Not a member of Pastebin yet?
Sign Up,
it unlocks many cool features!
- print("N4 bias correction runs.")
- inputImage =sitk.ReadImage("C/Users/LENOVO/Desktop/Brats18_2013_1_1_t1.nii")
- maskImage = sitk.OtsuThreshold(inputImage,0,1,200)
- sitk.WriteImage(maskImage,"C/Users/LENOVO/Desktop/Brats18_2013_1_1_t1_Mask.nii")
- inputImage = sitk.Cast(inputImage,sitk.sitkFloat32)
- corrector = sitk.N4BiasFieldCorrectionImageFilter();
- output = corrector.Execute(inputImage,maskImage)
- sitk.WriteImage(output,"C/Users/LENOVO/Desktop/Brats18_2013_1_1_t1_Mask.nii")
- print("Finished N4 Bias Field Correction.....")
Add Comment
Please, Sign In to add comment