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George5610

ninja output

Jun 15th, 2022
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  1. pi@node01:/clusterfs/SU2bin $ ./ninja -C build install
  2. ninja: Entering directory `build'
  3. [1/801] Compiling C object externals/cgns/hdf5/H5make_libsettings.p/H5make_libsettings.c.o
  4. FAILED: externals/cgns/hdf5/H5make_libsettings.p/H5make_libsettings.c.o
  5. cc -Iexternals/cgns/hdf5/H5make_libsettings.p -Iexternals/cgns/hdf5 -I../externals/cgns/hdf5 -fdiagnostics-color=always -std=c99 -O3 -Wno-unused-result -Wno-unused-parameter -Wno-unused-variable -Wno-unused-but-set-variable -Wno-sign-compare -Wno-stringop-overflow -Wno-discarded-qualifiers -Wno-error=maybe-uninitialized -Wno-error=unused-function -Wno-error=unused-label -Wno-pedantic -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_POSIX_C_SOURCE=200809L -D_GNU_SOURCE -MD -MQ externals/cgns/hdf5/H5make_libsettings.p/H5make_libsettings.c.o -MF externals/cgns/hdf5/H5make_libsettings.p/H5make_libsettings.c.o.d -o externals/cgns/hdf5/H5make_libsettings.p/H5make_libsettings.c.o -c ../externals/cgns/hdf5/H5make_libsettings.c
  6. In file included from ../externals/cgns/hdf5/H5private.h:27,
  7. from ../externals/cgns/hdf5/H5make_libsettings.c:35:
  8. ../externals/cgns/hdf5/H5public.h:63:10: fatal error: mpi.h: No such file or directory
  9. 63 | #include <mpi.h>
  10. | ^~~~~~~
  11. compilation terminated.
  12. [2/801] Compiling C object externals/cgns/hdf5/libsu2hdf5.a.p/H5dbg.c.o
  13. FAILED: externals/cgns/hdf5/libsu2hdf5.a.p/H5dbg.c.o
  14. cc -Iexternals/cgns/hdf5/libsu2hdf5.a.p -Iexternals/cgns/hdf5 -I../externals/cgns/hdf5 -fdiagnostics-color=always -std=c99 -O3 -fPIC -Wno-unused-result -Wno-unused-parameter -Wno-unused-variable -Wno-unused-but-set-variable -Wno-sign-compare -Wno-stringop-overflow -Wno-discarded-qualifiers -Wno-error=maybe-uninitialized -Wno-error=unused-function -Wno-error=unused-label -Wno-pedantic -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_POSIX_C_SOURCE=200809L -D_GNU_SOURCE -MD -MQ externals/cgns/hdf5/libsu2hdf5.a.p/H5dbg.c.o -MF externals/cgns/hdf5/libsu2hdf5.a.p/H5dbg.c.o.d -o externals/cgns/hdf5/libsu2hdf5.a.p/H5dbg.c.o -c ../externals/cgns/hdf5/H5dbg.c
  15. In file included from ../externals/cgns/hdf5/H5private.h:27,
  16. from ../externals/cgns/hdf5/H5dbg.c:33:
  17. ../externals/cgns/hdf5/H5public.h:63:10: fatal error: mpi.h: No such file or directory
  18. 63 | #include <mpi.h>
  19. | ^~~~~~~
  20. compilation terminated.
  21. [3/801] Compiling C object externals/cgns/hdf5/libsu2hdf5.a.p/H5checksum.c.o
  22. FAILED: externals/cgns/hdf5/libsu2hdf5.a.p/H5checksum.c.o
  23. cc -Iexternals/cgns/hdf5/libsu2hdf5.a.p -Iexternals/cgns/hdf5 -I../externals/cgns/hdf5 -fdiagnostics-color=always -std=c99 -O3 -fPIC -Wno-unused-result -Wno-unused-parameter -Wno-unused-variable -Wno-unused-but-set-variable -Wno-sign-compare -Wno-stringop-overflow -Wno-discarded-qualifiers -Wno-error=maybe-uninitialized -Wno-error=unused-function -Wno-error=unused-label -Wno-pedantic -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_POSIX_C_SOURCE=200809L -D_GNU_SOURCE -MD -MQ externals/cgns/hdf5/libsu2hdf5.a.p/H5checksum.c.o -MF externals/cgns/hdf5/libsu2hdf5.a.p/H5checksum.c.o.d -o externals/cgns/hdf5/libsu2hdf5.a.p/H5checksum.c.o -c ../externals/cgns/hdf5/H5checksum.c
  24. In file included from ../externals/cgns/hdf5/H5private.h:27,
  25. from ../externals/cgns/hdf5/H5checksum.c:33:
  26. ../externals/cgns/hdf5/H5public.h:63:10: fatal error: mpi.h: No such file or directory
  27. 63 | #include <mpi.h>
  28. | ^~~~~~~
  29. compilation terminated.
  30. [4/801] Compiling C object externals/cgns/hdf5/H5detect.p/H5detect.c.o
  31. FAILED: externals/cgns/hdf5/H5detect.p/H5detect.c.o
  32. cc -Iexternals/cgns/hdf5/H5detect.p -Iexternals/cgns/hdf5 -I../externals/cgns/hdf5 -fdiagnostics-color=always -std=c99 -O3 -Wno-unused-result -Wno-unused-parameter -Wno-unused-variable -Wno-unused-but-set-variable -Wno-sign-compare -Wno-stringop-overflow -Wno-discarded-qualifiers -Wno-error=maybe-uninitialized -Wno-error=unused-function -Wno-error=unused-label -Wno-pedantic -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_POSIX_C_SOURCE=200809L -D_GNU_SOURCE -MD -MQ externals/cgns/hdf5/H5detect.p/H5detect.c.o -MF externals/cgns/hdf5/H5detect.p/H5detect.c.o.d -o externals/cgns/hdf5/H5detect.p/H5detect.c.o -c ../externals/cgns/hdf5/H5detect.c
  33. In file included from ../externals/cgns/hdf5/H5private.h:27,
  34. from ../externals/cgns/hdf5/H5detect.c:45:
  35. ../externals/cgns/hdf5/H5public.h:63:10: fatal error: mpi.h: No such file or directory
  36. 63 | #include <mpi.h>
  37. | ^~~~~~~
  38. compilation terminated.
  39. [5/801] Compiling C object externals/cgns/hdf5/libsu2hdf5.a.p/H5.c.o
  40. FAILED: externals/cgns/hdf5/libsu2hdf5.a.p/H5.c.o
  41. cc -Iexternals/cgns/hdf5/libsu2hdf5.a.p -Iexternals/cgns/hdf5 -I../externals/cgns/hdf5 -fdiagnostics-color=always -std=c99 -O3 -fPIC -Wno-unused-result -Wno-unused-parameter -Wno-unused-variable -Wno-unused-but-set-variable -Wno-sign-compare -Wno-stringop-overflow -Wno-discarded-qualifiers -Wno-error=maybe-uninitialized -Wno-error=unused-function -Wno-error=unused-label -Wno-pedantic -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_POSIX_C_SOURCE=200809L -D_GNU_SOURCE -MD -MQ externals/cgns/hdf5/libsu2hdf5.a.p/H5.c.o -MF externals/cgns/hdf5/libsu2hdf5.a.p/H5.c.o.d -o externals/cgns/hdf5/libsu2hdf5.a.p/H5.c.o -c ../externals/cgns/hdf5/H5.c
  42. In file included from ../externals/cgns/hdf5/H5private.h:27,
  43. from ../externals/cgns/hdf5/H5.c:22:
  44. ../externals/cgns/hdf5/H5public.h:63:10: fatal error: mpi.h: No such file or directory
  45. 63 | #include <mpi.h>
  46. | ^~~~~~~
  47. compilation terminated.
  48. [6/801] Compiling C object externals/cgns/hdf5/libsu2hdf5.a.p/H5mpi.c.o
  49. FAILED: externals/cgns/hdf5/libsu2hdf5.a.p/H5mpi.c.o
  50. cc -Iexternals/cgns/hdf5/libsu2hdf5.a.p -Iexternals/cgns/hdf5 -I../externals/cgns/hdf5 -fdiagnostics-color=always -std=c99 -O3 -fPIC -Wno-unused-result -Wno-unused-parameter -Wno-unused-variable -Wno-unused-but-set-variable -Wno-sign-compare -Wno-stringop-overflow -Wno-discarded-qualifiers -Wno-error=maybe-uninitialized -Wno-error=unused-function -Wno-error=unused-label -Wno-pedantic -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D_POSIX_C_SOURCE=200809L -D_GNU_SOURCE -MD -MQ externals/cgns/hdf5/libsu2hdf5.a.p/H5mpi.c.o -MF externals/cgns/hdf5/libsu2hdf5.a.p/H5mpi.c.o.d -o externals/cgns/hdf5/libsu2hdf5.a.p/H5mpi.c.o -c ../externals/cgns/hdf5/H5mpi.c
  51. In file included from ../externals/cgns/hdf5/H5private.h:27,
  52. from ../externals/cgns/hdf5/H5mpi.c:19:
  53. ../externals/cgns/hdf5/H5public.h:63:10: fatal error: mpi.h: No such file or directory
  54. 63 | #include <mpi.h>
  55. | ^~~~~~~
  56. compilation terminated.
  57. ninja: build stopped: subcommand failed.
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