Not a member of Pastebin yet?
Sign Up,
it unlocks many cool features!
- allsnps: YES
- ## qpAdm version: 1000
- seed: 1621044609
- read 1073741824 bytes
- read 2146675633 bytes
- packed geno read OK
- end of inpack
- left pops:
- Pakistan_H_SaiduSharif
- InPe_Native
- Kazakhstan_Kangju.SG
- right pops:
- Cameroon_SMA.DG
- EEHG
- WSHG
- PPN
- WEHG
- Anatolia_N
- Iran_GanjDareh_N
- Russia_UstBelaya_Angara
- ONG.SG
- Botai
- 0 Pakistan_H_SaiduSharif 10
- 1 InPe_Native 4
- 2 Kazakhstan_Kangju.SG 6
- 3 Cameroon_SMA.DG 1
- 4 EEHG 5
- 5 WSHG 3
- 6 PPN 11
- 7 WEHG 33
- 8 Anatolia_N 22
- 9 Iran_GanjDareh_N 8
- 10 Russia_UstBelaya_Angara 8
- 11 ONG.SG 6
- 12 Botai 2
- jackknife block size: 0.050
- snps: 1150510 indivs: 119
- number of blocks for block jackknife: 713
- ## ncols: 1150510
- coverage: Pakistan_H_SaiduSharif 1107970
- coverage: InPe_Native 841356
- coverage: Kazakhstan_Kangju.SG 1117223
- coverage: Cameroon_SMA.DG 1140138
- coverage: EEHG 1052093
- coverage: WSHG 858019
- coverage: PPN 847771
- coverage: WEHG 1140599
- coverage: Anatolia_N 1139031
- coverage: Iran_GanjDareh_N 1057358
- coverage: Russia_UstBelaya_Angara 1072574
- coverage: ONG.SG 1143397
- coverage: Botai 926654
- dof (jackknife): 620.158
- numsnps used: 1150510
- codimension 1
- f4info:
- f4rank: 1 dof: 8 chisq: 11.605 tail: 0.169712601 dofdiff: 10 chisqdiff: -11.605 taildiff: 1
- B:
- scale 1.000
- EEHG 1.364
- WSHG 0.841
- PPN 0.799
- WEHG 1.684
- Anatolia_N 1.289
- Iran_GanjDareh_N -0.217
- Russia_UstBelaya_Angara -0.047
- ONG.SG -0.642
- Botai 0.914
- A:
- scale 661.998
- InPe_Native -0.689
- Kazakhstan_Kangju.SG 1.235
- full rank
- f4info:
- f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 8 chisqdiff: 11.605 taildiff: 0.169712601
- B:
- scale 754.884 567.043
- EEHG -1.296 1.379
- WSHG -0.790 0.883
- PPN -0.924 0.738
- WEHG -1.642 1.656
- Anatolia_N -1.354 1.224
- Iran_GanjDareh_N -0.201 -0.399
- Russia_UstBelaya_Angara -0.198 -0.104
- ONG.SG 0.167 -0.818
- Botai -1.098 0.834
- A:
- scale 1.414 1.414
- InPe_Native 1.414 0.000
- Kazakhstan_Kangju.SG 0.000 1.414
- best coefficients: 0.642 0.358
- Jackknife mean: 0.641988175 0.358011825
- std. errors: 0.020 0.020
- error covariance (* 1,000,000)
- 411 -411
- -411 411
- summ: Pakistan_H_SaiduSharif 2 0.169713 0.642 0.358 411 -411 411
- fixed pat wt dof chisq tail prob
- 00 0 8 11.605 0.169713 0.642 0.358
- 01 1 9 216.916 0 1.000 0.000
- 10 1 9 560.803 0 0.000 1.000
- best pat: 00 0.169713 - -
- best pat: 01 9.3148e-42 chi(nested): 205.311 p-value for nested model: 1.4486e-46
- coeffs: 0.642 0.358
- ## dscore:: f_4(Base, Fit, Rbase, right2)
- ## genstat:: f_4(Base, Fit, right1, right2)
- details: InPe_Native EEHG -0.001716 -7.080423
- details: Kazakhstan_Kangju.SG EEHG 0.002432 9.443325
- dscore: EEHG f4: -0.000231 Z: -1.247793
- details: InPe_Native WSHG -0.001047 -3.844078
- details: Kazakhstan_Kangju.SG WSHG 0.001556 6.323788
- dscore: WSHG f4: -0.000115 Z: -0.555958
- details: InPe_Native PPN -0.001224 -5.112731
- details: Kazakhstan_Kangju.SG PPN 0.001302 6.012573
- dscore: PPN f4: -0.000320 Z: -1.729015
- details: InPe_Native WEHG -0.002175 -9.241424
- details: Kazakhstan_Kangju.SG WEHG 0.002920 12.364400
- dscore: WEHG f4: -0.000351 Z: -1.975411
- details: InPe_Native Anatolia_N -0.001794 -8.228455
- details: Kazakhstan_Kangju.SG Anatolia_N 0.002158 10.207969
- dscore: Anatolia_N f4: -0.000379 Z: -2.257097
- details: InPe_Native Iran_GanjDareh_N -0.000266 -1.217398
- details: Kazakhstan_Kangju.SG Iran_GanjDareh_N -0.000704 -3.177943
- dscore: Iran_GanjDareh_N f4: -0.000423 Z: -2.477675
- details: InPe_Native Russia_UstBelaya_Angara -0.000262 -1.140853
- details: Kazakhstan_Kangju.SG Russia_UstBelaya_Angara -0.000184 -0.789740
- dscore: Russia_UstBelaya_Angara f4: -0.000234 Z: -1.304645
- details: InPe_Native ONG.SG 0.000221 0.927219
- details: Kazakhstan_Kangju.SG ONG.SG -0.001443 -5.967600
- dscore: ONG.SG f4: -0.000375 Z: -2.053930
- details: InPe_Native Botai -0.001455 -5.446234
- details: Kazakhstan_Kangju.SG Botai 0.001470 5.901954
- dscore: Botai f4: -0.000408 Z: -2.001239
- gendstat: Cameroon_SMA.DG EEHG -1.248
- gendstat: Cameroon_SMA.DG WSHG -0.556
- gendstat: Cameroon_SMA.DG PPN -1.729
- gendstat: Cameroon_SMA.DG WEHG -1.975
- gendstat: Cameroon_SMA.DG Anatolia_N -2.257
- gendstat: Cameroon_SMA.DG Iran_GanjDareh_N -2.478
- gendstat: Cameroon_SMA.DG Russia_UstBelaya_Angara -1.305
- gendstat: Cameroon_SMA.DG ONG.SG -2.054
- gendstat: Cameroon_SMA.DG Botai -2.001
- gendstat: EEHG WSHG 0.699
- gendstat: EEHG PPN -0.500
- gendstat: EEHG WEHG -0.885
- gendstat: EEHG Anatolia_N -1.020
- gendstat: EEHG Iran_GanjDareh_N -1.125
- gendstat: EEHG Russia_UstBelaya_Angara -0.017
- gendstat: EEHG ONG.SG -0.770
- gendstat: EEHG Botai -1.073
- gendstat: WSHG PPN -1.015
- gendstat: WSHG WEHG -1.378
- gendstat: WSHG Anatolia_N -1.495
- gendstat: WSHG Iran_GanjDareh_N -1.577
- gendstat: WSHG Russia_UstBelaya_Angara -0.659
- gendstat: WSHG ONG.SG -1.294
- gendstat: WSHG Botai -1.719
- gendstat: PPN WEHG -0.206
- gendstat: PPN Anatolia_N -0.473
- gendstat: PPN Iran_GanjDareh_N -0.619
- gendstat: PPN Russia_UstBelaya_Angara 0.481
- gendstat: PPN ONG.SG -0.289
- gendstat: PPN Botai -0.454
- gendstat: WEHG Anatolia_N -0.256
- gendstat: WEHG Iran_GanjDareh_N -0.471
- gendstat: WEHG Russia_UstBelaya_Angara 0.728
- gendstat: WEHG ONG.SG -0.137
- gendstat: WEHG Botai -0.339
- gendstat: Anatolia_N Iran_GanjDareh_N -0.322
- gendstat: Anatolia_N Russia_UstBelaya_Angara 0.953
- gendstat: Anatolia_N ONG.SG 0.027
- gendstat: Anatolia_N Botai -0.165
- gendstat: Iran_GanjDareh_N Russia_UstBelaya_Angara 1.125
- gendstat: Iran_GanjDareh_N ONG.SG 0.259
- gendstat: Iran_GanjDareh_N Botai 0.078
- gendstat: Russia_UstBelaya_Angara ONG.SG -0.954
- gendstat: Russia_UstBelaya_Angara Botai -1.029
- gendstat: ONG.SG Botai -0.172
- ##end of qpAdm: 385.908 seconds cpu 1202.209 Mbytes in use
Add Comment
Please, Sign In to add comment
