FROM rocker/r-ver:3.5.1

ENV PATH /usr/local/lib/R/bin/:$PATH
ENV R_HOME /usr/local/lib/R

WORKDIR /tmp

# Custom Setup
RUN mkdir /usr/share/doc/R${R_VERSION}

# Install dependencies for packages
RUN apt-get update \
    && apt-get install -y --no-install-recommends \
        python3 \
		python3-pip \
		libcurl4-openssl-dev \
		git \
        curl \
        default-jdk \
        ed \
        git \
        libbz2-dev \
        libcairo2-dev \
        libgdal-dev \
        libcgal-dev \
        libglu1-mesa-dev \
        libgsl0-dev \
        libproj-dev \
        libssl-dev \
        libx11-dev \
        libxt-dev \
        xfonts-base \
        unzip \
        x11proto-core-dev \
        python3-dev \
        libreadline-dev \
    && rm -rf /var/lib/apt/lists/*

RUN pip3 install setuptools
RUN pip3 install wheel
RUN pip3 install rpy2

COPY . /app

WORKDIR /app

CMD ["sleep", "3600"]