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  1. INFO:root:checking if ['LC08_L1TP_019038_20171106_20171121_01_T1', 'LC08_L1TP_019039_20171106_20171121_01_T1', 'LC08_L1TP_020039_20171113_20171122_01_T1'] should blend
  2. INFO:root:paths [19, 20] are adjacent, blend needed
  3. INFO:root:fall_blend is blendable
  4. INFO:root:Found 8 keys
  5. [u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/LC08_L1TP_019038_20171106_20171121_01_T1_BQA.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B2.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B3.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B4.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B5.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B6.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B7.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B8.TIF']
  6. INFO:root:Found 8 keys
  7. [u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/LC08_L1TP_019039_20171106_20171121_01_T1_BQA.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B2.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B3.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B4.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B5.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B6.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B7.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B8.TIF']
  8. INFO:root:Found 8 keys
  9. [u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/LC08_L1TP_020039_20171113_20171122_01_T1_BQA.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B2.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B3.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B4.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B5.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B6.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B7.TIF', u'blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B8.TIF']
  10. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/LC08_L1TP_019038_20171106_20171121_01_T1_BQA.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/LC08_L1TP_019038_20171106_20171121_01_T1_BQA.TIF'
  11. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B2.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B2.TIF'
  12. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B3.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B3.TIF'
  13. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B4.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B4.TIF'
  14. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B5.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B5.TIF'
  15. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B6.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B6.TIF'
  16. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B7.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B7.TIF'
  17. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019038-20171106-20171121-01-T1/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B8.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019038_20171106_20171121_01_T1_B8.TIF'
  18. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/LC08_L1TP_019039_20171106_20171121_01_T1_BQA.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/LC08_L1TP_019039_20171106_20171121_01_T1_BQA.TIF'
  19. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B2.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B2.TIF'
  20. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B3.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B3.TIF'
  21. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B4.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B4.TIF'
  22. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B5.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B5.TIF'
  23. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B6.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B6.TIF'
  24. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B7.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B7.TIF'
  25. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-019039-20171106-20171121-01-T1/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B8.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_019039_20171106_20171121_01_T1_B8.TIF'
  26. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/LC08_L1TP_020039_20171113_20171122_01_T1_BQA.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/LC08_L1TP_020039_20171113_20171122_01_T1_BQA.TIF'
  27. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B2.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B2.TIF'
  28. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B3.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B3.TIF'
  29. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B4.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B4.TIF'
  30. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B5.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B5.TIF'
  31. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B6.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B6.TIF'
  32. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B7.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B7.TIF'
  33. INFO:drjob.utils.s3:Downloading u's3://silviaterra-sequoia/blend-test-ga-2017-ware2/images/raw/landsat/LC08-L1TP-020039-20171113-20171122-01-T1/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B8.TIF' to u'/tmp/tmpHKKWJ4/landsatxVb4YZ/TOAR_LC08_L1TP_020039_20171113_20171122_01_T1_B8.TIF'
  34. INFO:root:Running R command: Rscript /opt/landsat_blender/exec/blend_models.R --rawDir /tmp/tmpHKKWJ4/landsatxVb4YZ --outDir /tmp/tmpHKKWJ4/r-output76MvdC
  35.  
  36.  
  37. processing file: blend_models.Rmd
  38. Quitting from lines 512-558 (blend_models.Rmd)
  39. Error in rowMeans(amTallStack[, grep(pattern = "B2", x = names(amTallStack))]) :
  40. 'x' must be an array of at least two dimensions
  41. Calls: render ... withCallingHandlers -> withVisible -> eval -> eval -> rowMeans
  42. Execution halted
  43. Traceback (most recent call last):
  44. File "/usr/lib/python2.7/runpy.py", line 174, in _run_module_as_main
  45. "__main__", fname, loader, pkg_name)
  46. File "/usr/lib/python2.7/runpy.py", line 72, in _run_code
  47. exec code in run_globals
  48. File "/opt/sequoia/sequoia/prep/landsat/scripts/build_blender_model.py", line 94, in <module>
  49. BuildBlenderModel().run()
  50. File "/usr/local/lib/python2.7/dist-packages/drjob/slave.py", line 72, in run
  51. io.write_lines(self.out_file, self.process())
  52. File "/usr/local/lib/python2.7/dist-packages/drjob/utils/io.py", line 29, in write_lines
  53. for v in get_iterable(values):
  54. File "/opt/sequoia/sequoia/prep/landsat/scripts/build_blender_model.py", line 45, in run
  55. '--outDir', r_output_dir)
  56. File "sequoia/utils/R.py", line 41, in run_r_cmd_in_dir
  57. raise Exception('Error running R script: %s' % cmd)
  58. Exception: Error running R script: Rscript /opt/landsat_blender/exec/blend_models.R --rawDir /tmp/tmpHKKWJ4/landsatxVb4YZ --outDir /tmp/tmpHKKWJ4/r-output76MvdC
  59.  
  60. [ec2-user@ip-10-65-140-74 sequoia]$
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