Advertisement
Not a member of Pastebin yet?
Sign Up,
it unlocks many cool features!
- [sajid@xrm free_space]$ ./ex_modify -ts_type cn -start_in_debugger noxterm -fp_trap
- PETSC: Attaching gdb to ./ex_modify of pid 9686 on xrm
- GNU gdb (GDB) Red Hat Enterprise Linux 7.6.1-100.el7
- Copyright (C) 2013 Free Software Foundation, Inc.
- License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>
- This is free software: you are free to change and redistribute it.
- There is NO WARRANTY, to the extent permitted by law. Type "show copying"
- and "show warranty" for details.
- This GDB was configured as "x86_64-redhat-linux-gnu".
- For bug reporting instructions, please see:
- <http://www.gnu.org/software/gdb/bugs/>...
- Reading symbols from /raid/home/sajid/packages/xwp_petsc/2d/free_space/ex_modify...(no debugging symbols found)...done.
- Attaching to program: /raid/home/sajid/packages/xwp_petsc/2d/free_space/./ex_modify, process 9686
- Reading symbols from /lib64/libpthread.so.0...(no debugging symbols found)...done.
- [Thread debugging using libthread_db enabled]
- Using host libthread_db library "/lib64/libthread_db.so.1".
- Loaded symbols for /lib64/libpthread.so.0
- Reading symbols from /lib64/libm.so.6...(no debugging symbols found)...done.
- Loaded symbols for /lib64/libm.so.6
- Reading symbols from /lib64/libdl.so.2...(no debugging symbols found)...done.
- Loaded symbols for /lib64/libdl.so.2
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/petsc-develop-2u6vuwagkoczyvnpsubzrubmtmpfhhkj/lib/libpetsc.so.3.010...(no debugging symbols found)...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/petsc-develop-2u6vuwagkoczyvnpsubzrubmtmpfhhkj/lib/libpetsc.so.3.010
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/superlu-dist-develop-cpspq4ca2hnyvhx4mz7zsupbj3do6md3/lib/libsuperlu_dist.so.6...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/superlu-dist-develop-cpspq4ca2hnyvhx4mz7zsupbj3do6md3/lib/libsuperlu_dist.so.6
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/intel-mkl-2019.0.117-wzqlcijwx7odz2x5chembudo5leqpfh2/compilers_and_libraries_2019.0.117/linux/mkl/lib/intel64/libmkl_intel_lp64.so...(no debugging symbols found)...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/intel-mkl-2019.0.117-wzqlcijwx7odz2x5chembudo5leqpfh2/compilers_and_libraries_2019.0.117/linux/mkl/lib/intel64/libmkl_intel_lp64.so
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/intel-mkl-2019.0.117-wzqlcijwx7odz2x5chembudo5leqpfh2/compilers_and_libraries_2019.0.117/linux/mkl/lib/intel64/libmkl_sequential.so...(no debugging symbols found)...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/intel-mkl-2019.0.117-wzqlcijwx7odz2x5chembudo5leqpfh2/compilers_and_libraries_2019.0.117/linux/mkl/lib/intel64/libmkl_sequential.so
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/intel-mkl-2019.0.117-wzqlcijwx7odz2x5chembudo5leqpfh2/compilers_and_libraries_2019.0.117/linux/mkl/lib/intel64/libmkl_core.so...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/intel-mkl-2019.0.117-wzqlcijwx7odz2x5chembudo5leqpfh2/compilers_and_libraries_2019.0.117/linux/mkl/lib/intel64/libmkl_core.so
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/hdf5-1.10.4-ltstvsxvyjue2gxfegi4nvr6c5xg3zww/lib/libhdf5hl_fortran.so.100...(no debugging symbols found)...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/hdf5-1.10.4-ltstvsxvyjue2gxfegi4nvr6c5xg3zww/lib/libhdf5hl_fortran.so.100
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/hdf5-1.10.4-ltstvsxvyjue2gxfegi4nvr6c5xg3zww/lib/libhdf5_fortran.so.100...(no debugging symbols found)...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/hdf5-1.10.4-ltstvsxvyjue2gxfegi4nvr6c5xg3zww/lib/libhdf5_fortran.so.100
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/hdf5-1.10.4-ltstvsxvyjue2gxfegi4nvr6c5xg3zww/lib/libhdf5_hl.so.100...(no debugging symbols found)...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/hdf5-1.10.4-ltstvsxvyjue2gxfegi4nvr6c5xg3zww/lib/libhdf5_hl.so.100
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/hdf5-1.10.4-ltstvsxvyjue2gxfegi4nvr6c5xg3zww/lib/libhdf5.so.103...(no debugging symbols found)...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/hdf5-1.10.4-ltstvsxvyjue2gxfegi4nvr6c5xg3zww/lib/libhdf5.so.103
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/parmetis-4.0.3-hw3j2ss7mjsc5x5f2gaflirnuufzptil/lib/libparmetis.so...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/parmetis-4.0.3-hw3j2ss7mjsc5x5f2gaflirnuufzptil/lib/libparmetis.so
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/metis-5.1.0-nhgzn4kjskctzmzv35mstvd34nj2ugek/lib/libmetis.so...(no debugging symbols found)...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/metis-5.1.0-nhgzn4kjskctzmzv35mstvd34nj2ugek/lib/libmetis.so
- Reading symbols from /lib64/libz.so.1...Reading symbols from /lib64/libz.so.1...(no debugging symbols found)...done.
- (no debugging symbols found)...done.
- Loaded symbols for /lib64/libz.so.1
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/libx11-1.6.5-fq4iuwdxjyckf5eqsvnistset6p4hrzm/lib/libX11.so.6...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/libx11-1.6.5-fq4iuwdxjyckf5eqsvnistset6p4hrzm/lib/libX11.so.6
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.3.0-qrjpi76aeo4bysagruwwfii6oneh56lj/lib64/libstdc++.so.6...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.3.0-qrjpi76aeo4bysagruwwfii6oneh56lj/lib64/libstdc++.so.6
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/mpich-3.3-z5uiwmx24jylnivuhlnqjjmm674ozj6x/lib/libmpifort.so.12...(no debugging symbols found)...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/mpich-3.3-z5uiwmx24jylnivuhlnqjjmm674ozj6x/lib/libmpifort.so.12
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/mpich-3.3-z5uiwmx24jylnivuhlnqjjmm674ozj6x/lib/libmpi.so.12...(no debugging symbols found)...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/mpich-3.3-z5uiwmx24jylnivuhlnqjjmm674ozj6x/lib/libmpi.so.12
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.3.0-qrjpi76aeo4bysagruwwfii6oneh56lj/lib64/libgfortran.so.4...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.3.0-qrjpi76aeo4bysagruwwfii6oneh56lj/lib64/libgfortran.so.4
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.3.0-qrjpi76aeo4bysagruwwfii6oneh56lj/lib64/libgcc_s.so.1...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.3.0-qrjpi76aeo4bysagruwwfii6oneh56lj/lib64/libgcc_s.so.1
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.3.0-qrjpi76aeo4bysagruwwfii6oneh56lj/lib64/libquadmath.so.0...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.3.0-qrjpi76aeo4bysagruwwfii6oneh56lj/lib64/libquadmath.so.0
- Reading symbols from /lib64/libc.so.6...(no debugging symbols found)...done.
- Loaded symbols for /lib64/libc.so.6
- Reading symbols from /lib64/ld-linux-x86-64.so.2...(no debugging symbols found)...done.
- Loaded symbols for /lib64/ld-linux-x86-64.so.2
- Reading symbols from /lib64/liblapack.so.3...Reading symbols from /lib64/liblapack.so.3...(no debugging symbols found)...done.
- (no debugging symbols found)...done.
- Loaded symbols for /lib64/liblapack.so.3
- Reading symbols from /lib64/libblas.so.3...Reading symbols from /lib64/libblas.so.3...(no debugging symbols found)...done.
- (no debugging symbols found)...done.
- Loaded symbols for /lib64/libblas.so.3
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/mpich-3.3-z5uiwmx24jylnivuhlnqjjmm674ozj6x/lib/libmpicxx.so.12...(no debugging symbols found)...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/mpich-3.3-z5uiwmx24jylnivuhlnqjjmm674ozj6x/lib/libmpicxx.so.12
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.3.0-qrjpi76aeo4bysagruwwfii6oneh56lj/lib64/libgomp.so.1...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.3.0-qrjpi76aeo4bysagruwwfii6oneh56lj/lib64/libgomp.so.1
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/libxcb-1.13-w3g6d3ulogwz3cxf5brw3ymiw22apkax/lib/libxcb.so.1...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/libxcb-1.13-w3g6d3ulogwz3cxf5brw3ymiw22apkax/lib/libxcb.so.1
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/libxau-1.0.8-kv6fes6sr7z5mu6gkmpanmzx2tmbaroc/lib/libXau.so.6...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/libxau-1.0.8-kv6fes6sr7z5mu6gkmpanmzx2tmbaroc/lib/libXau.so.6
- Reading symbols from /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/libxdmcp-1.1.2-pogqqdhqufmv567ch6n4eipdw7wgpdui/lib/libXdmcp.so.6...done.
- Loaded symbols for /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-7.3.0/libxdmcp-1.1.2-pogqqdhqufmv567ch6n4eipdw7wgpdui/lib/libXdmcp.so.6
- Reading symbols from /lib64/libudev.so.1...Reading symbols from /lib64/libudev.so.1...(no debugging symbols found)...done.
- (no debugging symbols found)...done.
- Loaded symbols for /lib64/libudev.so.1
- Reading symbols from /lib64/libxml2.so.2...Reading symbols from /lib64/libxml2.so.2...(no debugging symbols found)...done.
- (no debugging symbols found)...done.
- Loaded symbols for /lib64/libxml2.so.2
- Reading symbols from /lib64/librt.so.1...(no debugging symbols found)...done.
- Loaded symbols for /lib64/librt.so.1
- Reading symbols from /lib64/libgfortran.so.3...(no debugging symbols found)...done.
- Loaded symbols for /lib64/libgfortran.so.3
- Reading symbols from /lib64/libcap.so.2...Reading symbols from /lib64/libcap.so.2...(no debugging symbols found)...done.
- (no debugging symbols found)...done.
- Loaded symbols for /lib64/libcap.so.2
- Reading symbols from /lib64/libdw.so.1...Reading symbols from /lib64/libdw.so.1...(no debugging symbols found)...done.
- (no debugging symbols found)...done.
- Loaded symbols for /lib64/libdw.so.1
- Reading symbols from /lib64/liblzma.so.5...Reading symbols from /lib64/liblzma.so.5...(no debugging symbols found)...done.
- (no debugging symbols found)...done.
- Loaded symbols for /lib64/liblzma.so.5
- Reading symbols from /lib64/libattr.so.1...Reading symbols from /lib64/libattr.so.1...(no debugging symbols found)...done.
- (no debugging symbols found)...done.
- Loaded symbols for /lib64/libattr.so.1
- Reading symbols from /lib64/libelf.so.1...Reading symbols from /lib64/libelf.so.1...(no debugging symbols found)...done.
- (no debugging symbols found)...done.
- Loaded symbols for /lib64/libelf.so.1
- Reading symbols from /lib64/libbz2.so.1...Reading symbols from /lib64/libbz2.so.1...(no debugging symbols found)...done.
- (no debugging symbols found)...done.
- Loaded symbols for /lib64/libbz2.so.1
- 0x00007f2575d55190 in __nanosleep_nocancel () from /lib64/libc.so.6
- warning: File "/raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.3.0-qrjpi76aeo4bysagruwwfii6oneh56lj/lib64/libstdc++.so.6.0.24-gdb.py" auto-loading has been declined by your `auto-load safe-path' set to "$debugdir:$datadir/auto-load:/usr/bin/mono-gdb.py".
- To enable execution of this file add
- add-auto-load-safe-path /raid/home/sajid/packages/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.3.0-qrjpi76aeo4bysagruwwfii6oneh56lj/lib64/libstdc++.so.6.0.24-gdb.py
- line to your configuration file "/raid/home/sajid/.gdbinit".
- To completely disable this security protection add
- set auto-load safe-path /
- line to your configuration file "/raid/home/sajid/.gdbinit".
- For more information about this security protection see the
- "Auto-loading safe path" section in the GDB manual. E.g., run from the shell:
- info "(gdb)Auto-loading safe path"
- Missing separate debuginfos, use: debuginfo-install blas-3.4.2-8.el7.x86_64 bzip2-libs-1.0.6-13.el7.x86_64 elfutils-libelf-0.168-8.el7.x86_64 elfutils-libs-0.168-8.el7.x86_64 glibc-2.17-196.el7.x86_64 lapack-3.4.2-8.el7.x86_64 libattr-2.4.46-12.el7.x86_64 libcap-2.22-9.el7.x86_64 libgfortran-4.8.5-16.el7.x86_64 libxml2-2.9.1-6.el7_2.3.x86_64 systemd-libs-219-42.el7_4.4.x86_64 xz-libs-5.2.2-1.el7.x86_64 zlib-1.2.7-17.el7.x86_64
- (gdb)
Advertisement
Add Comment
Please, Sign In to add comment
Advertisement