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- library(raster)
- MODIS <- stack('path/to/modis stack.extension')
- Masks <- stack('path/to/mask stack.extension')
- MODIS_masked <- mapply(FUN = function(x,mask) mask(x = x, mask = mask),x = as.list(MODIS), mask = as.list(Masks))
- MODIS_masked <- stack(MODIS_masked)
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