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- allsnps: YES
- ## qpAdm version: 1000
- seed: 1634926330
- read 1073741824 bytes
- read 2146675633 bytes
- packed geno read OK
- end of inpack
- left pops:
- Kazakhstan_Dali_EBA
- Botai
- Geoksyur_EN
- right pops:
- Cameroon_SMA.DG
- EEHG
- WSHG
- PPN
- WEHG
- Anatolia_N
- Iran_GanjDareh_N
- CHG
- ONG.SG
- Boisman_MN
- 0 Kazakhstan_Dali_EBA 1
- 1 Botai 2
- 2 Geoksyur_EN 21
- 3 Cameroon_SMA.DG 1
- 4 EEHG 5
- 5 WSHG 3
- 6 PPN 11
- 7 WEHG 33
- 8 Anatolia_N 22
- 9 Iran_GanjDareh_N 8
- 10 CHG 2
- 11 ONG.SG 6
- 12 Boisman_MN 12
- jackknife block size: 0.050
- snps: 1150509 indivs: 127
- number of blocks for block jackknife: 713
- ## ncols: 1150509
- coverage: Kazakhstan_Dali_EBA 774708
- coverage: Botai 926654
- coverage: Geoksyur_EN 1020133
- coverage: Cameroon_SMA.DG 1140138
- coverage: EEHG 1052093
- coverage: WSHG 858019
- coverage: PPN 847771
- coverage: WEHG 1140599
- coverage: Anatolia_N 1139031
- coverage: Iran_GanjDareh_N 1057358
- coverage: CHG 1149558
- coverage: ONG.SG 1143397
- coverage: Boisman_MN 1031750
- dof (jackknife): 622.004
- numsnps used: 1150509
- codimension 1
- f4info:
- f4rank: 1 dof: 8 chisq: 14.016 tail: 0.0813504333 dofdiff: 10 chisqdiff: -14.016 taildiff: 1
- B:
- scale 1.000
- EEHG 1.491
- WSHG 2.057
- PPN -0.287
- WEHG 0.714
- Anatolia_N -0.211
- Iran_GanjDareh_N -0.695
- CHG -0.347
- ONG.SG 0.542
- Boisman_MN 1.005
- A:
- scale 270.057
- Botai 0.332
- Geoksyur_EN -1.375
- full rank
- f4info:
- f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 8 chisqdiff: 14.016 taildiff: 0.0813504333
- B:
- scale 826.610 187.140
- EEHG 0.967 -1.522
- WSHG 1.731 -2.036
- PPN -0.845 0.166
- WEHG 0.031 -0.811
- Anatolia_N -0.937 0.069
- Iran_GanjDareh_N -1.174 0.569
- CHG -1.362 0.146
- ONG.SG 0.010 -0.621
- Boisman_MN 0.490 -1.059
- A:
- scale 1.414 1.414
- Botai 1.414 0.000
- Geoksyur_EN 0.000 1.414
- best coefficients: 0.805 0.195
- Jackknife mean: 0.805297131 0.194702869
- std. errors: 0.018 0.018
- error covariance (* 1,000,000)
- 332 -332
- -332 332
- summ: Kazakhstan_Dali_EBA 2 0.081350 0.805 0.195 332 -332 332
- fixed pat wt dof chisq tail prob
- 00 0 8 14.016 0.0813504 0.805 0.195
- 01 1 9 118.337 2.92504e-21 1.000 0.000
- 10 1 9 1589.164 0 0.000 1.000
- best pat: 00 0.0813504 - -
- best pat: 01 2.92504e-21 chi(nested): 104.321 p-value for nested model: 1.72054e-24
- coeffs: 0.805 0.195
- ## dscore:: f_4(Base, Fit, Rbase, right2)
- ## genstat:: f_4(Base, Fit, right1, right2)
- details: Botai EEHG 0.001170 2.953190
- details: Geoksyur_EN EEHG -0.008130 -20.941295
- dscore: EEHG f4: -0.000640 Z: -1.712157
- details: Botai WSHG 0.002094 4.613678
- details: Geoksyur_EN WSHG -0.010877 -24.432346
- dscore: WSHG f4: -0.000430 Z: -0.999510
- details: Botai PPN -0.001023 -2.843170
- details: Geoksyur_EN PPN 0.000885 2.573474
- dscore: PPN f4: -0.000651 Z: -1.930678
- details: Botai WEHG 0.000037 0.105657
- details: Geoksyur_EN WEHG -0.004332 -12.587084
- dscore: WEHG f4: -0.000813 Z: -2.453163
- details: Botai Anatolia_N -0.001133 -3.532337
- details: Geoksyur_EN Anatolia_N 0.000368 1.197483
- dscore: Anatolia_N f4: -0.000841 Z: -2.800848
- details: Botai Iran_GanjDareh_N -0.001420 -4.230071
- details: Geoksyur_EN Iran_GanjDareh_N 0.003039 9.174761
- dscore: Iran_GanjDareh_N f4: -0.000552 Z: -1.746985
- details: Botai CHG -0.001648 -4.482926
- details: Geoksyur_EN CHG 0.000780 2.138486
- dscore: CHG f4: -0.001175 Z: -3.389869
- details: Botai ONG.SG 0.000012 0.034036
- details: Geoksyur_EN ONG.SG -0.003317 -9.559070
- dscore: ONG.SG f4: -0.000636 Z: -1.982285
- details: Botai Boisman_MN 0.000593 1.678934
- details: Geoksyur_EN Boisman_MN -0.005661 -15.795635
- dscore: Boisman_MN f4: -0.000624 Z: -1.870965
- gendstat: Cameroon_SMA.DG EEHG -1.712
- gendstat: Cameroon_SMA.DG WSHG -1.000
- gendstat: Cameroon_SMA.DG PPN -1.931
- gendstat: Cameroon_SMA.DG WEHG -2.453
- gendstat: Cameroon_SMA.DG Anatolia_N -2.801
- gendstat: Cameroon_SMA.DG Iran_GanjDareh_N -1.747
- gendstat: Cameroon_SMA.DG CHG -3.390
- gendstat: Cameroon_SMA.DG ONG.SG -1.982
- gendstat: Cameroon_SMA.DG Boisman_MN -1.871
- gendstat: EEHG WSHG 0.580
- gendstat: EEHG PPN -0.030
- gendstat: EEHG WEHG -0.589
- gendstat: EEHG Anatolia_N -0.625
- gendstat: EEHG Iran_GanjDareh_N 0.258
- gendstat: EEHG CHG -1.375
- gendstat: EEHG ONG.SG 0.010
- gendstat: EEHG Boisman_MN 0.042
- gendstat: WSHG PPN -0.492
- gendstat: WSHG WEHG -0.981
- gendstat: WSHG Anatolia_N -1.021
- gendstat: WSHG Iran_GanjDareh_N -0.299
- gendstat: WSHG CHG -1.680
- gendstat: WSHG ONG.SG -0.484
- gendstat: WSHG Boisman_MN -0.465
- gendstat: PPN WEHG -0.560
- gendstat: PPN Anatolia_N -0.832
- gendstat: PPN Iran_GanjDareh_N 0.321
- gendstat: PPN CHG -1.610
- gendstat: PPN ONG.SG 0.045
- gendstat: PPN Boisman_MN 0.078
- gendstat: WEHG Anatolia_N -0.131
- gendstat: WEHG Iran_GanjDareh_N 0.903
- gendstat: WEHG CHG -1.111
- gendstat: WEHG ONG.SG 0.541
- gendstat: WEHG Boisman_MN 0.548
- gendstat: Anatolia_N Iran_GanjDareh_N 1.153
- gendstat: Anatolia_N CHG -1.184
- gendstat: Anatolia_N ONG.SG 0.694
- gendstat: Anatolia_N Boisman_MN 0.699
- gendstat: Iran_GanjDareh_N CHG -2.019
- gendstat: Iran_GanjDareh_N ONG.SG -0.275
- gendstat: Iran_GanjDareh_N Boisman_MN -0.221
- gendstat: CHG ONG.SG 1.496
- gendstat: CHG Boisman_MN 1.491
- gendstat: ONG.SG Boisman_MN 0.042
- ##end of qpAdm: 386.738 seconds cpu 1202.209 Mbytes in use
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