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  1. C:\Users\hadis\OneDrive\Algorithme python and java\Java\a8>java betterDNACompare < "HbB_FASTAs-in (1).txt"
  2. >Human 2144721 HBHU 4HHB
  3. >Gorilla 232230
  4. >Spider-Monkey 122567
  5. >Horse 230633 2MHB
  6. >Deer 229975 1HDS
  7. >Pig 809283 2PGH
  8. >Cow 576143 1HDA
  9. >Gull 122618
  10. >Trout 1942655 1OUT
  11. >Rockcod 1065040 1HBH
  12. >Lamprey 230607 2LHB
  13. >Gull 122618 >Gull 122618
  14. 1.0000000000000002
  15. >Gull 122618 >Pig 809283 2PGH
  16. 0.3759151294787383
  17. >Gull 122618 >Deer 229975 1HDS
  18. 0.24262425490409542
  19. >Gull 122618 >Spider-Monkey 122567
  20. 0.36842105263157904
  21. >Gull 122618 >Cow 576143 1HDA
  22. 0.3010454394369731
  23. >Gull 122618 >Lamprey 230607 2LHB
  24. 0.04590188606293697
  25. >Gull 122618 >Horse 230633 2MHB
  26. 0.37500000000000006
  27. >Gull 122618 >Gorilla 232230
  28. 0.3300348007041761
  29. >Gull 122618 >Sea-Cucumber 576151 1HLB
  30. 0.05665870858116139
  31. >Gull 122618 >Rockcod 1065040 1HBH
  32. 0.1533469647805162
  33. >Gull 122618 >Trout 1942655 1OUT
  34. 0.22079784172310574
  35. >Gull 122618 >Human 2144721 HBHU 4HHB
  36. 0.35410026391408517
  37. >Pig 809283 2PGH >Gull 122618
  38. 0.3759151294787383
  39. >Pig 809283 2PGH >Pig 809283 2PGH
  40. 1.0
  41. >Pig 809283 2PGH >Deer 229975 1HDS
  42. 0.4014478229518501
  43. >Pig 809283 2PGH >Spider-Monkey 122567
  44. 0.6511387064185289
  45. >Pig 809283 2PGH >Cow 576143 1HDA
  46. 0.5870341357257814
  47. >Pig 809283 2PGH >Lamprey 230607 2LHB
  48. 0.04014478229518501
  49. >Pig 809283 2PGH >Horse 230633 2MHB
  50. 0.5974365450644233
  51. >Pig 809283 2PGH >Gorilla 232230
  52. 0.6532912369389872
  53. >Pig 809283 2PGH >Sea-Cucumber 576151 1HLB
  54. 0.05781120709647461
  55. >Pig 809283 2PGH >Rockcod 1065040 1HBH
  56. 0.11564893447805269
  57. >Pig 809283 2PGH >Trout 1942655 1OUT
  58. 0.1921583543791679
  59. >Pig 809283 2PGH >Human 2144721 HBHU 4HHB
  60. 0.6757705019689477
  61. >Deer 229975 1HDS >Gull 122618
  62. 0.24262425490409542
  63. >Deer 229975 1HDS >Pig 809283 2PGH
  64. 0.4014478229518501
  65. >Deer 229975 1HDS >Deer 229975 1HDS
  66. 1.0000000000000002
  67. >Deer 229975 1HDS >Spider-Monkey 122567
  68. 0.44590403603995915
  69. >Deer 229975 1HDS >Cow 576143 1HDA
  70. 0.5001000300100036
  71. >Deer 229975 1HDS >Lamprey 230607 2LHB
  72. 0.026143790849673207
  73. >Deer 229975 1HDS >Horse 230633 2MHB
  74. 0.43278921145054855
  75. >Deer 229975 1HDS >Gorilla 232230
  76. 0.3881662952409873
  77. >Deer 229975 1HDS >Sea-Cucumber 576151 1HLB
  78. 0.018824415287446387
  79. >Deer 229975 1HDS >Rockcod 1065040 1HBH
  80. 0.11297239823409418
  81. >Deer 229975 1HDS >Trout 1942655 1OUT
  82. 0.1682927214324671
  83. >Deer 229975 1HDS >Human 2144721 HBHU 4HHB
  84. 0.41176470588235303
  85. >Spider-Monkey 122567 >Gull 122618
  86. 0.36842105263157904
  87. >Spider-Monkey 122567 >Pig 809283 2PGH
  88. 0.6511387064185289
  89. >Spider-Monkey 122567 >Deer 229975 1HDS
  90. 0.44590403603995915
  91. >Spider-Monkey 122567 >Spider-Monkey 122567
  92. 1.0000000000000002
  93. >Spider-Monkey 122567 >Cow 576143 1HDA
  94. 0.642230270798876
  95. >Spider-Monkey 122567 >Lamprey 230607 2LHB
  96. 0.05245929835764225
  97. >Spider-Monkey 122567 >Horse 230633 2MHB
  98. 0.6578947368421054
  99. >Spider-Monkey 122567 >Gorilla 232230
  100. 0.871291873859025
  101. >Spider-Monkey 122567 >Sea-Cucumber 576151 1HLB
  102. 0.03777247238744093
  103. >Spider-Monkey 122567 >Rockcod 1065040 1HBH
  104. 0.106676149412533
  105. >Spider-Monkey 122567 >Trout 1942655 1OUT
  106. 0.162351354208166
  107. >Spider-Monkey 122567 >Human 2144721 HBHU 4HHB
  108. 0.8918080720799183
  109. >Cow 576143 1HDA >Gull 122618
  110. 0.3010454394369731
  111. >Cow 576143 1HDA >Pig 809283 2PGH
  112. 0.5870341357257814
  113. >Cow 576143 1HDA >Deer 229975 1HDS
  114. 0.5001000300100036
  115. >Cow 576143 1HDA >Spider-Monkey 122567
  116. 0.642230270798876
  117. >Cow 576143 1HDA >Cow 576143 1HDA
  118. 1.0
  119. >Cow 576143 1HDA >Lamprey 230607 2LHB
  120. 0.04667600280093367
  121. >Cow 576143 1HDA >Horse 230633 2MHB
  122. 0.6087807775281011
  123. >Cow 576143 1HDA >Gorilla 232230
  124. 0.6309293237012046
  125. >Cow 576143 1HDA >Sea-Cucumber 576151 1HLB
  126. 0.04481107149482208
  127. >Cow 576143 1HDA >Rockcod 1065040 1HBH
  128. 0.14915339933253557
  129. >Cow 576143 1HDA >Trout 1942655 1OUT
  130. 0.15848577035006545
  131. >Cow 576143 1HDA >Human 2144721 HBHU 4HHB
  132. 0.613456036812271
  133. >Lamprey 230607 2LHB >Gull 122618
  134. 0.04590188606293697
  135. >Lamprey 230607 2LHB >Pig 809283 2PGH
  136. 0.04014478229518501
  137. >Lamprey 230607 2LHB >Deer 229975 1HDS
  138. 0.026143790849673207
  139. >Lamprey 230607 2LHB >Spider-Monkey 122567
  140. 0.05245929835764225
  141. >Lamprey 230607 2LHB >Cow 576143 1HDA
  142. 0.04667600280093367
  143. >Lamprey 230607 2LHB >Lamprey 230607 2LHB
  144. 1.0000000000000002
  145. >Lamprey 230607 2LHB >Horse 230633 2MHB
  146. 0.04590188606293697
  147. >Lamprey 230607 2LHB >Gorilla 232230
  148. 0.046053628248930695
  149. >Lamprey 230607 2LHB >Sea-Cucumber 576151 1HLB
  150. 0.043923635670708235
  151. >Lamprey 230607 2LHB >Rockcod 1065040 1HBH
  152. 0.04651804633168584
  153. >Lamprey 230607 2LHB >Trout 1942655 1OUT
  154. 0.06472796978171812
  155. >Lamprey 230607 2LHB >Human 2144721 HBHU 4HHB
  156. 0.045751633986928116
  157. >Horse 230633 2MHB >Gull 122618
  158. 0.37500000000000006
  159. >Horse 230633 2MHB >Pig 809283 2PGH
  160. 0.5974365450644233
  161. >Horse 230633 2MHB >Deer 229975 1HDS
  162. 0.43278921145054855
  163. >Horse 230633 2MHB >Spider-Monkey 122567
  164. 0.6578947368421054
  165. >Horse 230633 2MHB >Cow 576143 1HDA
  166. 0.6087807775281011
  167. >Horse 230633 2MHB >Lamprey 230607 2LHB
  168. 0.04590188606293697
  169. >Horse 230633 2MHB >Horse 230633 2MHB
  170. 1.0000000000000002
  171. >Horse 230633 2MHB >Gorilla 232230
  172. 0.6138647293097675
  173. >Horse 230633 2MHB >Sea-Cucumber 576151 1HLB
  174. 0.050363296516587906
  175. >Horse 230633 2MHB >Rockcod 1065040 1HBH
  176. 0.14001244610394958
  177. >Horse 230633 2MHB >Trout 1942655 1OUT
  178. 0.1948216250497992
  179. >Horse 230633 2MHB >Human 2144721 HBHU 4HHB
  180. 0.6360689925864123
  181. >Gorilla 232230 >Gull 122618
  182. 0.3300348007041761
  183. >Gorilla 232230 >Pig 809283 2PGH
  184. 0.6532912369389872
  185. >Gorilla 232230 >Deer 229975 1HDS
  186. 0.3881662952409873
  187. >Gorilla 232230 >Spider-Monkey 122567
  188. 0.871291873859025
  189. >Gorilla 232230 >Cow 576143 1HDA
  190. 0.6309293237012046
  191. >Gorilla 232230 >Lamprey 230607 2LHB
  192. 0.046053628248930695
  193. >Gorilla 232230 >Horse 230633 2MHB
  194. 0.6138647293097675
  195. >Gorilla 232230 >Gorilla 232230
  196. 1.0
  197. >Gorilla 232230 >Sea-Cucumber 576151 1HLB
  198. 0.04421356380622872
  199. >Gorilla 232230 >Rockcod 1065040 1HBH
  200. 0.12709669857762781
  201. >Gorilla 232230 >Trout 1942655 1OUT
  202. 0.19546566523636955
  203. >Gorilla 232230 >Human 2144721 HBHU 4HHB
  204. 0.9802843727272391
  205. >Sea-Cucumber 576151 1HLB >Gull 122618
  206. 0.05665870858116139
  207. >Sea-Cucumber 576151 1HLB >Pig 809283 2PGH
  208. 0.05781120709647461
  209. >Sea-Cucumber 576151 1HLB >Deer 229975 1HDS
  210. 0.018824415287446387
  211. >Sea-Cucumber 576151 1HLB >Spider-Monkey 122567
  212. 0.03777247238744093
  213. >Sea-Cucumber 576151 1HLB >Cow 576143 1HDA
  214. 0.04481107149482208
  215. >Sea-Cucumber 576151 1HLB >Lamprey 230607 2LHB
  216. 0.043923635670708235
  217. >Sea-Cucumber 576151 1HLB >Horse 230633 2MHB
  218. 0.050363296516587906
  219. >Sea-Cucumber 576151 1HLB >Gorilla 232230
  220. 0.04421356380622872
  221. >Sea-Cucumber 576151 1HLB >Sea-Cucumber 576151 1HLB
  222. 0.9999999999999998
  223. >Sea-Cucumber 576151 1HLB >Rockcod 1065040 1HBH
  224. 0.019139754063396273
  225. >Sea-Cucumber 576151 1HLB >Trout 1942655 1OUT
  226. 0.018642532613430435
  227. >Sea-Cucumber 576151 1HLB >Human 2144721 HBHU 4HHB
  228. 0.043923635670708235
  229. >Rockcod 1065040 1HBH >Gull 122618
  230. 0.1533469647805162
  231. >Rockcod 1065040 1HBH >Pig 809283 2PGH
  232. 0.11564893447805269
  233. >Rockcod 1065040 1HBH >Deer 229975 1HDS
  234. 0.11297239823409418
  235. >Rockcod 1065040 1HBH >Spider-Monkey 122567
  236. 0.106676149412533
  237. >Rockcod 1065040 1HBH >Cow 576143 1HDA
  238. 0.14915339933253557
  239. >Rockcod 1065040 1HBH >Lamprey 230607 2LHB
  240. 0.04651804633168584
  241. >Rockcod 1065040 1HBH >Horse 230633 2MHB
  242. 0.14001244610394958
  243. >Rockcod 1065040 1HBH >Gorilla 232230
  244. 0.12709669857762781
  245. >Rockcod 1065040 1HBH >Sea-Cucumber 576151 1HLB
  246. 0.019139754063396273
  247. >Rockcod 1065040 1HBH >Rockcod 1065040 1HBH
  248. 1.0000000000000002
  249. >Rockcod 1065040 1HBH >Trout 1942655 1OUT
  250. 0.19085557085358795
  251. >Rockcod 1065040 1HBH >Human 2144721 HBHU 4HHB
  252. 0.10632696304385335
  253. >Trout 1942655 1OUT >Gull 122618
  254. 0.22079784172310574
  255. >Trout 1942655 1OUT >Pig 809283 2PGH
  256. 0.1921583543791679
  257. >Trout 1942655 1OUT >Deer 229975 1HDS
  258. 0.1682927214324671
  259. >Trout 1942655 1OUT >Spider-Monkey 122567
  260. 0.162351354208166
  261. >Trout 1942655 1OUT >Cow 576143 1HDA
  262. 0.15848577035006545
  263. >Trout 1942655 1OUT >Lamprey 230607 2LHB
  264. 0.06472796978171812
  265. >Trout 1942655 1OUT >Horse 230633 2MHB
  266. 0.1948216250497992
  267. >Trout 1942655 1OUT >Gorilla 232230
  268. 0.19546566523636955
  269. >Trout 1942655 1OUT >Sea-Cucumber 576151 1HLB
  270. 0.018642532613430435
  271. >Trout 1942655 1OUT >Rockcod 1065040 1HBH
  272. 0.19085557085358795
  273. >Trout 1942655 1OUT >Trout 1942655 1OUT
  274. 1.0
  275. >Trout 1942655 1OUT >Human 2144721 HBHU 4HHB
  276. 0.20065670632332616
  277. >Human 2144721 HBHU 4HHB >Gull 122618
  278. 0.35410026391408517
  279. >Human 2144721 HBHU 4HHB >Pig 809283 2PGH
  280. 0.6757705019689477
  281. >Human 2144721 HBHU 4HHB >Deer 229975 1HDS
  282. 0.41176470588235303
  283. >Human 2144721 HBHU 4HHB >Spider-Monkey 122567
  284. 0.8918080720799183
  285. >Human 2144721 HBHU 4HHB >Cow 576143 1HDA
  286. 0.613456036812271
  287. >Human 2144721 HBHU 4HHB >Lamprey 230607 2LHB
  288. 0.045751633986928116
  289. >Human 2144721 HBHU 4HHB >Horse 230633 2MHB
  290. 0.6360689925864123
  291. >Human 2144721 HBHU 4HHB >Gorilla 232230
  292. 0.9802843727272391
  293. >Human 2144721 HBHU 4HHB >Sea-Cucumber 576151 1HLB
  294. 0.043923635670708235
  295. >Human 2144721 HBHU 4HHB >Rockcod 1065040 1HBH
  296. 0.10632696304385335
  297. >Human 2144721 HBHU 4HHB >Trout 1942655 1OUT
  298. 0.20065670632332616
  299. >Human 2144721 HBHU 4HHB >Human 2144721 HBHU 4HHB
  300. 1.0000000000000002
  301.  
  302. C:\Users\hadis\OneDrive\Algorithme python and java\Java\a8>
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