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  1. <?xml version="1.0" encoding="UTF-8"?>
  2. <sbml xmlns="http://www.sbml.org/sbml/level1" level="1" version="2">
  3. <model name="odefymodel">
  4. <listOfCompartments>
  5. <compartment name="comp1"/>
  6. </listOfCompartments>
  7. <listOfSpecies>
  8. <species name="a" compartment="comp1"/>
  9. <species name="b" compartment="comp1"/>
  10. </listOfSpecies>
  11. <listOfReactions>
  12. <reaction name="reaction_a" reversible="false">
  13. <listOfReactants></listOfReactants>
  14. <listOfProducts><speciesReference species="a"/></listOfProducts>
  15. <listOfModifiers>
  16. <speciesReference species="a"/>
  17. <speciesReference species="b"/>
  18. </listOfModifiers>
  19. <kineticLaw formula="((1-a^a_n_a/(a^a_n_a+a_k_a^a_n_a)*(1+a_k_a^a_n_a))*(1-b^a_n_b/(b^a_n_b+a_k_b^a_n_b)*(1+a_k_b^a_n_b))+a^a_n_a/(a^a_n_a+a_k_a^a_n_a)*(1+a_k_a^a_n_a)*(1-b^a_n_b/(b^a_n_b+a_k_b^a_n_b)*(1+a_k_b^a_n_b))+a^a_n_a/(a^a_n_a+a_k_a^a_n_a)*(1+a_k_a^a_n_a)*b^a_n_b/(b^a_n_b+a_k_b^a_n_b)*(1+a_k_b^a_n_b)-a) / a_tau">
  20. <listOfParameters>
  21. <parameter name="a_n_a" value="3.000000"/>
  22. <parameter name="a_k_a" value="0.500000"/>
  23. <parameter name="a_n_b" value="3.000000"/>
  24. <parameter name="a_k_b" value="0.500000"/>
  25. <parameter name="a_tau" value="1.000000"/>
  26. </listOfParameters>
  27. </kineticLaw>
  28. </reaction>
  29. <reaction name="reaction_b" reversible="false">
  30. <listOfReactants></listOfReactants>
  31. <listOfProducts><speciesReference species="b"/></listOfProducts>
  32. <listOfModifiers>
  33. <speciesReference species="b"/>
  34. <speciesReference species="a"/>
  35. </listOfModifiers>
  36. <kineticLaw formula="((1-b^b_n_b/(b^b_n_b+b_k_b^b_n_b)*(1+b_k_b^b_n_b))*(1-a^b_n_a/(a^b_n_a+b_k_a^b_n_a)*(1+b_k_a^b_n_a))+b^b_n_b/(b^b_n_b+b_k_b^b_n_b)*(1+b_k_b^b_n_b)*(1-a^b_n_a/(a^b_n_a+b_k_a^b_n_a)*(1+b_k_a^b_n_a))+b^b_n_b/(b^b_n_b+b_k_b^b_n_b)*(1+b_k_b^b_n_b)*a^b_n_a/(a^b_n_a+b_k_a^b_n_a)*(1+b_k_a^b_n_a)-b) / b_tau">
  37. <listOfParameters>
  38. <parameter name="b_n_b" value="3.000000"/>
  39. <parameter name="b_k_b" value="0.500000"/>
  40. <parameter name="b_n_a" value="3.000000"/>
  41. <parameter name="b_k_a" value="0.500000"/>
  42. <parameter name="b_tau" value="1.000000"/>
  43. </listOfParameters>
  44. </kineticLaw>
  45. </reaction>
  46. </listOfReactions>
  47. </model>
  48. </sbml>
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