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dinkhaA aze_ln + ivc pass

misnomer001
Aug 27th, 2022
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  1. qpAdm: parameter file: parqpa2
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: dinkha_fstats
  5. popleft: left
  6. popright: right
  7. details: YES
  8. allsnps: YES
  9. inbreed: NO
  10. oldallsnps: NO
  11. ## qpAdm version: 1520
  12. seed: 1147884660
  13. inbreed set NO
  14. inbreed set NO
  15.  
  16. left pops:
  17. IRN_DinkhaTepe_BIA_A
  18. Azerbaijan_Caucasus_lowlands_LN
  19. IVCp
  20.  
  21. right pops:
  22. Mbuti.DG
  23. Turkey_N
  24. Russia_MLBA_Sintashta
  25. ONG.SG
  26. Tarim_EMBA1
  27. PPN
  28. Russia_Samara_EBA_Yamnaya
  29. CHG
  30. EHG
  31. Iran_HajjiFiruz_N
  32. Serbia_IronGates_Mesolithic
  33. Iran_GanjDareh_N
  34.  
  35. codimension 1
  36. f4info:
  37. f4rank: 1 dof: 10 chisq: 15.327 tail: 0.120598099 dofdiff: 12 chisqdiff: -15.327 taildiff: 1
  38. B:
  39. scale 1.000
  40. Turkey_N 1.830
  41. Russia_MLBA_Sintashta 0.851
  42. ONG.SG -1.049
  43. Tarim_EMBA1 -0.736
  44. PPN 1.723
  45. Russia_Samara_EBA_Yamnaya 0.442
  46. CHG 0.539
  47. EHG 0.080
  48. Iran_HajjiFiruz_N 1.039
  49. Serbia_IronGates_Mesolithic 0.863
  50. Iran_GanjDareh_N -0.015
  51. A:
  52. scale 344.233
  53. Azerbaijan_Caucasus_lowlands_LN 0.122
  54. IVCp -1.409
  55.  
  56.  
  57. full rank
  58. f4info:
  59. f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 10 chisqdiff: 15.327 taildiff: 0.120598099
  60. B:
  61. scale 1909.122 243.284
  62. Turkey_N 1.181 -1.833
  63. Russia_MLBA_Sintashta 0.909 -0.847
  64. ONG.SG -1.226 1.021
  65. Tarim_EMBA1 0.539 0.764
  66. PPN 0.767 -1.739
  67. Russia_Samara_EBA_Yamnaya 0.772 -0.441
  68. CHG 1.994 -0.484
  69. EHG 0.675 -0.074
  70. Iran_HajjiFiruz_N 0.988 -1.037
  71. Serbia_IronGates_Mesolithic 0.491 -0.873
  72. Iran_GanjDareh_N 0.392 0.017
  73. A:
  74. scale 1.414 1.414
  75. Azerbaijan_Caucasus_lowlands_LN 1.414 0.000
  76. IVCp 0.000 1.414
  77.  
  78.  
  79. best coefficients: 0.920 0.080
  80. totmean: 0.920 0.080
  81. boot mean: 0.921 0.079
  82. std. errors: 0.019 0.019
  83.  
  84. error covariance (* 1,000,000)
  85. 360 -360
  86. -360 360
  87.  
  88.  
  89. summ: IRN_DinkhaTepe_BIA_A 2 0.120598 0.921 0.079 360 -360 360
  90.  
  91. fixed pat wt dof chisq tail prob
  92. 00 0 10 15.327 0.120598 0.920 0.080
  93. 01 1 11 31.096 0.0010637 1.000 0.000
  94. 10 1 11 2278.992 0 0.000 1.000
  95. best pat: 00 0.120598 - -
  96. best pat: 01 0.0010637 chi(nested): 15.769 p-value for nested model: 7.15694e-05
  97.  
  98. coeffs: 0.920 0.080
  99.  
  100. ## dscore:: f_4(Base, Fit, Rbase, right2)
  101. ## genstat:: f_4(Base, Fit, right1, right2)
  102.  
  103. details: Azerbaijan_Caucasus_lowlands_LN Turkey_N 0.000619 2.255022
  104. details: IVCp Turkey_N -0.007534 -29.223801
  105. dscore: Turkey_N f4: -0.000030 Z: -0.116243
  106.  
  107. details: Azerbaijan_Caucasus_lowlands_LN Russia_MLBA_Sintashta 0.000476 1.980851
  108. details: IVCp Russia_MLBA_Sintashta -0.003482 -14.315364
  109. dscore: Russia_MLBA_Sintashta f4: 0.000161 Z: 0.709569
  110.  
  111. details: Azerbaijan_Caucasus_lowlands_LN ONG.SG -0.000642 -2.122740
  112. details: IVCp ONG.SG 0.004196 14.613662
  113. dscore: ONG.SG f4: -0.000257 Z: -0.903735
  114.  
  115. details: Azerbaijan_Caucasus_lowlands_LN Tarim_EMBA1 0.000282 0.846673
  116. details: IVCp Tarim_EMBA1 0.003142 10.116517
  117. dscore: Tarim_EMBA1 f4: 0.000510 Z: 1.626590
  118.  
  119. details: Azerbaijan_Caucasus_lowlands_LN PPN 0.000402 1.282182
  120. details: IVCp PPN -0.007147 -24.775317
  121. dscore: PPN f4: -0.000199 Z: -0.675357
  122.  
  123. details: Azerbaijan_Caucasus_lowlands_LN Russia_Samara_EBA_Yamnaya 0.000404 1.517212
  124. details: IVCp Russia_Samara_EBA_Yamnaya -0.001814 -7.265912
  125. dscore: Russia_Samara_EBA_Yamnaya f4: 0.000228 Z: 0.906787
  126.  
  127. details: Azerbaijan_Caucasus_lowlands_LN CHG 0.001044 2.911726
  128. details: IVCp CHG -0.001990 -6.374556
  129. dscore: CHG f4: 0.000803 Z: 2.380404
  130.  
  131. details: Azerbaijan_Caucasus_lowlands_LN EHG 0.000353 1.038628
  132. details: IVCp EHG -0.000304 -0.998511
  133. dscore: EHG f4: 0.000301 Z: 0.936212
  134.  
  135. details: Azerbaijan_Caucasus_lowlands_LN Iran_HajjiFiruz_N 0.000518 1.596538
  136. details: IVCp Iran_HajjiFiruz_N -0.004264 -14.157921
  137. dscore: Iran_HajjiFiruz_N f4: 0.000137 Z: 0.448646
  138.  
  139. details: Azerbaijan_Caucasus_lowlands_LN Serbia_IronGates_Mesolithic 0.000257 0.912958
  140. details: IVCp Serbia_IronGates_Mesolithic -0.003588 -12.940525
  141. dscore: Serbia_IronGates_Mesolithic f4: -0.000049 Z: -0.184564
  142.  
  143. details: Azerbaijan_Caucasus_lowlands_LN Iran_GanjDareh_N 0.000205 0.705646
  144. details: IVCp Iran_GanjDareh_N 0.000068 0.259445
  145. dscore: Iran_GanjDareh_N f4: 0.000194 Z: 0.709030
  146.  
  147. gendstat: Mbuti.DG Turkey_N -0.116
  148. gendstat: Mbuti.DG Russia_MLBA_Sintashta 0.710
  149. gendstat: Mbuti.DG ONG.SG -0.904
  150. gendstat: Mbuti.DG Tarim_EMBA1 1.627
  151. gendstat: Mbuti.DG PPN -0.675
  152. gendstat: Mbuti.DG Russia_Samara_EBA_Yamnaya 0.907
  153. gendstat: Mbuti.DG CHG 2.380
  154. gendstat: Mbuti.DG EHG 0.936
  155. gendstat: Mbuti.DG Iran_HajjiFiruz_N 0.449
  156. gendstat: Mbuti.DG Serbia_IronGates_Mesolithic -0.185
  157. gendstat: Mbuti.DG Iran_GanjDareh_N 0.709
  158. gendstat: Turkey_N Russia_MLBA_Sintashta 1.155
  159. gendstat: Turkey_N ONG.SG -0.815
  160. gendstat: Turkey_N Tarim_EMBA1 1.775
  161. gendstat: Turkey_N PPN -0.856
  162. gendstat: Turkey_N Russia_Samara_EBA_Yamnaya 1.236
  163. gendstat: Turkey_N CHG 2.643
  164. gendstat: Turkey_N EHG 1.198
  165. gendstat: Turkey_N Iran_HajjiFiruz_N 0.649
  166. gendstat: Turkey_N Serbia_IronGates_Mesolithic -0.098
  167. gendstat: Turkey_N Iran_GanjDareh_N 0.845
  168. gendstat: Russia_MLBA_Sintashta ONG.SG -1.655
  169. gendstat: Russia_MLBA_Sintashta Tarim_EMBA1 1.391
  170. gendstat: Russia_MLBA_Sintashta PPN -1.554
  171. gendstat: Russia_MLBA_Sintashta Russia_Samara_EBA_Yamnaya 0.450
  172. gendstat: Russia_MLBA_Sintashta CHG 2.259
  173. gendstat: Russia_MLBA_Sintashta EHG 0.576
  174. gendstat: Russia_MLBA_Sintashta Iran_HajjiFiruz_N -0.095
  175. gendstat: Russia_MLBA_Sintashta Serbia_IronGates_Mesolithic -1.252
  176. gendstat: Russia_MLBA_Sintashta Iran_GanjDareh_N 0.144
  177. gendstat: ONG.SG Tarim_EMBA1 2.465
  178. gendstat: ONG.SG PPN 0.182
  179. gendstat: ONG.SG Russia_Samara_EBA_Yamnaya 1.807
  180. gendstat: ONG.SG CHG 3.082
  181. gendstat: ONG.SG EHG 1.742
  182. gendstat: ONG.SG Iran_HajjiFiruz_N 1.234
  183. gendstat: ONG.SG Serbia_IronGates_Mesolithic 0.734
  184. gendstat: ONG.SG Iran_GanjDareh_N 1.479
  185. gendstat: Tarim_EMBA1 PPN -2.027
  186. gendstat: Tarim_EMBA1 Russia_Samara_EBA_Yamnaya -1.130
  187. gendstat: Tarim_EMBA1 CHG 0.820
  188. gendstat: Tarim_EMBA1 EHG -0.747
  189. gendstat: Tarim_EMBA1 Iran_HajjiFiruz_N -1.107
  190. gendstat: Tarim_EMBA1 Serbia_IronGates_Mesolithic -1.955
  191. gendstat: Tarim_EMBA1 Iran_GanjDareh_N -1.025
  192. gendstat: PPN Russia_Samara_EBA_Yamnaya 1.551
  193. gendstat: PPN CHG 2.782
  194. gendstat: PPN EHG 1.528
  195. gendstat: PPN Iran_HajjiFiruz_N 1.102
  196. gendstat: PPN Serbia_IronGates_Mesolithic 0.603
  197. gendstat: PPN Iran_GanjDareh_N 1.283
  198. gendstat: Russia_Samara_EBA_Yamnaya CHG 1.960
  199. gendstat: Russia_Samara_EBA_Yamnaya EHG 0.295
  200. gendstat: Russia_Samara_EBA_Yamnaya Iran_HajjiFiruz_N -0.336
  201. gendstat: Russia_Samara_EBA_Yamnaya Serbia_IronGates_Mesolithic -1.415
  202. gendstat: Russia_Samara_EBA_Yamnaya Iran_GanjDareh_N -0.137
  203. gendstat: CHG EHG -1.456
  204. gendstat: CHG Iran_HajjiFiruz_N -1.962
  205. gendstat: CHG Serbia_IronGates_Mesolithic -2.705
  206. gendstat: CHG Iran_GanjDareh_N -1.952
  207. gendstat: EHG Iran_HajjiFiruz_N -0.496
  208. gendstat: EHG Serbia_IronGates_Mesolithic -1.404
  209. gendstat: EHG Iran_GanjDareh_N -0.350
  210. gendstat: Iran_HajjiFiruz_N Serbia_IronGates_Mesolithic -0.679
  211. gendstat: Iran_HajjiFiruz_N Iran_GanjDareh_N 0.209
  212. gendstat: Serbia_IronGates_Mesolithic Iran_GanjDareh_N 0.901
  213.  
  214. ##end of qpAdm: 2.154 seconds cpu 0.688 Mbytes in use
  215.  
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