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  1. qpAdm: parameter file: parqpadm.txt
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: fstatsa.txt
  5. popleft: left.txt
  6. popright: right.txt
  7. details: YES
  8. ## qpAdm version: 1520
  9. seed: 1842749130
  10. *** recommended that inbreed be explicitly set ***
  11. inbreed set NO
  12.  
  13. left pops:
  14. ponticgreek1
  15. Iberia_Emporion
  16. Armenia_LBA.SG
  17.  
  18. right pops:
  19. Mbuti.DG
  20. Russia_Ust_Ishim.DG
  21. China_Tianyuan
  22. Goyet_Neanderthal.SG
  23. Iran_GanjDareh_N
  24. Georgia_Kotias.SG
  25. Russia_MA1_HG.SG
  26. Georgia_Satsurblia.SG
  27. Papuan.DG
  28. Israel_Natufian_published
  29. Russia_DevilsCave_N.SG
  30. ONG.SG
  31. Greece_Minoan_Lassithi
  32. Russia_MLBA_Sintashta_published
  33. Turkey_N
  34.  
  35. codimension 1
  36. f4info:
  37. f4rank: 1 dof: 13 chisq: 20.503 tail: 0.0833637953 dofdiff: 15 chisqdiff: -20.503 taildiff: 1
  38. B:
  39. scale 1.000
  40. Russia_Ust_Ishim.DG 0.117
  41. China_Tianyuan 0.243
  42. Goyet_Neanderthal.SG 0.222
  43. Iran_GanjDareh_N -0.400
  44. Georgia_Kotias.SG -0.402
  45. Russia_MA1_HG.SG -0.448
  46. Georgia_Satsurblia.SG -1.012
  47. Papuan.DG 0.080
  48. Israel_Natufian_published 1.466
  49. Russia_DevilsCave_N.SG 0.188
  50. ONG.SG 0.283
  51. Greece_Minoan_Lassithi 2.069
  52. Russia_MLBA_Sintashta_published 1.050
  53. Turkey_N 2.163
  54. A:
  55. scale 982.158
  56. Iberia_Emporion 1.095
  57. Armenia_LBA.SG -0.895
  58.  
  59.  
  60. full rank
  61. f4info:
  62. f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 13 chisqdiff: 20.503 taildiff: 0.0833637953
  63. B:
  64. scale 679.342 1034.245
  65. Russia_Ust_Ishim.DG 0.652 0.734
  66. China_Tianyuan 0.517 0.194
  67. Goyet_Neanderthal.SG 0.477 0.415
  68. Iran_GanjDareh_N -0.718 -0.258
  69. Georgia_Kotias.SG -0.826 -0.376
  70. Russia_MA1_HG.SG 0.341 1.305
  71. Georgia_Satsurblia.SG -1.769 -0.582
  72. Papuan.DG -0.017 -0.157
  73. Israel_Natufian_published 1.277 -1.243
  74. Russia_DevilsCave_N.SG 0.422 0.299
  75. ONG.SG 0.176 -0.393
  76. Greece_Minoan_Lassithi 1.629 -1.860
  77. Russia_MLBA_Sintashta_published 1.477 0.061
  78. Turkey_N 1.401 -2.393
  79. A:
  80. scale 1.414 1.414
  81. Iberia_Emporion 1.414 0.000
  82. Armenia_LBA.SG 0.000 1.414
  83.  
  84.  
  85. best coefficients: 0.450 0.550
  86. totmean: 0.450 0.550
  87. boot mean: 0.450 0.550
  88. std. errors: 0.061 0.061
  89.  
  90. error covariance (* 1,000,000)
  91. 3736 -3736
  92. -3736 3736
  93.  
  94.  
  95. summ: ponticgreek1 2 0.083364 0.450 0.550 3736 -3736 3736
  96.  
  97. fixed pat wt dof chisq tail prob
  98. 00 0 13 20.503 0.0833638 0.450 0.550
  99. 01 1 14 88.680 6.73438e-13 1.000 0.000
  100. 10 1 14 72.893 5.74973e-10 0.000 1.000
  101. best pat: 00 0.0833638 - -
  102. best pat: 10 5.74973e-10 chi(nested): 52.390 p-value for nested model: 4.55038e-13
  103.  
  104. coeffs: 0.450 0.550
  105.  
  106. ## dscore:: f_4(Base, Fit, Rbase, right2)
  107. ## genstat:: f_4(Base, Fit, right1, right2)
  108.  
  109. details: Iberia_Emporion Russia_Ust_Ishim.DG 0.000959 1.526023
  110. details: Armenia_LBA.SG Russia_Ust_Ishim.DG 0.000709 1.209377
  111. dscore: Russia_Ust_Ishim.DG f4: 0.000822 Z: 1.458344
  112.  
  113. details: Iberia_Emporion China_Tianyuan 0.000762 1.021433
  114. details: Armenia_LBA.SG China_Tianyuan 0.000188 0.270208
  115. dscore: China_Tianyuan f4: 0.000446 Z: 0.662814
  116.  
  117. details: Iberia_Emporion Goyet_Neanderthal.SG 0.000701 1.359838
  118. details: Armenia_LBA.SG Goyet_Neanderthal.SG 0.000402 0.703809
  119. dscore: Goyet_Neanderthal.SG f4: 0.000537 Z: 1.059254
  120.  
  121. details: Iberia_Emporion Iran_GanjDareh_N -0.001057 -2.051495
  122. details: Armenia_LBA.SG Iran_GanjDareh_N -0.000250 -0.481564
  123. dscore: Iran_GanjDareh_N f4: -0.000613 Z: -1.270674
  124.  
  125. details: Iberia_Emporion Georgia_Kotias.SG -0.001216 -1.784432
  126. details: Armenia_LBA.SG Georgia_Kotias.SG -0.000364 -0.537518
  127. dscore: Georgia_Kotias.SG f4: -0.000747 Z: -1.188766
  128.  
  129. details: Iberia_Emporion Russia_MA1_HG.SG 0.000502 0.667481
  130. details: Armenia_LBA.SG Russia_MA1_HG.SG 0.001262 1.643593
  131. dscore: Russia_MA1_HG.SG f4: 0.000920 Z: 1.300355
  132.  
  133. details: Iberia_Emporion Georgia_Satsurblia.SG -0.002604 -3.495773
  134. details: Armenia_LBA.SG Georgia_Satsurblia.SG -0.000563 -0.717873
  135. dscore: Georgia_Satsurblia.SG f4: -0.001481 Z: -2.069639
  136.  
  137. details: Iberia_Emporion Papuan.DG -0.000025 -0.049644
  138. details: Armenia_LBA.SG Papuan.DG -0.000152 -0.297093
  139. dscore: Papuan.DG f4: -0.000095 Z: -0.200173
  140.  
  141. details: Iberia_Emporion Israel_Natufian_published 0.001880 1.730869
  142. details: Armenia_LBA.SG Israel_Natufian_published -0.001202 -1.062736
  143. dscore: Israel_Natufian_published f4: 0.000185 Z: 0.175982
  144.  
  145. details: Iberia_Emporion Russia_DevilsCave_N.SG 0.000621 1.048892
  146. details: Armenia_LBA.SG Russia_DevilsCave_N.SG 0.000289 0.509172
  147. dscore: Russia_DevilsCave_N.SG f4: 0.000438 Z: 0.818007
  148.  
  149. details: Iberia_Emporion ONG.SG 0.000260 0.488562
  150. details: Armenia_LBA.SG ONG.SG -0.000380 -0.756756
  151. dscore: ONG.SG f4: -0.000092 Z: -0.191762
  152.  
  153. details: Iberia_Emporion Greece_Minoan_Lassithi 0.002398 4.336514
  154. details: Armenia_LBA.SG Greece_Minoan_Lassithi -0.001798 -3.300822
  155. dscore: Greece_Minoan_Lassithi f4: 0.000090 Z: 0.174207
  156.  
  157. details: Iberia_Emporion Russia_MLBA_Sintashta_published 0.002174 2.182361
  158. details: Armenia_LBA.SG Russia_MLBA_Sintashta_published 0.000059 0.058730
  159. dscore: Russia_MLBA_Sintashta_published f4: 0.001010 Z: 1.084720
  160.  
  161. details: Iberia_Emporion Turkey_N 0.002062 4.386626
  162. details: Armenia_LBA.SG Turkey_N -0.002314 -5.348952
  163. dscore: Turkey_N f4: -0.000345 Z: -0.821642
  164.  
  165. gendstat: Mbuti.DG Russia_Ust_Ishim.DG 1.458
  166. gendstat: Mbuti.DG China_Tianyuan 0.663
  167. gendstat: Mbuti.DG Goyet_Neanderthal.SG 1.059
  168. gendstat: Mbuti.DG Iran_GanjDareh_N -1.271
  169. gendstat: Mbuti.DG Georgia_Kotias.SG -1.189
  170. gendstat: Mbuti.DG Russia_MA1_HG.SG 1.300
  171. gendstat: Mbuti.DG Georgia_Satsurblia.SG -2.070
  172. gendstat: Mbuti.DG Papuan.DG -0.200
  173. gendstat: Mbuti.DG Israel_Natufian_published 0.176
  174. gendstat: Mbuti.DG Russia_DevilsCave_N.SG 0.818
  175. gendstat: Mbuti.DG ONG.SG -0.192
  176. gendstat: Mbuti.DG Greece_Minoan_Lassithi 0.174
  177. gendstat: Mbuti.DG Russia_MLBA_Sintashta_published 1.085
  178. gendstat: Mbuti.DG Turkey_N -0.822
  179. gendstat: Russia_Ust_Ishim.DG China_Tianyuan -0.528
  180. gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG -0.389
  181. gendstat: Russia_Ust_Ishim.DG Iran_GanjDareh_N -2.397
  182. gendstat: Russia_Ust_Ishim.DG Georgia_Kotias.SG -2.137
  183. gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG 0.127
  184. gendstat: Russia_Ust_Ishim.DG Georgia_Satsurblia.SG -2.926
  185. gendstat: Russia_Ust_Ishim.DG Papuan.DG -1.484
  186. gendstat: Russia_Ust_Ishim.DG Israel_Natufian_published -0.586
  187. gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG -0.597
  188. gendstat: Russia_Ust_Ishim.DG ONG.SG -1.572
  189. gendstat: Russia_Ust_Ishim.DG Greece_Minoan_Lassithi -1.151
  190. gendstat: Russia_Ust_Ishim.DG Russia_MLBA_Sintashta_published 0.191
  191. gendstat: Russia_Ust_Ishim.DG Turkey_N -2.107
  192. gendstat: China_Tianyuan Goyet_Neanderthal.SG 0.114
  193. gendstat: China_Tianyuan Iran_GanjDareh_N -1.579
  194. gendstat: China_Tianyuan Georgia_Kotias.SG -1.525
  195. gendstat: China_Tianyuan Russia_MA1_HG.SG 0.608
  196. gendstat: China_Tianyuan Georgia_Satsurblia.SG -2.252
  197. gendstat: China_Tianyuan Papuan.DG -0.852
  198. gendstat: China_Tianyuan Israel_Natufian_published -0.231
  199. gendstat: China_Tianyuan Russia_DevilsCave_N.SG -0.012
  200. gendstat: China_Tianyuan ONG.SG -0.889
  201. gendstat: China_Tianyuan Greece_Minoan_Lassithi -0.528
  202. gendstat: China_Tianyuan Russia_MLBA_Sintashta_published 0.559
  203. gendstat: China_Tianyuan Turkey_N -1.307
  204. gendstat: Goyet_Neanderthal.SG Iran_GanjDareh_N -1.759
  205. gendstat: Goyet_Neanderthal.SG Georgia_Kotias.SG -1.714
  206. gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG 0.474
  207. gendstat: Goyet_Neanderthal.SG Georgia_Satsurblia.SG -2.428
  208. gendstat: Goyet_Neanderthal.SG Papuan.DG -0.948
  209. gendstat: Goyet_Neanderthal.SG Israel_Natufian_published -0.307
  210. gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG -0.144
  211. gendstat: Goyet_Neanderthal.SG ONG.SG -0.970
  212. gendstat: Goyet_Neanderthal.SG Greece_Minoan_Lassithi -0.658
  213. gendstat: Goyet_Neanderthal.SG Russia_MLBA_Sintashta_published 0.475
  214. gendstat: Goyet_Neanderthal.SG Turkey_N -1.478
  215. gendstat: Iran_GanjDareh_N Georgia_Kotias.SG -0.227
  216. gendstat: Iran_GanjDareh_N Russia_MA1_HG.SG 2.273
  217. gendstat: Iran_GanjDareh_N Georgia_Satsurblia.SG -1.250
  218. gendstat: Iran_GanjDareh_N Papuan.DG 0.998
  219. gendstat: Iran_GanjDareh_N Israel_Natufian_published 0.754
  220. gendstat: Iran_GanjDareh_N Russia_DevilsCave_N.SG 1.921
  221. gendstat: Iran_GanjDareh_N ONG.SG 0.987
  222. gendstat: Iran_GanjDareh_N Greece_Minoan_Lassithi 1.409
  223. gendstat: Iran_GanjDareh_N Russia_MLBA_Sintashta_published 1.728
  224. gendstat: Iran_GanjDareh_N Turkey_N 0.634
  225. gendstat: Georgia_Kotias.SG Russia_MA1_HG.SG 2.085
  226. gendstat: Georgia_Kotias.SG Georgia_Satsurblia.SG -0.975
  227. gendstat: Georgia_Kotias.SG Papuan.DG 0.959
  228. gendstat: Georgia_Kotias.SG Israel_Natufian_published 0.823
  229. gendstat: Georgia_Kotias.SG Russia_DevilsCave_N.SG 1.778
  230. gendstat: Georgia_Kotias.SG ONG.SG 0.992
  231. gendstat: Georgia_Kotias.SG Greece_Minoan_Lassithi 1.329
  232. gendstat: Georgia_Kotias.SG Russia_MLBA_Sintashta_published 1.824
  233. gendstat: Georgia_Kotias.SG Turkey_N 0.720
  234. gendstat: Russia_MA1_HG.SG Georgia_Satsurblia.SG -2.751
  235. gendstat: Russia_MA1_HG.SG Papuan.DG -1.473
  236. gendstat: Russia_MA1_HG.SG Israel_Natufian_published -0.628
  237. gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG -0.684
  238. gendstat: Russia_MA1_HG.SG ONG.SG -1.497
  239. gendstat: Russia_MA1_HG.SG Greece_Minoan_Lassithi -1.181
  240. gendstat: Russia_MA1_HG.SG Russia_MLBA_Sintashta_published 0.088
  241. gendstat: Russia_MA1_HG.SG Turkey_N -1.948
  242. gendstat: Georgia_Satsurblia.SG Papuan.DG 1.921
  243. gendstat: Georgia_Satsurblia.SG Israel_Natufian_published 1.398
  244. gendstat: Georgia_Satsurblia.SG Russia_DevilsCave_N.SG 2.540
  245. gendstat: Georgia_Satsurblia.SG ONG.SG 1.987
  246. gendstat: Georgia_Satsurblia.SG Greece_Minoan_Lassithi 2.147
  247. gendstat: Georgia_Satsurblia.SG Russia_MLBA_Sintashta_published 2.337
  248. gendstat: Georgia_Satsurblia.SG Turkey_N 1.729
  249. gendstat: Papuan.DG Israel_Natufian_published 0.262
  250. gendstat: Papuan.DG Russia_DevilsCave_N.SG 1.038
  251. gendstat: Papuan.DG ONG.SG 0.006
  252. gendstat: Papuan.DG Greece_Minoan_Lassithi 0.339
  253. gendstat: Papuan.DG Russia_MLBA_Sintashta_published 1.133
  254. gendstat: Papuan.DG Turkey_N -0.539
  255. gendstat: Israel_Natufian_published Russia_DevilsCave_N.SG 0.238
  256. gendstat: Israel_Natufian_published ONG.SG -0.261
  257. gendstat: Israel_Natufian_published Greece_Minoan_Lassithi -0.089
  258. gendstat: Israel_Natufian_published Russia_MLBA_Sintashta_published 0.619
  259. gendstat: Israel_Natufian_published Turkey_N -0.519
  260. gendstat: Russia_DevilsCave_N.SG ONG.SG -1.091
  261. gendstat: Russia_DevilsCave_N.SG Greece_Minoan_Lassithi -0.621
  262. gendstat: Russia_DevilsCave_N.SG Russia_MLBA_Sintashta_published 0.582
  263. gendstat: Russia_DevilsCave_N.SG Turkey_N -1.606
  264. gendstat: ONG.SG Greece_Minoan_Lassithi 0.336
  265. gendstat: ONG.SG Russia_MLBA_Sintashta_published 1.137
  266. gendstat: ONG.SG Turkey_N -0.565
  267. gendstat: Greece_Minoan_Lassithi Russia_MLBA_Sintashta_published 1.031
  268. gendstat: Greece_Minoan_Lassithi Turkey_N -1.237
  269. gendstat: Russia_MLBA_Sintashta_published Turkey_N -1.607
  270.  
  271. ##end of qpAdm: 2.349 seconds cpu 0.823 Mbytes in use
  272.  
  273. --------------------------------------------------------------------------------------
  274.  
  275. qpAdm: parameter file: parqpadm.txt
  276. ### THE INPUT PARAMETERS
  277. ##PARAMETER NAME: VALUE
  278. fstatsname: fstatsa.txt
  279. popleft: left.txt
  280. popright: right.txt
  281. details: YES
  282. ## qpAdm version: 1520
  283. seed: 1814388450
  284. *** recommended that inbreed be explicitly set ***
  285. inbreed set NO
  286.  
  287. left pops:
  288. ponticgreek1
  289. Iberia_Emporion
  290. Iran_IA_HajjiFiruz
  291.  
  292. right pops:
  293. Mbuti.DG
  294. Russia_Ust_Ishim.DG
  295. China_Tianyuan
  296. Goyet_Neanderthal.SG
  297. Iran_GanjDareh_N
  298. Georgia_Kotias.SG
  299. Russia_MA1_HG.SG
  300. Georgia_Satsurblia.SG
  301. Papuan.DG
  302. Israel_Natufian_published
  303. Russia_DevilsCave_N.SG
  304. ONG.SG
  305. Greece_Minoan_Lassithi
  306. Russia_MLBA_Sintashta_published
  307. Turkey_N
  308.  
  309. codimension 1
  310. f4info:
  311. f4rank: 1 dof: 13 chisq: 16.718 tail: 0.212512394 dofdiff: 15 chisqdiff: -16.718 taildiff: 1
  312. B:
  313. scale 1.000
  314. Russia_Ust_Ishim.DG 0.456
  315. China_Tianyuan 0.151
  316. Goyet_Neanderthal.SG 0.527
  317. Iran_GanjDareh_N -1.316
  318. Georgia_Kotias.SG -0.423
  319. Russia_MA1_HG.SG -0.076
  320. Georgia_Satsurblia.SG -1.021
  321. Papuan.DG -0.269
  322. Israel_Natufian_published 1.141
  323. Russia_DevilsCave_N.SG 0.052
  324. ONG.SG -0.046
  325. Greece_Minoan_Lassithi 2.010
  326. Russia_MLBA_Sintashta_published 0.940
  327. Turkey_N 2.056
  328. A:
  329. scale 985.740
  330. Iberia_Emporion 1.015
  331. Iran_IA_HajjiFiruz -0.985
  332.  
  333.  
  334. full rank
  335. f4info:
  336. f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 13 chisqdiff: 16.718 taildiff: 0.212512394
  337. B:
  338. scale 679.342 1009.531
  339. Russia_Ust_Ishim.DG 0.652 0.109
  340. China_Tianyuan 0.517 0.606
  341. Goyet_Neanderthal.SG 0.477 -0.303
  342. Iran_GanjDareh_N -0.718 1.799
  343. Georgia_Kotias.SG -0.826 -0.443
  344. Russia_MA1_HG.SG 0.341 0.798
  345. Georgia_Satsurblia.SG -1.769 -0.698
  346. Papuan.DG -0.017 0.637
  347. Israel_Natufian_published 1.277 -0.653
  348. Russia_DevilsCave_N.SG 0.422 0.688
  349. ONG.SG 0.176 0.475
  350. Greece_Minoan_Lassithi 1.629 -1.636
  351. Russia_MLBA_Sintashta_published 1.477 0.610
  352. Turkey_N 1.401 -2.095
  353. A:
  354. scale 1.414 1.414
  355. Iberia_Emporion 1.414 0.000
  356. Iran_IA_HajjiFiruz 0.000 1.414
  357.  
  358.  
  359. best coefficients: 0.493 0.507
  360. totmean: 0.493 0.507
  361. boot mean: 0.491 0.509
  362. std. errors: 0.060 0.060
  363.  
  364. error covariance (* 1,000,000)
  365. 3548 -3548
  366. -3548 3548
  367.  
  368.  
  369. summ: ponticgreek1 2 0.212512 0.491 0.509 3548 -3548 3548
  370.  
  371. fixed pat wt dof chisq tail prob
  372. 00 0 13 16.718 0.212512 0.493 0.507
  373. 01 1 14 88.590 7.00326e-13 1.000 0.000
  374. 10 1 14 68.971 2.96316e-09 0.000 1.000
  375. best pat: 00 0.212512 - -
  376. best pat: 10 2.96316e-09 chi(nested): 52.252 p-value for nested model: 4.88053e-13
  377.  
  378. coeffs: 0.493 0.507
  379.  
  380. ## dscore:: f_4(Base, Fit, Rbase, right2)
  381. ## genstat:: f_4(Base, Fit, right1, right2)
  382.  
  383. details: Iberia_Emporion Russia_Ust_Ishim.DG 0.000959 1.526023
  384. details: Iran_IA_HajjiFiruz Russia_Ust_Ishim.DG 0.000108 0.153925
  385. dscore: Russia_Ust_Ishim.DG f4: 0.000527 Z: 0.871397
  386.  
  387. details: Iberia_Emporion China_Tianyuan 0.000762 1.021433
  388. details: Iran_IA_HajjiFiruz China_Tianyuan 0.000600 0.730607
  389. dscore: China_Tianyuan f4: 0.000680 Z: 0.948739
  390.  
  391. details: Iberia_Emporion Goyet_Neanderthal.SG 0.000701 1.359838
  392. details: Iran_IA_HajjiFiruz Goyet_Neanderthal.SG -0.000300 -0.491316
  393. dscore: Goyet_Neanderthal.SG f4: 0.000193 Z: 0.376224
  394.  
  395. details: Iberia_Emporion Iran_GanjDareh_N -0.001057 -2.051495
  396. details: Iran_IA_HajjiFiruz Iran_GanjDareh_N 0.001782 3.000339
  397. dscore: Iran_GanjDareh_N f4: 0.000384 Z: 0.760286
  398.  
  399. details: Iberia_Emporion Georgia_Kotias.SG -0.001216 -1.784432
  400. details: Iran_IA_HajjiFiruz Georgia_Kotias.SG -0.000439 -0.554033
  401. dscore: Georgia_Kotias.SG f4: -0.000822 Z: -1.235698
  402.  
  403. details: Iberia_Emporion Russia_MA1_HG.SG 0.000502 0.667481
  404. details: Iran_IA_HajjiFiruz Russia_MA1_HG.SG 0.000791 0.895990
  405. dscore: Russia_MA1_HG.SG f4: 0.000649 Z: 0.870273
  406.  
  407. details: Iberia_Emporion Georgia_Satsurblia.SG -0.002604 -3.495773
  408. details: Iran_IA_HajjiFiruz Georgia_Satsurblia.SG -0.000691 -0.825483
  409. dscore: Georgia_Satsurblia.SG f4: -0.001633 Z: -2.274334
  410.  
  411. details: Iberia_Emporion Papuan.DG -0.000025 -0.049644
  412. details: Iran_IA_HajjiFiruz Papuan.DG 0.000631 1.047803
  413. dscore: Papuan.DG f4: 0.000308 Z: 0.616416
  414.  
  415. details: Iberia_Emporion Israel_Natufian_published 0.001880 1.730869
  416. details: Iran_IA_HajjiFiruz Israel_Natufian_published -0.000647 -0.548800
  417. dscore: Israel_Natufian_published f4: 0.000598 Z: 0.570172
  418.  
  419. details: Iberia_Emporion Russia_DevilsCave_N.SG 0.000621 1.048892
  420. details: Iran_IA_HajjiFiruz Russia_DevilsCave_N.SG 0.000682 1.041531
  421. dscore: Russia_DevilsCave_N.SG f4: 0.000652 Z: 1.154288
  422.  
  423. details: Iberia_Emporion ONG.SG 0.000260 0.488562
  424. details: Iran_IA_HajjiFiruz ONG.SG 0.000470 0.793641
  425. dscore: ONG.SG f4: 0.000367 Z: 0.716659
  426.  
  427. details: Iberia_Emporion Greece_Minoan_Lassithi 0.002398 4.336514
  428. details: Iran_IA_HajjiFiruz Greece_Minoan_Lassithi -0.001621 -2.513597
  429. dscore: Greece_Minoan_Lassithi f4: 0.000359 Z: 0.652641
  430.  
  431. details: Iberia_Emporion Russia_MLBA_Sintashta_published 0.002174 2.182361
  432. details: Iran_IA_HajjiFiruz Russia_MLBA_Sintashta_published 0.000604 0.540422
  433. dscore: Russia_MLBA_Sintashta_published f4: 0.001377 Z: 1.410209
  434.  
  435. details: Iberia_Emporion Turkey_N 0.002062 4.386626
  436. details: Iran_IA_HajjiFiruz Turkey_N -0.002076 -3.807159
  437. dscore: Turkey_N f4: -0.000038 Z: -0.081880
  438.  
  439. gendstat: Mbuti.DG Russia_Ust_Ishim.DG 0.871
  440. gendstat: Mbuti.DG China_Tianyuan 0.949
  441. gendstat: Mbuti.DG Goyet_Neanderthal.SG 0.376
  442. gendstat: Mbuti.DG Iran_GanjDareh_N 0.760
  443. gendstat: Mbuti.DG Georgia_Kotias.SG -1.236
  444. gendstat: Mbuti.DG Russia_MA1_HG.SG 0.870
  445. gendstat: Mbuti.DG Georgia_Satsurblia.SG -2.274
  446. gendstat: Mbuti.DG Papuan.DG 0.616
  447. gendstat: Mbuti.DG Israel_Natufian_published 0.570
  448. gendstat: Mbuti.DG Russia_DevilsCave_N.SG 1.154
  449. gendstat: Mbuti.DG ONG.SG 0.717
  450. gendstat: Mbuti.DG Greece_Minoan_Lassithi 0.653
  451. gendstat: Mbuti.DG Russia_MLBA_Sintashta_published 1.410
  452. gendstat: Mbuti.DG Turkey_N -0.082
  453. gendstat: Russia_Ust_Ishim.DG China_Tianyuan 0.201
  454. gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG -0.436
  455. gendstat: Russia_Ust_Ishim.DG Iran_GanjDareh_N -0.229
  456. gendstat: Russia_Ust_Ishim.DG Georgia_Kotias.SG -1.721
  457. gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG 0.149
  458. gendstat: Russia_Ust_Ishim.DG Georgia_Satsurblia.SG -2.688
  459. gendstat: Russia_Ust_Ishim.DG Papuan.DG -0.340
  460. gendstat: Russia_Ust_Ishim.DG Israel_Natufian_published 0.064
  461. gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG 0.186
  462. gendstat: Russia_Ust_Ishim.DG ONG.SG -0.263
  463. gendstat: Russia_Ust_Ishim.DG Greece_Minoan_Lassithi -0.251
  464. gendstat: Russia_Ust_Ishim.DG Russia_MLBA_Sintashta_published 0.831
  465. gendstat: Russia_Ust_Ishim.DG Turkey_N -0.946
  466. gendstat: China_Tianyuan Goyet_Neanderthal.SG -0.588
  467. gendstat: China_Tianyuan Iran_GanjDareh_N -0.412
  468. gendstat: China_Tianyuan Georgia_Kotias.SG -1.799
  469. gendstat: China_Tianyuan Russia_MA1_HG.SG -0.037
  470. gendstat: China_Tianyuan Georgia_Satsurblia.SG -2.590
  471. gendstat: China_Tianyuan Papuan.DG -0.549
  472. gendstat: China_Tianyuan Israel_Natufian_published -0.072
  473. gendstat: China_Tianyuan Russia_DevilsCave_N.SG -0.040
  474. gendstat: China_Tianyuan ONG.SG -0.478
  475. gendstat: China_Tianyuan Greece_Minoan_Lassithi -0.439
  476. gendstat: China_Tianyuan Russia_MLBA_Sintashta_published 0.681
  477. gendstat: China_Tianyuan Turkey_N -1.098
  478. gendstat: Goyet_Neanderthal.SG Iran_GanjDareh_N 0.277
  479. gendstat: Goyet_Neanderthal.SG Georgia_Kotias.SG -1.296
  480. gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG 0.532
  481. gendstat: Goyet_Neanderthal.SG Georgia_Satsurblia.SG -2.134
  482. gendstat: Goyet_Neanderthal.SG Papuan.DG 0.169
  483. gendstat: Goyet_Neanderthal.SG Israel_Natufian_published 0.355
  484. gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG 0.639
  485. gendstat: Goyet_Neanderthal.SG ONG.SG 0.259
  486. gendstat: Goyet_Neanderthal.SG Greece_Minoan_Lassithi 0.236
  487. gendstat: Goyet_Neanderthal.SG Russia_MLBA_Sintashta_published 1.126
  488. gendstat: Goyet_Neanderthal.SG Turkey_N -0.366
  489. gendstat: Iran_GanjDareh_N Georgia_Kotias.SG -1.879
  490. gendstat: Iran_GanjDareh_N Russia_MA1_HG.SG 0.366
  491. gendstat: Iran_GanjDareh_N Georgia_Satsurblia.SG -2.850
  492. gendstat: Iran_GanjDareh_N Papuan.DG -0.138
  493. gendstat: Iran_GanjDareh_N Israel_Natufian_published 0.201
  494. gendstat: Iran_GanjDareh_N Russia_DevilsCave_N.SG 0.468
  495. gendstat: Iran_GanjDareh_N ONG.SG -0.031
  496. gendstat: Iran_GanjDareh_N Greece_Minoan_Lassithi -0.048
  497. gendstat: Iran_GanjDareh_N Russia_MLBA_Sintashta_published 1.018
  498. gendstat: Iran_GanjDareh_N Turkey_N -0.935
  499. gendstat: Georgia_Kotias.SG Russia_MA1_HG.SG 1.700
  500. gendstat: Georgia_Kotias.SG Georgia_Satsurblia.SG -1.034
  501. gendstat: Georgia_Kotias.SG Papuan.DG 1.536
  502. gendstat: Georgia_Kotias.SG Israel_Natufian_published 1.263
  503. gendstat: Georgia_Kotias.SG Russia_DevilsCave_N.SG 2.080
  504. gendstat: Georgia_Kotias.SG ONG.SG 1.702
  505. gendstat: Georgia_Kotias.SG Greece_Minoan_Lassithi 1.765
  506. gendstat: Georgia_Kotias.SG Russia_MLBA_Sintashta_published 2.162
  507. gendstat: Georgia_Kotias.SG Turkey_N 1.286
  508. gendstat: Russia_MA1_HG.SG Georgia_Satsurblia.SG -2.480
  509. gendstat: Russia_MA1_HG.SG Papuan.DG -0.460
  510. gendstat: Russia_MA1_HG.SG Israel_Natufian_published -0.043
  511. gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG 0.005
  512. gendstat: Russia_MA1_HG.SG ONG.SG -0.402
  513. gendstat: Russia_MA1_HG.SG Greece_Minoan_Lassithi -0.392
  514. gendstat: Russia_MA1_HG.SG Russia_MLBA_Sintashta_published 0.672
  515. gendstat: Russia_MA1_HG.SG Turkey_N -0.983
  516. gendstat: Georgia_Satsurblia.SG Papuan.DG 2.596
  517. gendstat: Georgia_Satsurblia.SG Israel_Natufian_published 1.888
  518. gendstat: Georgia_Satsurblia.SG Russia_DevilsCave_N.SG 2.896
  519. gendstat: Georgia_Satsurblia.SG ONG.SG 2.794
  520. gendstat: Georgia_Satsurblia.SG Greece_Minoan_Lassithi 2.692
  521. gendstat: Georgia_Satsurblia.SG Russia_MLBA_Sintashta_published 2.728
  522. gendstat: Georgia_Satsurblia.SG Turkey_N 2.376
  523. gendstat: Papuan.DG Israel_Natufian_published 0.269
  524. gendstat: Papuan.DG Russia_DevilsCave_N.SG 0.642
  525. gendstat: Papuan.DG ONG.SG 0.122
  526. gendstat: Papuan.DG Greece_Minoan_Lassithi 0.089
  527. gendstat: Papuan.DG Russia_MLBA_Sintashta_published 1.059
  528. gendstat: Papuan.DG Turkey_N -0.700
  529. gendstat: Israel_Natufian_published Russia_DevilsCave_N.SG 0.051
  530. gendstat: Israel_Natufian_published ONG.SG -0.218
  531. gendstat: Israel_Natufian_published Greece_Minoan_Lassithi -0.227
  532. gendstat: Israel_Natufian_published Russia_MLBA_Sintashta_published 0.580
  533. gendstat: Israel_Natufian_published Turkey_N -0.630
  534. gendstat: Russia_DevilsCave_N.SG ONG.SG -0.559
  535. gendstat: Russia_DevilsCave_N.SG Greece_Minoan_Lassithi -0.494
  536. gendstat: Russia_DevilsCave_N.SG Russia_MLBA_Sintashta_published 0.714
  537. gendstat: Russia_DevilsCave_N.SG Turkey_N -1.329
  538. gendstat: ONG.SG Greece_Minoan_Lassithi -0.014
  539. gendstat: ONG.SG Russia_MLBA_Sintashta_published 1.015
  540. gendstat: ONG.SG Turkey_N -0.851
  541. gendstat: Greece_Minoan_Lassithi Russia_MLBA_Sintashta_published 1.096
  542. gendstat: Greece_Minoan_Lassithi Turkey_N -1.083
  543. gendstat: Russia_MLBA_Sintashta_published Turkey_N -1.602
  544.  
  545. ##end of qpAdm: 2.339 seconds cpu 0.823 Mbytes in use
  546.  
  547. -------------------------------------------------------------------------------------
  548.  
  549. qpAdm: parameter file: parqpadm.txt
  550. ### THE INPUT PARAMETERS
  551. ##PARAMETER NAME: VALUE
  552. fstatsname: fstatsa.txt
  553. popleft: left.txt
  554. popright: right.txt
  555. details: YES
  556. ## qpAdm version: 1520
  557. seed: 1846978267
  558. *** recommended that inbreed be explicitly set ***
  559. inbreed set NO
  560.  
  561. left pops:
  562. ponticgreek2
  563. Iberia_Emporion
  564. Iran_IA_HajjiFiruz
  565.  
  566. right pops:
  567. Mbuti.DG
  568. Russia_Ust_Ishim.DG
  569. China_Tianyuan
  570. Goyet_Neanderthal.SG
  571. Iran_GanjDareh_N
  572. Georgia_Kotias.SG
  573. Russia_MA1_HG.SG
  574. Georgia_Satsurblia.SG
  575. Papuan.DG
  576. Israel_Natufian_published
  577. Russia_DevilsCave_N.SG
  578. ONG.SG
  579. Greece_Minoan_Lassithi
  580. Russia_MLBA_Sintashta_published
  581. Turkey_N
  582.  
  583. codimension 1
  584. f4info:
  585. f4rank: 1 dof: 13 chisq: 18.147 tail: 0.152014628 dofdiff: 15 chisqdiff: -18.147 taildiff: 1
  586. B:
  587. scale 1.000
  588. Russia_Ust_Ishim.DG 0.428
  589. China_Tianyuan 0.003
  590. Goyet_Neanderthal.SG 0.492
  591. Iran_GanjDareh_N -1.465
  592. Georgia_Kotias.SG -0.535
  593. Russia_MA1_HG.SG -0.253
  594. Georgia_Satsurblia.SG -1.104
  595. Papuan.DG -0.343
  596. Israel_Natufian_published 1.180
  597. Russia_DevilsCave_N.SG 0.021
  598. ONG.SG -0.187
  599. Greece_Minoan_Lassithi 1.945
  600. Russia_MLBA_Sintashta_published 0.712
  601. Turkey_N 2.005
  602. A:
  603. scale 1007.324
  604. Iberia_Emporion 0.957
  605. Iran_IA_HajjiFiruz -1.041
  606.  
  607.  
  608. full rank
  609. f4info:
  610. f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 13 chisqdiff: 18.147 taildiff: 0.152014628
  611. B:
  612. scale 770.392 731.780
  613. Russia_Ust_Ishim.DG 0.154 -0.445
  614. China_Tianyuan -0.392 -0.427
  615. Goyet_Neanderthal.SG 0.105 -0.579
  616. Iran_GanjDareh_N -1.686 0.452
  617. Georgia_Kotias.SG -1.736 -1.046
  618. Russia_MA1_HG.SG -0.858 -0.569
  619. Georgia_Satsurblia.SG -2.105 -0.611
  620. Papuan.DG -0.213 0.261
  621. Israel_Natufian_published 0.547 -1.373
  622. Russia_DevilsCave_N.SG -0.035 -0.021
  623. ONG.SG -0.632 -0.432
  624. Greece_Minoan_Lassithi 1.030 -1.919
  625. Russia_MLBA_Sintashta_published 0.678 -0.297
  626. Turkey_N 0.724 -2.319
  627. A:
  628. scale 1.414 1.414
  629. Iberia_Emporion 1.414 0.000
  630. Iran_IA_HajjiFiruz 0.000 1.414
  631.  
  632.  
  633. best coefficients: 0.521 0.479
  634. totmean: 0.521 0.479
  635. boot mean: 0.520 0.480
  636. std. errors: 0.056 0.056
  637.  
  638. error covariance (* 1,000,000)
  639. 3132 -3132
  640. -3132 3132
  641.  
  642.  
  643. summ: ponticgreek2 2 0.152015 0.520 0.480 3132 -3132 3132
  644.  
  645. fixed pat wt dof chisq tail prob
  646. 00 0 13 18.147 0.152015 0.521 0.479
  647. 01 1 14 86.793 1.52525e-12 1.000 0.000
  648. 10 1 14 83.393 6.61215e-12 0.000 1.000
  649. best pat: 00 0.152015 - -
  650. best pat: 10 6.61215e-12 chi(nested): 65.245 p-value for nested model: 6.61256e-16
  651.  
  652. coeffs: 0.521 0.479
  653.  
  654. ## dscore:: f_4(Base, Fit, Rbase, right2)
  655. ## genstat:: f_4(Base, Fit, right1, right2)
  656.  
  657. details: Iberia_Emporion Russia_Ust_Ishim.DG 0.000200 0.330121
  658. details: Iran_IA_HajjiFiruz Russia_Ust_Ishim.DG -0.000609 -0.865568
  659. dscore: Russia_Ust_Ishim.DG f4: -0.000187 Z: -0.317498
  660.  
  661. details: Iberia_Emporion China_Tianyuan -0.000509 -0.706567
  662. details: Iran_IA_HajjiFiruz China_Tianyuan -0.000583 -0.711628
  663. dscore: China_Tianyuan f4: -0.000545 Z: -0.777625
  664.  
  665. details: Iberia_Emporion Goyet_Neanderthal.SG 0.000136 0.260673
  666. details: Iran_IA_HajjiFiruz Goyet_Neanderthal.SG -0.000791 -1.303875
  667. dscore: Goyet_Neanderthal.SG f4: -0.000308 Z: -0.601532
  668.  
  669. details: Iberia_Emporion Iran_GanjDareh_N -0.002188 -4.545180
  670. details: Iran_IA_HajjiFiruz Iran_GanjDareh_N 0.000618 1.055480
  671. dscore: Iran_GanjDareh_N f4: -0.000844 Z: -1.756740
  672.  
  673. details: Iberia_Emporion Georgia_Kotias.SG -0.002253 -2.936861
  674. details: Iran_IA_HajjiFiruz Georgia_Kotias.SG -0.001429 -1.648821
  675. dscore: Georgia_Kotias.SG f4: -0.001858 Z: -2.479582
  676.  
  677. details: Iberia_Emporion Russia_MA1_HG.SG -0.001113 -1.450202
  678. details: Iran_IA_HajjiFiruz Russia_MA1_HG.SG -0.000778 -0.866477
  679. dscore: Russia_MA1_HG.SG f4: -0.000952 Z: -1.255846
  680.  
  681. details: Iberia_Emporion Georgia_Satsurblia.SG -0.002733 -3.649685
  682. details: Iran_IA_HajjiFiruz Georgia_Satsurblia.SG -0.000836 -1.002542
  683. dscore: Georgia_Satsurblia.SG f4: -0.001824 Z: -2.548717
  684.  
  685. details: Iberia_Emporion Papuan.DG -0.000276 -0.537497
  686. details: Iran_IA_HajjiFiruz Papuan.DG 0.000357 0.605553
  687. dscore: Papuan.DG f4: 0.000027 Z: 0.055100
  688.  
  689. details: Iberia_Emporion Israel_Natufian_published 0.000709 0.694498
  690. details: Iran_IA_HajjiFiruz Israel_Natufian_published -0.001876 -1.688540
  691. dscore: Israel_Natufian_published f4: -0.000529 Z: -0.542328
  692.  
  693. details: Iberia_Emporion Russia_DevilsCave_N.SG -0.000046 -0.080311
  694. details: Iran_IA_HajjiFiruz Russia_DevilsCave_N.SG -0.000028 -0.043153
  695. dscore: Russia_DevilsCave_N.SG f4: -0.000037 Z: -0.068054
  696.  
  697. details: Iberia_Emporion ONG.SG -0.000821 -1.605256
  698. details: Iran_IA_HajjiFiruz ONG.SG -0.000590 -0.983390
  699. dscore: ONG.SG f4: -0.000710 Z: -1.410424
  700.  
  701. details: Iberia_Emporion Greece_Minoan_Lassithi 0.001337 2.491166
  702. details: Iran_IA_HajjiFiruz Greece_Minoan_Lassithi -0.002623 -4.212334
  703. dscore: Greece_Minoan_Lassithi f4: -0.000560 Z: -1.063528
  704.  
  705. details: Iberia_Emporion Russia_MLBA_Sintashta_published 0.000880 0.907331
  706. details: Iran_IA_HajjiFiruz Russia_MLBA_Sintashta_published -0.000406 -0.373073
  707. dscore: Russia_MLBA_Sintashta_published f4: 0.000264 Z: 0.279923
  708.  
  709. details: Iberia_Emporion Turkey_N 0.000940 2.096853
  710. details: Iran_IA_HajjiFiruz Turkey_N -0.003168 -6.059199
  711. dscore: Turkey_N f4: -0.001028 Z: -2.344463
  712.  
  713. gendstat: Mbuti.DG Russia_Ust_Ishim.DG -0.317
  714. gendstat: Mbuti.DG China_Tianyuan -0.778
  715. gendstat: Mbuti.DG Goyet_Neanderthal.SG -0.602
  716. gendstat: Mbuti.DG Iran_GanjDareh_N -1.757
  717. gendstat: Mbuti.DG Georgia_Kotias.SG -2.480
  718. gendstat: Mbuti.DG Russia_MA1_HG.SG -1.256
  719. gendstat: Mbuti.DG Georgia_Satsurblia.SG -2.549
  720. gendstat: Mbuti.DG Papuan.DG 0.055
  721. gendstat: Mbuti.DG Israel_Natufian_published -0.542
  722. gendstat: Mbuti.DG Russia_DevilsCave_N.SG -0.068
  723. gendstat: Mbuti.DG ONG.SG -1.410
  724. gendstat: Mbuti.DG Greece_Minoan_Lassithi -1.064
  725. gendstat: Mbuti.DG Russia_MLBA_Sintashta_published 0.280
  726. gendstat: Mbuti.DG Turkey_N -2.344
  727. gendstat: Russia_Ust_Ishim.DG China_Tianyuan -0.482
  728. gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG -0.166
  729. gendstat: Russia_Ust_Ishim.DG Iran_GanjDareh_N -1.060
  730. gendstat: Russia_Ust_Ishim.DG Georgia_Kotias.SG -1.996
  731. gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG -1.011
  732. gendstat: Russia_Ust_Ishim.DG Georgia_Satsurblia.SG -1.967
  733. gendstat: Russia_Ust_Ishim.DG Papuan.DG 0.347
  734. gendstat: Russia_Ust_Ishim.DG Israel_Natufian_published -0.332
  735. gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG 0.232
  736. gendstat: Russia_Ust_Ishim.DG ONG.SG -0.889
  737. gendstat: Russia_Ust_Ishim.DG Greece_Minoan_Lassithi -0.573
  738. gendstat: Russia_Ust_Ishim.DG Russia_MLBA_Sintashta_published 0.455
  739. gendstat: Russia_Ust_Ishim.DG Turkey_N -1.483
  740. gendstat: China_Tianyuan Goyet_Neanderthal.SG 0.280
  741. gendstat: China_Tianyuan Iran_GanjDareh_N -0.423
  742. gendstat: China_Tianyuan Georgia_Kotias.SG -1.516
  743. gendstat: China_Tianyuan Russia_MA1_HG.SG -0.463
  744. gendstat: China_Tianyuan Georgia_Satsurblia.SG -1.406
  745. gendstat: China_Tianyuan Papuan.DG 0.816
  746. gendstat: China_Tianyuan Israel_Natufian_published 0.014
  747. gendstat: China_Tianyuan Russia_DevilsCave_N.SG 0.745
  748. gendstat: China_Tianyuan ONG.SG -0.245
  749. gendstat: China_Tianyuan Greece_Minoan_Lassithi -0.020
  750. gendstat: China_Tianyuan Russia_MLBA_Sintashta_published 0.791
  751. gendstat: China_Tianyuan Turkey_N -0.736
  752. gendstat: Goyet_Neanderthal.SG Iran_GanjDareh_N -0.793
  753. gendstat: Goyet_Neanderthal.SG Georgia_Kotias.SG -1.676
  754. gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG -0.727
  755. gendstat: Goyet_Neanderthal.SG Georgia_Satsurblia.SG -1.760
  756. gendstat: Goyet_Neanderthal.SG Papuan.DG 0.510
  757. gendstat: Goyet_Neanderthal.SG Israel_Natufian_published -0.207
  758. gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG 0.369
  759. gendstat: Goyet_Neanderthal.SG ONG.SG -0.607
  760. gendstat: Goyet_Neanderthal.SG Greece_Minoan_Lassithi -0.355
  761. gendstat: Goyet_Neanderthal.SG Russia_MLBA_Sintashta_published 0.541
  762. gendstat: Goyet_Neanderthal.SG Turkey_N -1.126
  763. gendstat: Iran_GanjDareh_N Georgia_Kotias.SG -1.433
  764. gendstat: Iran_GanjDareh_N Russia_MA1_HG.SG -0.149
  765. gendstat: Iran_GanjDareh_N Georgia_Satsurblia.SG -1.395
  766. gendstat: Iran_GanjDareh_N Papuan.DG 1.606
  767. gendstat: Iran_GanjDareh_N Israel_Natufian_published 0.313
  768. gendstat: Iran_GanjDareh_N Russia_DevilsCave_N.SG 1.436
  769. gendstat: Iran_GanjDareh_N ONG.SG 0.257
  770. gendstat: Iran_GanjDareh_N Greece_Minoan_Lassithi 0.577
  771. gendstat: Iran_GanjDareh_N Russia_MLBA_Sintashta_published 1.194
  772. gendstat: Iran_GanjDareh_N Turkey_N -0.435
  773. gendstat: Georgia_Kotias.SG Russia_MA1_HG.SG 1.013
  774. gendstat: Georgia_Kotias.SG Georgia_Satsurblia.SG 0.040
  775. gendstat: Georgia_Kotias.SG Papuan.DG 2.265
  776. gendstat: Georgia_Kotias.SG Israel_Natufian_published 1.153
  777. gendstat: Georgia_Kotias.SG Russia_DevilsCave_N.SG 2.459
  778. gendstat: Georgia_Kotias.SG ONG.SG 1.566
  779. gendstat: Georgia_Kotias.SG Greece_Minoan_Lassithi 1.749
  780. gendstat: Georgia_Kotias.SG Russia_MLBA_Sintashta_published 2.043
  781. gendstat: Georgia_Kotias.SG Turkey_N 1.265
  782. gendstat: Russia_MA1_HG.SG Georgia_Satsurblia.SG -0.939
  783. gendstat: Russia_MA1_HG.SG Papuan.DG 1.284
  784. gendstat: Russia_MA1_HG.SG Israel_Natufian_published 0.381
  785. gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG 1.171
  786. gendstat: Russia_MA1_HG.SG ONG.SG 0.331
  787. gendstat: Russia_MA1_HG.SG Greece_Minoan_Lassithi 0.510
  788. gendstat: Russia_MA1_HG.SG Russia_MLBA_Sintashta_published 1.140
  789. gendstat: Russia_MA1_HG.SG Turkey_N -0.105
  790. gendstat: Georgia_Satsurblia.SG Papuan.DG 2.394
  791. gendstat: Georgia_Satsurblia.SG Israel_Natufian_published 1.158
  792. gendstat: Georgia_Satsurblia.SG Russia_DevilsCave_N.SG 2.268
  793. gendstat: Georgia_Satsurblia.SG ONG.SG 1.440
  794. gendstat: Georgia_Satsurblia.SG Greece_Minoan_Lassithi 1.702
  795. gendstat: Georgia_Satsurblia.SG Russia_MLBA_Sintashta_published 1.980
  796. gendstat: Georgia_Satsurblia.SG Turkey_N 1.177
  797. gendstat: Papuan.DG Israel_Natufian_published -0.573
  798. gendstat: Papuan.DG Russia_DevilsCave_N.SG -0.116
  799. gendstat: Papuan.DG ONG.SG -1.496
  800. gendstat: Papuan.DG Greece_Minoan_Lassithi -1.013
  801. gendstat: Papuan.DG Russia_MLBA_Sintashta_published 0.244
  802. gendstat: Papuan.DG Turkey_N -2.059
  803. gendstat: Israel_Natufian_published Russia_DevilsCave_N.SG 0.473
  804. gendstat: Israel_Natufian_published ONG.SG -0.182
  805. gendstat: Israel_Natufian_published Greece_Minoan_Lassithi -0.030
  806. gendstat: Israel_Natufian_published Russia_MLBA_Sintashta_published 0.629
  807. gendstat: Israel_Natufian_published Turkey_N -0.530
  808. gendstat: Russia_DevilsCave_N.SG ONG.SG -1.320
  809. gendstat: Russia_DevilsCave_N.SG Greece_Minoan_Lassithi -0.831
  810. gendstat: Russia_DevilsCave_N.SG Russia_MLBA_Sintashta_published 0.313
  811. gendstat: Russia_DevilsCave_N.SG Turkey_N -1.909
  812. gendstat: ONG.SG Greece_Minoan_Lassithi 0.268
  813. gendstat: ONG.SG Russia_MLBA_Sintashta_published 1.054
  814. gendstat: ONG.SG Turkey_N -0.685
  815. gendstat: Greece_Minoan_Lassithi Russia_MLBA_Sintashta_published 0.889
  816. gendstat: Greece_Minoan_Lassithi Turkey_N -1.224
  817. gendstat: Russia_MLBA_Sintashta_published Turkey_N -1.498
  818.  
  819. ##end of qpAdm: 2.290 seconds cpu 0.827 Mbytes in use
  820.  
  821. -------------------------------------------------------------------------------
  822.  
  823. qpAdm: parameter file: parqpadm.txt
  824. ### THE INPUT PARAMETERS
  825. ##PARAMETER NAME: VALUE
  826. fstatsname: fstatsa.txt
  827. popleft: left.txt
  828. popright: right.txt
  829. details: YES
  830. ## qpAdm version: 1520
  831. seed: 1846978267
  832. *** recommended that inbreed be explicitly set ***
  833. inbreed set NO
  834.  
  835. left pops:
  836. ponticgreek2
  837. Iberia_Emporion
  838. Iran_IA_HajjiFiruz
  839.  
  840. right pops:
  841. Mbuti.DG
  842. Russia_Ust_Ishim.DG
  843. China_Tianyuan
  844. Goyet_Neanderthal.SG
  845. Iran_GanjDareh_N
  846. Georgia_Kotias.SG
  847. Russia_MA1_HG.SG
  848. Georgia_Satsurblia.SG
  849. Papuan.DG
  850. Israel_Natufian_published
  851. Russia_DevilsCave_N.SG
  852. ONG.SG
  853. Greece_Minoan_Lassithi
  854. Russia_MLBA_Sintashta_published
  855. Turkey_N
  856.  
  857. codimension 1
  858. f4info:
  859. f4rank: 1 dof: 13 chisq: 18.147 tail: 0.152014628 dofdiff: 15 chisqdiff: -18.147 taildiff: 1
  860. B:
  861. scale 1.000
  862. Russia_Ust_Ishim.DG 0.428
  863. China_Tianyuan 0.003
  864. Goyet_Neanderthal.SG 0.492
  865. Iran_GanjDareh_N -1.465
  866. Georgia_Kotias.SG -0.535
  867. Russia_MA1_HG.SG -0.253
  868. Georgia_Satsurblia.SG -1.104
  869. Papuan.DG -0.343
  870. Israel_Natufian_published 1.180
  871. Russia_DevilsCave_N.SG 0.021
  872. ONG.SG -0.187
  873. Greece_Minoan_Lassithi 1.945
  874. Russia_MLBA_Sintashta_published 0.712
  875. Turkey_N 2.005
  876. A:
  877. scale 1007.324
  878. Iberia_Emporion 0.957
  879. Iran_IA_HajjiFiruz -1.041
  880.  
  881.  
  882. full rank
  883. f4info:
  884. f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 13 chisqdiff: 18.147 taildiff: 0.152014628
  885. B:
  886. scale 770.392 731.780
  887. Russia_Ust_Ishim.DG 0.154 -0.445
  888. China_Tianyuan -0.392 -0.427
  889. Goyet_Neanderthal.SG 0.105 -0.579
  890. Iran_GanjDareh_N -1.686 0.452
  891. Georgia_Kotias.SG -1.736 -1.046
  892. Russia_MA1_HG.SG -0.858 -0.569
  893. Georgia_Satsurblia.SG -2.105 -0.611
  894. Papuan.DG -0.213 0.261
  895. Israel_Natufian_published 0.547 -1.373
  896. Russia_DevilsCave_N.SG -0.035 -0.021
  897. ONG.SG -0.632 -0.432
  898. Greece_Minoan_Lassithi 1.030 -1.919
  899. Russia_MLBA_Sintashta_published 0.678 -0.297
  900. Turkey_N 0.724 -2.319
  901. A:
  902. scale 1.414 1.414
  903. Iberia_Emporion 1.414 0.000
  904. Iran_IA_HajjiFiruz 0.000 1.414
  905.  
  906.  
  907. best coefficients: 0.521 0.479
  908. totmean: 0.521 0.479
  909. boot mean: 0.520 0.480
  910. std. errors: 0.056 0.056
  911.  
  912. error covariance (* 1,000,000)
  913. 3132 -3132
  914. -3132 3132
  915.  
  916.  
  917. summ: ponticgreek2 2 0.152015 0.520 0.480 3132 -3132 3132
  918.  
  919. fixed pat wt dof chisq tail prob
  920. 00 0 13 18.147 0.152015 0.521 0.479
  921. 01 1 14 86.793 1.52525e-12 1.000 0.000
  922. 10 1 14 83.393 6.61215e-12 0.000 1.000
  923. best pat: 00 0.152015 - -
  924. best pat: 10 6.61215e-12 chi(nested): 65.245 p-value for nested model: 6.61256e-16
  925.  
  926. coeffs: 0.521 0.479
  927.  
  928. ## dscore:: f_4(Base, Fit, Rbase, right2)
  929. ## genstat:: f_4(Base, Fit, right1, right2)
  930.  
  931. details: Iberia_Emporion Russia_Ust_Ishim.DG 0.000200 0.330121
  932. details: Iran_IA_HajjiFiruz Russia_Ust_Ishim.DG -0.000609 -0.865568
  933. dscore: Russia_Ust_Ishim.DG f4: -0.000187 Z: -0.317498
  934.  
  935. details: Iberia_Emporion China_Tianyuan -0.000509 -0.706567
  936. details: Iran_IA_HajjiFiruz China_Tianyuan -0.000583 -0.711628
  937. dscore: China_Tianyuan f4: -0.000545 Z: -0.777625
  938.  
  939. details: Iberia_Emporion Goyet_Neanderthal.SG 0.000136 0.260673
  940. details: Iran_IA_HajjiFiruz Goyet_Neanderthal.SG -0.000791 -1.303875
  941. dscore: Goyet_Neanderthal.SG f4: -0.000308 Z: -0.601532
  942.  
  943. details: Iberia_Emporion Iran_GanjDareh_N -0.002188 -4.545180
  944. details: Iran_IA_HajjiFiruz Iran_GanjDareh_N 0.000618 1.055480
  945. dscore: Iran_GanjDareh_N f4: -0.000844 Z: -1.756740
  946.  
  947. details: Iberia_Emporion Georgia_Kotias.SG -0.002253 -2.936861
  948. details: Iran_IA_HajjiFiruz Georgia_Kotias.SG -0.001429 -1.648821
  949. dscore: Georgia_Kotias.SG f4: -0.001858 Z: -2.479582
  950.  
  951. details: Iberia_Emporion Russia_MA1_HG.SG -0.001113 -1.450202
  952. details: Iran_IA_HajjiFiruz Russia_MA1_HG.SG -0.000778 -0.866477
  953. dscore: Russia_MA1_HG.SG f4: -0.000952 Z: -1.255846
  954.  
  955. details: Iberia_Emporion Georgia_Satsurblia.SG -0.002733 -3.649685
  956. details: Iran_IA_HajjiFiruz Georgia_Satsurblia.SG -0.000836 -1.002542
  957. dscore: Georgia_Satsurblia.SG f4: -0.001824 Z: -2.548717
  958.  
  959. details: Iberia_Emporion Papuan.DG -0.000276 -0.537497
  960. details: Iran_IA_HajjiFiruz Papuan.DG 0.000357 0.605553
  961. dscore: Papuan.DG f4: 0.000027 Z: 0.055100
  962.  
  963. details: Iberia_Emporion Israel_Natufian_published 0.000709 0.694498
  964. details: Iran_IA_HajjiFiruz Israel_Natufian_published -0.001876 -1.688540
  965. dscore: Israel_Natufian_published f4: -0.000529 Z: -0.542328
  966.  
  967. details: Iberia_Emporion Russia_DevilsCave_N.SG -0.000046 -0.080311
  968. details: Iran_IA_HajjiFiruz Russia_DevilsCave_N.SG -0.000028 -0.043153
  969. dscore: Russia_DevilsCave_N.SG f4: -0.000037 Z: -0.068054
  970.  
  971. details: Iberia_Emporion ONG.SG -0.000821 -1.605256
  972. details: Iran_IA_HajjiFiruz ONG.SG -0.000590 -0.983390
  973. dscore: ONG.SG f4: -0.000710 Z: -1.410424
  974.  
  975. details: Iberia_Emporion Greece_Minoan_Lassithi 0.001337 2.491166
  976. details: Iran_IA_HajjiFiruz Greece_Minoan_Lassithi -0.002623 -4.212334
  977. dscore: Greece_Minoan_Lassithi f4: -0.000560 Z: -1.063528
  978.  
  979. details: Iberia_Emporion Russia_MLBA_Sintashta_published 0.000880 0.907331
  980. details: Iran_IA_HajjiFiruz Russia_MLBA_Sintashta_published -0.000406 -0.373073
  981. dscore: Russia_MLBA_Sintashta_published f4: 0.000264 Z: 0.279923
  982.  
  983. details: Iberia_Emporion Turkey_N 0.000940 2.096853
  984. details: Iran_IA_HajjiFiruz Turkey_N -0.003168 -6.059199
  985. dscore: Turkey_N f4: -0.001028 Z: -2.344463
  986.  
  987. gendstat: Mbuti.DG Russia_Ust_Ishim.DG -0.317
  988. gendstat: Mbuti.DG China_Tianyuan -0.778
  989. gendstat: Mbuti.DG Goyet_Neanderthal.SG -0.602
  990. gendstat: Mbuti.DG Iran_GanjDareh_N -1.757
  991. gendstat: Mbuti.DG Georgia_Kotias.SG -2.480
  992. gendstat: Mbuti.DG Russia_MA1_HG.SG -1.256
  993. gendstat: Mbuti.DG Georgia_Satsurblia.SG -2.549
  994. gendstat: Mbuti.DG Papuan.DG 0.055
  995. gendstat: Mbuti.DG Israel_Natufian_published -0.542
  996. gendstat: Mbuti.DG Russia_DevilsCave_N.SG -0.068
  997. gendstat: Mbuti.DG ONG.SG -1.410
  998. gendstat: Mbuti.DG Greece_Minoan_Lassithi -1.064
  999. gendstat: Mbuti.DG Russia_MLBA_Sintashta_published 0.280
  1000. gendstat: Mbuti.DG Turkey_N -2.344
  1001. gendstat: Russia_Ust_Ishim.DG China_Tianyuan -0.482
  1002. gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG -0.166
  1003. gendstat: Russia_Ust_Ishim.DG Iran_GanjDareh_N -1.060
  1004. gendstat: Russia_Ust_Ishim.DG Georgia_Kotias.SG -1.996
  1005. gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG -1.011
  1006. gendstat: Russia_Ust_Ishim.DG Georgia_Satsurblia.SG -1.967
  1007. gendstat: Russia_Ust_Ishim.DG Papuan.DG 0.347
  1008. gendstat: Russia_Ust_Ishim.DG Israel_Natufian_published -0.332
  1009. gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG 0.232
  1010. gendstat: Russia_Ust_Ishim.DG ONG.SG -0.889
  1011. gendstat: Russia_Ust_Ishim.DG Greece_Minoan_Lassithi -0.573
  1012. gendstat: Russia_Ust_Ishim.DG Russia_MLBA_Sintashta_published 0.455
  1013. gendstat: Russia_Ust_Ishim.DG Turkey_N -1.483
  1014. gendstat: China_Tianyuan Goyet_Neanderthal.SG 0.280
  1015. gendstat: China_Tianyuan Iran_GanjDareh_N -0.423
  1016. gendstat: China_Tianyuan Georgia_Kotias.SG -1.516
  1017. gendstat: China_Tianyuan Russia_MA1_HG.SG -0.463
  1018. gendstat: China_Tianyuan Georgia_Satsurblia.SG -1.406
  1019. gendstat: China_Tianyuan Papuan.DG 0.816
  1020. gendstat: China_Tianyuan Israel_Natufian_published 0.014
  1021. gendstat: China_Tianyuan Russia_DevilsCave_N.SG 0.745
  1022. gendstat: China_Tianyuan ONG.SG -0.245
  1023. gendstat: China_Tianyuan Greece_Minoan_Lassithi -0.020
  1024. gendstat: China_Tianyuan Russia_MLBA_Sintashta_published 0.791
  1025. gendstat: China_Tianyuan Turkey_N -0.736
  1026. gendstat: Goyet_Neanderthal.SG Iran_GanjDareh_N -0.793
  1027. gendstat: Goyet_Neanderthal.SG Georgia_Kotias.SG -1.676
  1028. gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG -0.727
  1029. gendstat: Goyet_Neanderthal.SG Georgia_Satsurblia.SG -1.760
  1030. gendstat: Goyet_Neanderthal.SG Papuan.DG 0.510
  1031. gendstat: Goyet_Neanderthal.SG Israel_Natufian_published -0.207
  1032. gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG 0.369
  1033. gendstat: Goyet_Neanderthal.SG ONG.SG -0.607
  1034. gendstat: Goyet_Neanderthal.SG Greece_Minoan_Lassithi -0.355
  1035. gendstat: Goyet_Neanderthal.SG Russia_MLBA_Sintashta_published 0.541
  1036. gendstat: Goyet_Neanderthal.SG Turkey_N -1.126
  1037. gendstat: Iran_GanjDareh_N Georgia_Kotias.SG -1.433
  1038. gendstat: Iran_GanjDareh_N Russia_MA1_HG.SG -0.149
  1039. gendstat: Iran_GanjDareh_N Georgia_Satsurblia.SG -1.395
  1040. gendstat: Iran_GanjDareh_N Papuan.DG 1.606
  1041. gendstat: Iran_GanjDareh_N Israel_Natufian_published 0.313
  1042. gendstat: Iran_GanjDareh_N Russia_DevilsCave_N.SG 1.436
  1043. gendstat: Iran_GanjDareh_N ONG.SG 0.257
  1044. gendstat: Iran_GanjDareh_N Greece_Minoan_Lassithi 0.577
  1045. gendstat: Iran_GanjDareh_N Russia_MLBA_Sintashta_published 1.194
  1046. gendstat: Iran_GanjDareh_N Turkey_N -0.435
  1047. gendstat: Georgia_Kotias.SG Russia_MA1_HG.SG 1.013
  1048. gendstat: Georgia_Kotias.SG Georgia_Satsurblia.SG 0.040
  1049. gendstat: Georgia_Kotias.SG Papuan.DG 2.265
  1050. gendstat: Georgia_Kotias.SG Israel_Natufian_published 1.153
  1051. gendstat: Georgia_Kotias.SG Russia_DevilsCave_N.SG 2.459
  1052. gendstat: Georgia_Kotias.SG ONG.SG 1.566
  1053. gendstat: Georgia_Kotias.SG Greece_Minoan_Lassithi 1.749
  1054. gendstat: Georgia_Kotias.SG Russia_MLBA_Sintashta_published 2.043
  1055. gendstat: Georgia_Kotias.SG Turkey_N 1.265
  1056. gendstat: Russia_MA1_HG.SG Georgia_Satsurblia.SG -0.939
  1057. gendstat: Russia_MA1_HG.SG Papuan.DG 1.284
  1058. gendstat: Russia_MA1_HG.SG Israel_Natufian_published 0.381
  1059. gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG 1.171
  1060. gendstat: Russia_MA1_HG.SG ONG.SG 0.331
  1061. gendstat: Russia_MA1_HG.SG Greece_Minoan_Lassithi 0.510
  1062. gendstat: Russia_MA1_HG.SG Russia_MLBA_Sintashta_published 1.140
  1063. gendstat: Russia_MA1_HG.SG Turkey_N -0.105
  1064. gendstat: Georgia_Satsurblia.SG Papuan.DG 2.394
  1065. gendstat: Georgia_Satsurblia.SG Israel_Natufian_published 1.158
  1066. gendstat: Georgia_Satsurblia.SG Russia_DevilsCave_N.SG 2.268
  1067. gendstat: Georgia_Satsurblia.SG ONG.SG 1.440
  1068. gendstat: Georgia_Satsurblia.SG Greece_Minoan_Lassithi 1.702
  1069. gendstat: Georgia_Satsurblia.SG Russia_MLBA_Sintashta_published 1.980
  1070. gendstat: Georgia_Satsurblia.SG Turkey_N 1.177
  1071. gendstat: Papuan.DG Israel_Natufian_published -0.573
  1072. gendstat: Papuan.DG Russia_DevilsCave_N.SG -0.116
  1073. gendstat: Papuan.DG ONG.SG -1.496
  1074. gendstat: Papuan.DG Greece_Minoan_Lassithi -1.013
  1075. gendstat: Papuan.DG Russia_MLBA_Sintashta_published 0.244
  1076. gendstat: Papuan.DG Turkey_N -2.059
  1077. gendstat: Israel_Natufian_published Russia_DevilsCave_N.SG 0.473
  1078. gendstat: Israel_Natufian_published ONG.SG -0.182
  1079. gendstat: Israel_Natufian_published Greece_Minoan_Lassithi -0.030
  1080. gendstat: Israel_Natufian_published Russia_MLBA_Sintashta_published 0.629
  1081. gendstat: Israel_Natufian_published Turkey_N -0.530
  1082. gendstat: Russia_DevilsCave_N.SG ONG.SG -1.320
  1083. gendstat: Russia_DevilsCave_N.SG Greece_Minoan_Lassithi -0.831
  1084. gendstat: Russia_DevilsCave_N.SG Russia_MLBA_Sintashta_published 0.313
  1085. gendstat: Russia_DevilsCave_N.SG Turkey_N -1.909
  1086. gendstat: ONG.SG Greece_Minoan_Lassithi 0.268
  1087. gendstat: ONG.SG Russia_MLBA_Sintashta_published 1.054
  1088. gendstat: ONG.SG Turkey_N -0.685
  1089. gendstat: Greece_Minoan_Lassithi Russia_MLBA_Sintashta_published 0.889
  1090. gendstat: Greece_Minoan_Lassithi Turkey_N -1.224
  1091. gendstat: Russia_MLBA_Sintashta_published Turkey_N -1.498
  1092.  
  1093. ##end of qpAdm: 2.290 seconds cpu 0.827 Mbytes in use
  1094.  
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