\input{t_boot.tex}
\input{custom_commands.tex}
% PUT FIGURES AT END.
%\usepackage[nomarkers,figuresonly]{endfloat}


% PUT FIGURES AT END.
%\renewcommand{\floatpagefraction}{.7}

%%ADDED 06/01/2017
%\newcommand\myworries[1]{\textcolor{red}{#1}}
%\newcommand\draft[1]{\textcolor{blue}{#1}}
%\newcommand\fullwidth{ 1.0\textwidth}
%% Makes a slightly shorter version of the overline.
%\newcommand*\mean[1]{%
%   \vbox{%
%       \hrule height 0.3pt%                  % Line above with certain width
%       \kern0.25ex%                          % Distance between line and content
%       \hbox{%
%           \kern-0.1em%                        % Distance between content and left side of box, negative values for lines shorter than content
%           \ifmmode#1\else\ensuremath{#1}\fi%  % The content, typeset in dependence of mode
%           \kern-0.1em%                        % Distance between content and left side of box, negative values for lines shorter than content
%       }% end of hbox
%   }% end of vbox
%}
%
%% CONSTANTS
%\newcommand{\vorticity}{$\langle\overline{\Omega_{x}}\rangle_{t}$}
%\newcommand{\umean}{$\langle\bar{u}\rangle_{t}$}
%\newcommand{\secshear}{$\langle\mean{u'w'}\rangle_{t}$}
%\newcommand{\prefconc}{$\xi_{p}(x)$}

\graphicspath {{gfx/}}

\begin{document}
\eject
\pagestyle{empty}
\include{title}
%   \include{dec}
\singlespacing
   \include{abs}
%   \include{publ}
%   \include{dedicate}
% ACKNOLOEDGEMENTS
\doublespacing
\include{ack}
%   \include{overview}
% NOMENCLATURE
\setcounter{page}{1}
\pagestyle{plain}
\renewcommand{\thepage}{\Roman{page}}
% TABLE OF CONTENTS
\singlespacing
\tableofcontents

% LIST OF TABLES.
\listoftables
% LIST OF FIGURES
\listoffigures
% NOMENCLATURE
\include{nomen}

\onehalfspacing

\eject
\newpage
\renewcommand{\thepage}{\arabic{page}}
\setcounter{chapter}{0}

%Headers and footers
\pagestyle{fancy}
\rhead{\nouppercase{\rightmark}}
\lhead{\nouppercase{Chapter \thechapter.}}


% HEADER
\renewcommand{\chaptermark}[1]{%
\markboth{\thechapter.\ #1}{}}

\setcounter{page}{1}

% CHAPTERS
\include{introduction}
\include{literature_2}
\include{numerical2}
%\include{masutani_2}
\include{masutani3}
%\include{bt1_1}
\include{bt2_3}
\include{bt3}
\include{conclusions2}

\pagestyle{empty} % EMPTY PAGE???
\pagestyle{plain} % DONT KNOW?

\bibliographystyle{unsrt}
\bibliography{mendeley-library/library2} % BIBLIOGRAPHY

%\include{append2}
\pagestyle{empty}
\end{document}