign_ex_cluster_overlay.png, id=58, 346.896pt x 346.896pt>
  482. <use benign_ex_cluster_overlay.png>
  483. <tumour_ex_cluster_overlay.png, id=59, 346.896pt x 346.896pt>
  484. <use tumour_ex_cluster_overlay.png> [2 <./experiment_setup.png>] [3 <./benign_e
  485. x_he.png> <./tumour_ex_he.png> <./benign_ex_ihc.png> <./tumour_ex_ihc.png> <./b
  486. enign_ex_supervised_overlay.png> <./tumour_ex_supervised_overlay.png> <./benign
  487. _ex_semi_overlay.png> <./tumour_ex_semi_overlay.png> <./benign_ex_cluster_overl
  488. ay.png> <./tumour_ex_cluster_overlay.png>] [4] (./main.bbl) [5] (./main.aux)
  489.  
  490. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.
  491.  
  492. )
  493. (\end occurred inside a group at level 1)
  494.  
  495. ### simple group (level 1) entered at line 1061 ({)
  496. ### bottom level
  497. (see the transcript file for additional information){/texlive/2016/texmf-dist/f
  498. onts/enc/dvips/cm-super/cm-super-ts1.enc}</texlive/2016/texmf-dist/fonts/type1/
  499. public/amsfonts/cm/cmbx10.pfb></texlive/2016/texmf-dist/fonts/type1/public/amsf
  500. onts/cm/cmbx12.pfb></texlive/2016/texmf-dist/fonts/type1/public/amsfonts/cm/cmb
  501. x9.pfb></texlive/2016/texmf-dist/fonts/type1/public/amsfonts/cm/cmcsc10.pfb></t
  502. exlive/2016/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb></texlive/2016
  503. /texmf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb></texlive/2016/texmf-dist/
  504. fonts/type1/public/amsfonts/cm/cmr10.pfb></texlive/2016/texmf-dist/fonts/type1/
  505. public/amsfonts/cm/cmr8.pfb></texlive/2016/texmf-dist/fonts/type1/public/amsfon
  506. ts/cm/cmr9.pfb></texlive/2016/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.
  507. pfb></texlive/2016/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy9.pfb></texliv
  508. e/2016/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb></texlive/2016/texm
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  510. /type1/public/cm-super/sfbx0900.pfb></texlive/2016/texmf-dist/fonts/type1/publi
  511. c/cm-super/sfrm0800.pfb>
  512. Output written on main.pdf (5 pages, 4338941 bytes).
  513. Transcript written on main.log.
  514.  
  515. [verbose]: ~~~~~~~~~~~ Running pdflatex for the third time ~~~~~~~~
  516. [verbose]: Running: "(export HOME=/tmp PATH=/texlive/2016/bin/arch:/bin; cd /submissions/2680053/ && pdflatex 'main.tex' < /dev/null)" 2>&1
  517. [verbose]: This is pdfTeX, Version 3.14159265-2.6-1.40.17 (TeX Live 2016) (preloaded format=pdflatex)
  518. restricted \write18 enabled.
  519. entering extended mode
  520. (./main.tex
  521. LaTeX2e <2016/03/31> patch level 3
  522. Babel <3.9r> and hyphenation patterns for 83 language(s) loaded.
  523. (./midl.cls
  524. Document Class: midl 2018/10/09 v1.0 MIDL Proceedings
  525. (/texlive/2016/texmf-dist/tex/latex/jmlr/jmlr.cls
  526. Document Class: jmlr 2015/02/24 v1.21 (NLCT) Journal of Machine Learning Resear
  527. ch
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  529. (/texlive/2016/texmf-dist/tex/generic/xkeyval/xkeyval.tex
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  531. (/texlive/2016/texmf-dist/tex/generic/xkeyval/keyval.tex))))
  532. (/texlive/2016/texmf-dist/tex/latex/tools/calc.sty)
  533. (/texlive/2016/texmf-dist/tex/latex/etoolbox/etoolbox.sty)
  534. (/texlive/2016/texmf-dist/tex/latex/base/article.cls
  535. Document Class: article 2014/09/29 v1.4h Standard LaTeX document class
  536. (/texlive/2016/texmf-dist/tex/latex/base/size11.clo))
  537. (/texlive/2016/texmf-dist/tex/latex/amsmath/amsmath.sty
  538. For additional information on amsmath, use the `?' option.
  539. (/texlive/2016/texmf-dist/tex/latex/amsmath/amstext.sty
  540. (/texlive/2016/texmf-dist/tex/latex/amsmath/amsgen.sty))
  541. (/texlive/2016/texmf-dist/tex/latex/amsmath/amsbsy.sty)
  542. (/texlive/2016/texmf-dist/tex/latex/amsmath/amsopn.sty))
  543. (/texlive/2016/texmf-dist/tex/latex/amsfonts/amssymb.sty
  544. (/texlive/2016/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
  545. (/texlive/2016/texmf-local/tex/latex/natbib/natbib.sty
  546.  
  547. This is natbib version 8.31
  548. *************************************************************
  549. !!WARNING!! !!WARNING!! !!WARNING!! !!WARNING!!
  550.  
  551. This version (v8.31) of natbib is stricter in its formatting
  552. requirements for bibitem entries than the previous version
  553. used at arXiv (v7.1).
  554.  
  555. If your submission encounters a problem see
  556.  
  557. http://arXiv.org/help/faq/texlive
  558.  
  559. and the natbib documentation at
  560.  
  561. http://www.ctan.org/tex-archive/macros/latex/contrib/natbib/
  562.  
  563. for explanation and adjust your submission accordingly.
  564. The arXiv team.
  565. *************************************************************
  566.  
  567. ) (/texlive/2016/texmf-dist/tex/latex/graphics/graphicx.sty
  568. (/texlive/2016/texmf-dist/tex/latex/graphics/graphics.sty
  569. (/texlive/2016/texmf-dist/tex/latex/graphics/trig.sty)
  570. (/texlive/2016/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
  571. (/texlive/2016/texmf-dist/tex/latex/graphics-def/pdftex.def
  572. (/texlive/2016/texmf-dist/tex/generic/oberdiek/infwarerr.sty)
  573. (/texlive/2016/texmf-dist/tex/generic/oberdiek/ltxcmds.sty))))
  574. (/texlive/2016/texmf-dist/tex/latex/url/url.sty)
  575. (/texlive/2016/texmf-dist/tex/latex/xcolor/xcolor.sty
  576. (/texlive/2016/texmf-dist/tex/latex/graphics-cfg/color.cfg)
  577. (/texlive/2016/texmf-dist/tex/latex/xcolor/x11nam.def))
  578. (/texlive/2016/texmf-dist/tex/latex/algorithm2e/algorithm2e.sty
  579. (/texlive/2016/texmf-dist/tex/latex/base/ifthen.sty)
  580. (/texlive/2016/texmf-dist/tex/latex/tools/xspace.sty)
  581. (/texlive/2016/texmf-dist/tex/latex/relsize/relsize.sty)
  582. ********************************************************
  583. Package `algorithm2e' Release 5.1 -- october 19 2015 --
  584. - algorithm2e-announce@lirmm.fr mailing list for announcement about releases
  585. - algorithm2e-discussion@lirmm.fr mailing list for discussion about package
  586. subscribe by emailing sympa@lirmm.fr with 'subscribe <list> <firstname name>'
  587. - Author: Christophe Fiorio (christophe.fiorio@umontpellier.fr)
  588. ********************************************************
  589. ) (/texlive/2016/texmf-dist/tex/latex/hyperref/hyperref.sty
  590. (/texlive/2016/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty
  591. (/texlive/2016/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty))
  592. (/texlive/2016/texmf-dist/tex/generic/ifxetex/ifxetex.sty)
  593. (/texlive/2016/texmf-dist/tex/latex/oberdiek/auxhook.sty)
  594. (/texlive/2016/texmf-dist/tex/latex/oberdiek/kvoptions.sty)
  595. (/texlive/2016/texmf-dist/tex/latex/hyperref/pd1enc.def)
  596. (/texlive/2016/texmf-config/tex/latex/latexconfig/hyperref.cfg))
  597.  
  598. Package hyperref Message: Driver (autodetected): hpdftex.
  599.  
  600. (/texlive/2016/texmf-dist/tex/latex/hyperref/hpdftex.def
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  602. (/texlive/2016/texmf-dist/tex/latex/hyperref/nameref.sty
  603. (/texlive/2016/texmf-dist/tex/generic/oberdiek/gettitlestring.sty))))
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  606. (/texlive/2016/texmf-dist/tex/latex/blindtext/blindtext.sty))
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  608. (/texlive/2016/texmf-dist/tex/latex/base/textcomp.sty
  609. (/texlive/2016/texmf-dist/tex/latex/base/ts1enc.def))
  610. (/texlive/2016/texmf-dist/tex/latex/multirow/multirow.sty)
  611. (/texlive/2016/texmf-dist/tex/latex/booktabs/booktabs.sty)
  612.  
  613. LaTeX Warning: Unused global option(s):
  614. [pmlr].
  615.  
  616. (./main.aux) (/texlive/2016/texmf-dist/tex/latex/base/ts1cmr.fd)
  617. (/texlive/2016/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
  618. [Loading MPS to PDF converter (version 2006.09.02).]
  619. ) (/texlive/2016/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty
  620. (/texlive/2016/texmf-dist/tex/latex/oberdiek/grfext.sty)
  621. (/texlive/2016/texmf-config/tex/latex/latexconfig/epstopdf-sys.cfg))
  622. (./main.out) (./main.out)
  623. Underfull \hbox (badness 10000) in paragraph at lines 67--67
  624.  
  625. <experiment_setup.png, id=18, 673.51625pt x 200.75pt>
  626. <use experiment_setup.png> (/texlive/2016/texmf-dist/tex/latex/amsfonts/umsa.fd
  627. ) (/texlive/2016/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/texlive/2016/texmf-
  628. var/fonts/map/pdftex/updmap/pdftex.map}]
  629. <benign_ex_he.png, id=50, 256.96pt x 256.96pt> <use benign_ex_he.png>
  630. <tumour_ex_he.png, id=51, 256.96pt x 256.96pt> <use tumour_ex_he.png>
  631. <benign_ex_ihc.png, id=52, 256.96pt x 256.96pt> <use benign_ex_ihc.png>
  632. <tumour_ex_ihc.png, id=53, 256.96pt x 256.96pt> <use tumour_ex_ihc.png>
  633. <benign_ex_supervised_overlay.png, id=54, 346.896pt x 346.896pt>
  634. <use benign_ex_supervised_overlay.png>
  635. <tumour_ex_supervised_overlay.png, id=55, 346.896pt x 346.896pt>
  636. <use tumour_ex_supervised_overlay.png>
  637. <benign_ex_semi_overlay.png, id=56, 346.896pt x 346.896pt>
  638. <use benign_ex_semi_overlay.png>
  639. <tumour_ex_semi_overlay.png, id=57, 346.896pt x 346.896pt>
  640. <use tumour_ex_semi_overlay.png>
  641. Underfull \hbox (badness 10000) in paragraph at lines 134--134
  642. []\OT1/cmr/m/n/9 Semi-
  643. <benign_ex_cluster_overlay.png, id=58, 346.896pt x 346.896pt>
  644. <use benign_ex_cluster_overlay.png>
  645. <tumour_ex_cluster_overlay.png, id=59, 346.896pt x 346.896pt>
  646. <use tumour_ex_cluster_overlay.png> [2 <./experiment_setup.png>] [3 <./benign_e
  647. x_he.png> <./tumour_ex_he.png> <./benign_ex_ihc.png> <./tumour_ex_ihc.png> <./b
  648. enign_ex_supervised_overlay.png> <./tumour_ex_supervised_overlay.png> <./benign
  649. _ex_semi_overlay.png> <./tumour_ex_semi_overlay.png> <./benign_ex_cluster_overl
  650. ay.png> <./tumour_ex_cluster_overlay.png>] [4] (./main.bbl) [5] (./main.aux) )
  651. (\end occurred inside a group at level 1)
  652.  
  653. ### simple group (level 1) entered at line 1061 ({)
  654. ### bottom level
  655. (see the transcript file for additional information){/texlive/2016/texmf-dist/f
  656. onts/enc/dvips/cm-super/cm-super-ts1.enc}</texlive/2016/texmf-dist/fonts/type1/
  657. public/amsfonts/cm/cmbx10.pfb></texlive/2016/texmf-dist/fonts/type1/public/amsf
  658. onts/cm/cmbx12.pfb></texlive/2016/texmf-dist/fonts/type1/public/amsfonts/cm/cmb
  659. x9.pfb></texlive/2016/texmf-dist/fonts/type1/public/amsfonts/cm/cmcsc10.pfb></t
  660. exlive/2016/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb></texlive/2016
  661. /texmf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb></texlive/2016/texmf-dist/
  662. fonts/type1/public/amsfonts/cm/cmr10.pfb></texlive/2016/texmf-dist/fonts/type1/
  663. public/amsfonts/cm/cmr8.pfb></texlive/2016/texmf-dist/fonts/type1/public/amsfon
  664. ts/cm/cmr9.pfb></texlive/2016/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.
  665. pfb></texlive/2016/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy9.pfb></texliv
  666. e/2016/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb></texlive/2016/texm
  667. f-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb></texlive/2016/texmf-dist/fonts
  668. /type1/public/cm-super/sfbx0900.pfb></texlive/2016/texmf-dist/fonts/type1/publi
  669. c/cm-super/sfrm0800.pfb>
  670. Output written on main.pdf (5 pages, 4338941 bytes).
  671. Transcript written on main.log.
  672.  
  673. [verbose]: Removing (La)TeX AUX file called 'main.aux' (1558016677 >= 1558016672)
  674. [verbose]: Removing (La)TeX AUX file called 'main.out' (1558016677 >= 1558016672)
  675. [verbose]: now stamping pdf file 'main.pdf' with stamp 'arXiv:submit/2680053 [cs.CV] 16 May 2019'
  676. [verbose]: stamped pdf file
  677. [verbose]: PDFTEX paper, check "/opt_arxiv/arXivTeX/submissions/2680053/".
  678.  
  679. [verbose]: All done.
  680.  
  681. [verbose]: AutoTeX process succeeded
  682. [verbose]: AutoTeX made a pdf.
  683. [verbose]: Moving .../2680053/main.pdf => .../2680053/tex_cache/2680053.pdf
  684.  
  685. [verbose]: All generated files successfully moved.
  686. [verbose]: ** AutoTeX job completed. **
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