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May 17th, 2022
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  1. qpAdm: parameter file: parqpadm.txt
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: /home/vrts/host/vrts1240K/fstatsa.txt
  5. popleft: /home/vrts/host/vrts1240K/left.txt
  6. popright: /home/vrts/host/vrts1240K/right.txt
  7. details: YES
  8. ## qpAdm version: 1520
  9. seed: 1204151585
  10. *** recommended that inbreed be explicitly set ***
  11. inbreed set NO
  12.  
  13. left pops:
  14. Armenian.DG
  15. Turkey_N.SG
  16. Russia_Samara_EBA_Yamnaya
  17. CHG
  18. Iran_N
  19.  
  20. right pops:
  21. Mbuti.DG
  22. Russia_Ust_Ishim.DG
  23. China_Tianyuan
  24. Goyet_Neanderthal.SG
  25. Russia_Sunghir3.SG
  26. Russia_Kostenki14.SG
  27. Russia_MA1_HG.SG
  28. SATP
  29. Russia_DevilsCave_N.SG
  30. Papuan.DG
  31. Switzerland_Bichon.SG
  32. Natufian
  33. Tarim_EMBA1
  34. Russia_Steppe_Eneolithic
  35. ONG.SG
  36.  
  37. codimension 1
  38. f4info:
  39. f4rank: 3 dof: 11 chisq: 16.702 tail: 0.116989534 dofdiff: 13 chisqdiff: -16.702 taildiff: 1
  40. B:
  41. scale 1.000 1.000 1.000
  42. Russia_Ust_Ishim.DG 0.305 0.255 0.149
  43. China_Tianyuan 0.554 0.147 -0.537
  44. Goyet_Neanderthal.SG 0.058 0.073 0.180
  45. Russia_Sunghir3.SG 0.587 0.735 1.088
  46. Russia_Kostenki14.SG 0.535 0.622 0.492
  47. Russia_MA1_HG.SG 1.623 0.550 -0.909
  48. SATP 1.051 -2.815 1.213
  49. Russia_DevilsCave_N.SG 0.608 -0.050 -0.043
  50. Papuan.DG 0.389 0.143 -0.439
  51. Switzerland_Bichon.SG 1.113 1.408 1.343
  52. Natufian -0.479 1.558 2.177
  53. Tarim_EMBA1 2.127 0.506 -1.655
  54. Russia_Steppe_Eneolithic 1.582 -0.158 -0.653
  55. ONG.SG 0.460 0.203 -0.172
  56. A:
  57. scale 435.301 644.541 1046.183
  58. Turkey_N.SG -0.099 0.614 1.183
  59. Russia_Samara_EBA_Yamnaya 1.775 0.539 -0.126
  60. CHG 0.852 -1.743 1.055
  61. Iran_N -0.337 -0.542 -1.214
  62.  
  63.  
  64. full rank
  65. f4info:
  66. f4rank: 4 dof: 0 chisq: 0.000 tail: 1 dofdiff: 11 chisqdiff: 16.702 taildiff: 0.116989534
  67. B:
  68. scale 634.777 242.633 318.621 549.353
  69. Russia_Ust_Ishim.DG 0.103 0.330 -0.001 -0.454
  70. China_Tianyuan -0.288 0.627 0.117 0.104
  71. Goyet_Neanderthal.SG 0.247 0.077 0.031 -0.119
  72. Russia_Sunghir3.SG 0.842 0.623 -0.018 -1.547
  73. Russia_Kostenki14.SG 0.358 0.561 -0.164 -1.173
  74. Russia_MA1_HG.SG -0.610 1.728 0.210 -0.512
  75. SATP -1.220 0.365 3.408 -0.164
  76. Russia_DevilsCave_N.SG -0.248 0.582 0.365 -0.305
  77. Papuan.DG -0.705 0.313 -0.164 -0.385
  78. Switzerland_Bichon.SG 1.711 1.383 -0.034 -1.934
  79. Natufian 2.166 -0.341 -1.133 -2.284
  80. Tarim_EMBA1 -1.423 2.170 0.251 -0.406
  81. Russia_Steppe_Eneolithic -0.906 1.521 0.888 -0.335
  82. ONG.SG -0.354 0.424 -0.045 -0.481
  83. A:
  84. scale 2.000 2.000 2.000 2.000
  85. Turkey_N.SG 2.000 0.000 0.000 0.000
  86. Russia_Samara_EBA_Yamnaya 0.000 2.000 0.000 0.000
  87. CHG 0.000 0.000 2.000 0.000
  88. Iran_N 0.000 0.000 0.000 2.000
  89.  
  90.  
  91. best coefficients: 0.428 0.089 0.040 0.443
  92. totmean: 0.428 0.089 0.040 0.443
  93. boot mean: 0.428 0.089 0.040 0.443
  94. std. errors: 0.032 0.026 0.033 0.051
  95.  
  96. error covariance (* 1,000,000)
  97. 1018 -127 65 -955
  98. -127 673 -37 -508
  99. 65 -37 1063 -1091
  100. -955 -508 -1091 2554
  101.  
  102.  
  103. summ: Armenian.DG 4 0.116990 0.428 0.089 0.040 0.443 1018 -127 65 -955 673 ...
  104. -37 -508 1063 -1091 2554
  105.  
  106. fixed pat wt dof chisq tail prob
  107. 0000 0 11 16.702 0.11699 0.428 0.089 0.040 0.443
  108. 0001 1 12 94.368 7.00731e-15 0.599 0.174 0.226 0.000
  109. 0010 1 12 18.693 0.0962058 0.425 0.091 0.000 0.484
  110. 0100 1 12 27.785 0.00594782 0.442 0.000 0.045 0.513
  111. 1000 1 12 158.825 9.11453e-28 0.000 0.111 -0.119 1.008 infeasible
  112. 0011 2 13 164.814 2.08567e-28 0.737 0.263 0.000 0.000
  113. 0101 2 13 131.802 9.15213e-22 0.674 0.000 0.326 0.000
  114. 0110 2 13 31.379 0.00296644 0.439 0.000 0.000 0.561
  115. 1001 2 13 397.216 0 0.000 -0.034 1.034 0.000 infeasible
  116. 1010 2 13 163.106 4.62959e-28 0.000 0.090 0.000 0.910
  117. 1100 2 13 167.546 5.81932e-29 0.000 0.000 -0.101 1.101 infeasible
  118. 0111 3 14 260.172 0 1.000 0.000 0.000 0.000
  119. 1011 3 14 1030.790 0 0.000 1.000 0.000 0.000
  120. 1101 3 14 397.302 0 0.000 0.000 1.000 0.000
  121. 1110 3 14 170.690 4.96693e-29 0.000 0.000 0.000 1.000
  122. best pat: 0000 0.11699 - -
  123. best pat: 0010 0.0962058 chi(nested): 1.991 p-value for nested model: 0.158263
  124. best pat: 0110 0.00296644 chi(nested): 12.686 p-value for nested model: 0.000368387
  125. best pat: 1110 4.96693e-29 chi(nested): 139.311 p-value for nested model: 3.76623e-32
  126.  
  127. coeffs: 0.428 0.089 0.040 0.443
  128.  
  129. ## dscore:: f_4(Base, Fit, Rbase, right2)
  130. ## genstat:: f_4(Base, Fit, right1, right2)
  131.  
  132. details: Turkey_N.SG Russia_Ust_Ishim.DG 0.000163 0.434389
  133. details: Russia_Samara_EBA_Yamnaya Russia_Ust_Ishim.DG 0.001359 3.787834
  134. details: CHG Russia_Ust_Ishim.DG -0.000004 -0.008204
  135. details: Iran_N Russia_Ust_Ishim.DG -0.000827 -2.141866
  136. dscore: Russia_Ust_Ishim.DG f4: -0.000176 Z: -0.558058
  137.  
  138. details: Turkey_N.SG China_Tianyuan -0.000454 -1.084074
  139. details: Russia_Samara_EBA_Yamnaya China_Tianyuan 0.002584 6.726839
  140. details: CHG China_Tianyuan 0.000369 0.660917
  141. details: Iran_N China_Tianyuan 0.000189 0.449878
  142. dscore: China_Tianyuan f4: 0.000133 Z: 0.380917
  143.  
  144. details: Turkey_N.SG Goyet_Neanderthal.SG 0.000389 1.420385
  145. details: Russia_Samara_EBA_Yamnaya Goyet_Neanderthal.SG 0.000318 1.238925
  146. details: CHG Goyet_Neanderthal.SG 0.000098 0.265263
  147. details: Iran_N Goyet_Neanderthal.SG -0.000216 -0.739497
  148. dscore: Goyet_Neanderthal.SG f4: 0.000103 Z: 0.453392
  149.  
  150. details: Turkey_N.SG Russia_Sunghir3.SG 0.001326 2.841951
  151. details: Russia_Samara_EBA_Yamnaya Russia_Sunghir3.SG 0.002569 6.320022
  152. details: CHG Russia_Sunghir3.SG -0.000056 -0.102016
  153. details: Iran_N Russia_Sunghir3.SG -0.002817 -6.277040
  154. dscore: Russia_Sunghir3.SG f4: -0.000455 Z: -1.200633
  155.  
  156. details: Turkey_N.SG Russia_Kostenki14.SG 0.000563 1.320054
  157. details: Russia_Samara_EBA_Yamnaya Russia_Kostenki14.SG 0.002311 6.068789
  158. details: CHG Russia_Kostenki14.SG -0.000514 -0.869739
  159. details: Iran_N Russia_Kostenki14.SG -0.002135 -4.742482
  160. dscore: Russia_Kostenki14.SG f4: -0.000520 Z: -1.411362
  161.  
  162. details: Turkey_N.SG Russia_MA1_HG.SG -0.000961 -2.019970
  163. details: Russia_Samara_EBA_Yamnaya Russia_MA1_HG.SG 0.007124 16.343685
  164. details: CHG Russia_MA1_HG.SG 0.000660 1.085688
  165. details: Iran_N Russia_MA1_HG.SG -0.000932 -1.906630
  166. dscore: Russia_MA1_HG.SG f4: -0.000165 Z: -0.409682
  167.  
  168. details: Turkey_N.SG SATP -0.001922 -4.266491
  169. details: Russia_Samara_EBA_Yamnaya SATP 0.001505 3.641787
  170. details: CHG SATP 0.010697 15.807081
  171. details: Iran_N SATP -0.000299 -0.643657
  172. dscore: SATP f4: -0.000389 Z: -1.018856
  173.  
  174. details: Turkey_N.SG Russia_DevilsCave_N.SG -0.000390 -1.094834
  175. details: Russia_Samara_EBA_Yamnaya Russia_DevilsCave_N.SG 0.002400 7.580275
  176. details: CHG Russia_DevilsCave_N.SG 0.001146 2.445495
  177. details: Iran_N Russia_DevilsCave_N.SG -0.000556 -1.475917
  178. dscore: Russia_DevilsCave_N.SG f4: -0.000154 Z: -0.507648
  179.  
  180. details: Turkey_N.SG Papuan.DG -0.001111 -3.293950
  181. details: Russia_Samara_EBA_Yamnaya Papuan.DG 0.001292 4.231097
  182. details: CHG Papuan.DG -0.000514 -1.206045
  183. details: Iran_N Papuan.DG -0.000701 -2.057642
  184. dscore: Papuan.DG f4: -0.000692 Z: -2.422088
  185.  
  186. details: Turkey_N.SG Switzerland_Bichon.SG 0.002695 6.087952
  187. details: Russia_Samara_EBA_Yamnaya Switzerland_Bichon.SG 0.005701 13.650713
  188. details: CHG Switzerland_Bichon.SG -0.000106 -0.178258
  189. details: Iran_N Switzerland_Bichon.SG -0.003521 -8.132123
  190. dscore: Switzerland_Bichon.SG f4: 0.000095 Z: 0.257956
  191.  
  192. details: Turkey_N.SG Natufian 0.003412 6.991054
  193. details: Russia_Samara_EBA_Yamnaya Natufian -0.001404 -3.295998
  194. details: CHG Natufian -0.003556 -5.561166
  195. details: Iran_N Natufian -0.004158 -8.848940
  196. dscore: Natufian f4: -0.000650 Z: -1.665257
  197.  
  198. details: Turkey_N.SG Tarim_EMBA1 -0.002241 -6.026560
  199. details: Russia_Samara_EBA_Yamnaya Tarim_EMBA1 0.008942 24.700700
  200. details: CHG Tarim_EMBA1 0.000788 1.643437
  201. details: Iran_N Tarim_EMBA1 -0.000739 -1.808180
  202. dscore: Tarim_EMBA1 f4: -0.000461 Z: -1.403306
  203.  
  204. details: Turkey_N.SG Russia_Steppe_Eneolithic -0.001427 -4.076320
  205. details: Russia_Samara_EBA_Yamnaya Russia_Steppe_Eneolithic 0.006270 19.961740
  206. details: CHG Russia_Steppe_Eneolithic 0.002785 6.075670
  207. details: Iran_N Russia_Steppe_Eneolithic -0.000611 -1.704156
  208. dscore: Russia_Steppe_Eneolithic f4: -0.000212 Z: -0.716003
  209.  
  210. details: Turkey_N.SG ONG.SG -0.000557 -1.682404
  211. details: Russia_Samara_EBA_Yamnaya ONG.SG 0.001748 5.850180
  212. details: CHG ONG.SG -0.000140 -0.326789
  213. details: Iran_N ONG.SG -0.000875 -2.614293
  214. dscore: ONG.SG f4: -0.000477 Z: -1.747755
  215.  
  216. gendstat: Mbuti.DG Russia_Ust_Ishim.DG -0.558
  217. gendstat: Mbuti.DG China_Tianyuan 0.381
  218. gendstat: Mbuti.DG Goyet_Neanderthal.SG 0.453
  219. gendstat: Mbuti.DG Russia_Sunghir3.SG -1.201
  220. gendstat: Mbuti.DG Russia_Kostenki14.SG -1.411
  221. gendstat: Mbuti.DG Russia_MA1_HG.SG -0.410
  222. gendstat: Mbuti.DG SATP -1.019
  223. gendstat: Mbuti.DG Russia_DevilsCave_N.SG -0.508
  224. gendstat: Mbuti.DG Papuan.DG -2.422
  225. gendstat: Mbuti.DG Switzerland_Bichon.SG 0.258
  226. gendstat: Mbuti.DG Natufian -1.665
  227. gendstat: Mbuti.DG Tarim_EMBA1 -1.403
  228. gendstat: Mbuti.DG Russia_Steppe_Eneolithic -0.716
  229. gendstat: Mbuti.DG ONG.SG -1.748
  230. gendstat: Russia_Ust_Ishim.DG China_Tianyuan 0.848
  231. gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG 0.736
  232. gendstat: Russia_Ust_Ishim.DG Russia_Sunghir3.SG -0.712
  233. gendstat: Russia_Ust_Ishim.DG Russia_Kostenki14.SG -0.857
  234. gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG 0.027
  235. gendstat: Russia_Ust_Ishim.DG SATP -0.513
  236. gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG 0.068
  237. gendstat: Russia_Ust_Ishim.DG Papuan.DG -1.568
  238. gendstat: Russia_Ust_Ishim.DG Switzerland_Bichon.SG 0.708
  239. gendstat: Russia_Ust_Ishim.DG Natufian -1.098
  240. gendstat: Russia_Ust_Ishim.DG Tarim_EMBA1 -0.849
  241. gendstat: Russia_Ust_Ishim.DG Russia_Steppe_Eneolithic -0.109
  242. gendstat: Russia_Ust_Ishim.DG ONG.SG -0.964
  243. gendstat: China_Tianyuan Goyet_Neanderthal.SG -0.075
  244. gendstat: China_Tianyuan Russia_Sunghir3.SG -1.487
  245. gendstat: China_Tianyuan Russia_Kostenki14.SG -1.614
  246. gendstat: China_Tianyuan Russia_MA1_HG.SG -0.725
  247. gendstat: China_Tianyuan SATP -1.251
  248. gendstat: China_Tianyuan Russia_DevilsCave_N.SG -0.859
  249. gendstat: China_Tianyuan Papuan.DG -2.554
  250. gendstat: China_Tianyuan Switzerland_Bichon.SG -0.098
  251. gendstat: China_Tianyuan Natufian -1.780
  252. gendstat: China_Tianyuan Tarim_EMBA1 -1.711
  253. gendstat: China_Tianyuan Russia_Steppe_Eneolithic -0.982
  254. gendstat: China_Tianyuan ONG.SG -1.845
  255. gendstat: Goyet_Neanderthal.SG Russia_Sunghir3.SG -1.323
  256. gendstat: Goyet_Neanderthal.SG Russia_Kostenki14.SG -1.442
  257. gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG -0.587
  258. gendstat: Goyet_Neanderthal.SG SATP -1.126
  259. gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG -0.692
  260. gendstat: Goyet_Neanderthal.SG Papuan.DG -2.157
  261. gendstat: Goyet_Neanderthal.SG Switzerland_Bichon.SG -0.018
  262. gendstat: Goyet_Neanderthal.SG Natufian -1.730
  263. gendstat: Goyet_Neanderthal.SG Tarim_EMBA1 -1.440
  264. gendstat: Goyet_Neanderthal.SG Russia_Steppe_Eneolithic -0.864
  265. gendstat: Goyet_Neanderthal.SG ONG.SG -1.653
  266. gendstat: Russia_Sunghir3.SG Russia_Kostenki14.SG -0.170
  267. gendstat: Russia_Sunghir3.SG Russia_MA1_HG.SG 0.688
  268. gendstat: Russia_Sunghir3.SG SATP 0.145
  269. gendstat: Russia_Sunghir3.SG Russia_DevilsCave_N.SG 0.819
  270. gendstat: Russia_Sunghir3.SG Papuan.DG -0.681
  271. gendstat: Russia_Sunghir3.SG Switzerland_Bichon.SG 1.400
  272. gendstat: Russia_Sunghir3.SG Natufian -0.425
  273. gendstat: Russia_Sunghir3.SG Tarim_EMBA1 -0.018
  274. gendstat: Russia_Sunghir3.SG Russia_Steppe_Eneolithic 0.663
  275. gendstat: Russia_Sunghir3.SG ONG.SG -0.062
  276. gendstat: Russia_Kostenki14.SG Russia_MA1_HG.SG 0.813
  277. gendstat: Russia_Kostenki14.SG SATP 0.303
  278. gendstat: Russia_Kostenki14.SG Russia_DevilsCave_N.SG 0.989
  279. gendstat: Russia_Kostenki14.SG Papuan.DG -0.492
  280. gendstat: Russia_Kostenki14.SG Switzerland_Bichon.SG 1.575
  281. gendstat: Russia_Kostenki14.SG Natufian -0.279
  282. gendstat: Russia_Kostenki14.SG Tarim_EMBA1 0.159
  283. gendstat: Russia_Kostenki14.SG Russia_Steppe_Eneolithic 0.848
  284. gendstat: Russia_Kostenki14.SG ONG.SG 0.124
  285. gendstat: Russia_MA1_HG.SG SATP -0.518
  286. gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG 0.030
  287. gendstat: Russia_MA1_HG.SG Papuan.DG -1.391
  288. gendstat: Russia_MA1_HG.SG Switzerland_Bichon.SG 0.606
  289. gendstat: Russia_MA1_HG.SG Natufian -1.012
  290. gendstat: Russia_MA1_HG.SG Tarim_EMBA1 -0.883
  291. gendstat: Russia_MA1_HG.SG Russia_Steppe_Eneolithic -0.130
  292. gendstat: Russia_MA1_HG.SG ONG.SG -0.837
  293. gendstat: SATP Russia_DevilsCave_N.SG 0.619
  294. gendstat: SATP Papuan.DG -0.814
  295. gendstat: SATP Switzerland_Bichon.SG 1.124
  296. gendstat: SATP Natufian -0.551
  297. gendstat: SATP Tarim_EMBA1 -0.185
  298. gendstat: SATP Russia_Steppe_Eneolithic 0.482
  299. gendstat: SATP ONG.SG -0.231
  300. gendstat: Russia_DevilsCave_N.SG Papuan.DG -1.965
  301. gendstat: Russia_DevilsCave_N.SG Switzerland_Bichon.SG 0.682
  302. gendstat: Russia_DevilsCave_N.SG Natufian -1.214
  303. gendstat: Russia_DevilsCave_N.SG Tarim_EMBA1 -1.004
  304. gendstat: Russia_DevilsCave_N.SG Russia_Steppe_Eneolithic -0.192
  305. gendstat: Russia_DevilsCave_N.SG ONG.SG -1.172
  306. gendstat: Papuan.DG Switzerland_Bichon.SG 2.215
  307. gendstat: Papuan.DG Natufian 0.105
  308. gendstat: Papuan.DG Tarim_EMBA1 0.761
  309. gendstat: Papuan.DG Russia_Steppe_Eneolithic 1.572
  310. gendstat: Papuan.DG ONG.SG 0.838
  311. gendstat: Switzerland_Bichon.SG Natufian -1.650
  312. gendstat: Switzerland_Bichon.SG Tarim_EMBA1 -1.504
  313. gendstat: Switzerland_Bichon.SG Russia_Steppe_Eneolithic -0.885
  314. gendstat: Switzerland_Bichon.SG ONG.SG -1.598
  315. gendstat: Natufian Tarim_EMBA1 0.438
  316. gendstat: Natufian Russia_Steppe_Eneolithic 1.089
  317. gendstat: Natufian ONG.SG 0.431
  318. gendstat: Tarim_EMBA1 Russia_Steppe_Eneolithic 0.897
  319. gendstat: Tarim_EMBA1 ONG.SG -0.050
  320. gendstat: Russia_Steppe_Eneolithic ONG.SG -0.874
  321.  
  322. ##end of qpAdm: 24.927 seconds cpu 1.597 Mbytes in use
  323.  
  324.  
  325. qpAdm: parameter file: parqpadm.txt
  326. ### THE INPUT PARAMETERS
  327. ##PARAMETER NAME: VALUE
  328. fstatsname: /home/vrts/host/vrts1240K/fstatsa.txt
  329. popleft: /home/vrts/host/vrts1240K/left.txt
  330. popright: /home/vrts/host/vrts1240K/right.txt
  331. details: YES
  332. ## qpAdm version: 1520
  333. seed: 1205766034
  334. *** recommended that inbreed be explicitly set ***
  335. inbreed set NO
  336.  
  337. left pops:
  338. Armenian.DG
  339. Turkey_N.SG
  340. Russia_Samara_EBA_Yamnaya
  341. CHG
  342. PPN
  343.  
  344. right pops:
  345. Mbuti.DG
  346. Russia_Ust_Ishim.DG
  347. China_Tianyuan
  348. Goyet_Neanderthal.SG
  349. Russia_Sunghir3.SG
  350. Russia_Kostenki14.SG
  351. Russia_MA1_HG.SG
  352. SATP
  353. Russia_DevilsCave_N.SG
  354. Papuan.DG
  355. Switzerland_Bichon.SG
  356. Natufian
  357. Tarim_EMBA1
  358. Russia_Steppe_Eneolithic
  359. ONG.SG
  360.  
  361. codimension 1
  362. f4info:
  363. f4rank: 3 dof: 11 chisq: 93.455 tail: 3.49711336e-15 dofdiff: 13 chisqdiff: -93.455 taildiff: 1
  364. B:
  365. scale 1.000 1.000 1.000
  366. Russia_Ust_Ishim.DG 0.337 0.115 0.890
  367. China_Tianyuan 0.531 0.393 -0.487
  368. Goyet_Neanderthal.SG 0.020 0.032 0.176
  369. Russia_Sunghir3.SG 0.367 0.377 1.007
  370. Russia_Kostenki14.SG 0.425 0.422 0.935
  371. Russia_MA1_HG.SG 1.458 1.030 -0.443
  372. SATP 1.299 -2.685 -1.047
  373. Russia_DevilsCave_N.SG 0.633 -0.001 0.270
  374. Papuan.DG 0.561 0.070 0.683
  375. Switzerland_Bichon.SG 0.668 1.179 1.361
  376. Natufian -1.529 1.395 -1.609
  377. Tarim_EMBA1 1.886 1.326 -1.204
  378. Russia_Steppe_Eneolithic 1.418 0.371 -1.284
  379. ONG.SG 0.637 0.058 1.295
  380. A:
  381. scale 373.804 678.267 1838.921
  382. Turkey_N.SG -0.563 0.293 0.578
  383. Russia_Samara_EBA_Yamnaya 1.225 1.074 -0.527
  384. CHG 0.554 -1.585 -1.263
  385. PPN -1.370 0.498 -1.339
  386.  
  387.  
  388. full rank
  389. f4info:
  390. f4rank: 4 dof: 0 chisq: 0.000 tail: 1 dofdiff: 11 chisqdiff: 93.455 taildiff: 3.49711336e-15
  391. B:
  392. scale 634.777 242.633 318.621 284.398
  393. Russia_Ust_Ishim.DG 0.103 0.330 -0.001 -0.478
  394. China_Tianyuan -0.288 0.627 0.117 -0.300
  395. Goyet_Neanderthal.SG 0.247 0.077 0.031 0.045
  396. Russia_Sunghir3.SG 0.842 0.623 -0.018 -0.292
  397. Russia_Kostenki14.SG 0.358 0.561 -0.164 -0.391
  398. Russia_MA1_HG.SG -0.610 1.728 0.210 -1.040
  399. SATP -1.220 0.365 3.408 -1.391
  400. Russia_DevilsCave_N.SG -0.248 0.582 0.365 -0.644
  401. Papuan.DG -0.705 0.313 -0.164 -0.795
  402. Switzerland_Bichon.SG 1.711 1.383 -0.034 -0.171
  403. Natufian 2.166 -0.341 -1.133 2.425
  404. Tarim_EMBA1 -1.423 2.170 0.251 -1.334
  405. Russia_Steppe_Eneolithic -0.906 1.521 0.888 -0.938
  406. ONG.SG -0.354 0.424 -0.045 -0.899
  407. A:
  408. scale 2.000 2.000 2.000 2.000
  409. Turkey_N.SG 2.000 0.000 0.000 0.000
  410. Russia_Samara_EBA_Yamnaya 0.000 2.000 0.000 0.000
  411. CHG 0.000 0.000 2.000 0.000
  412. PPN 0.000 0.000 0.000 2.000
  413.  
  414.  
  415. best coefficients: 0.618 0.169 0.225 -0.012
  416. totmean: 0.618 0.169 0.225 -0.012
  417. boot mean: 0.890 0.126 0.185 -0.201
  418. std. errors: 3.434 0.550 0.502 2.387
  419.  
  420. error covariance (* 1,000,000)
  421. 11790071 -1884090 -1712350 -8193630
  422. -1884090 302671 272059 1309361
  423. -1712350 272059 251919 1188372
  424. -8193630 1309361 1188372 5695897
  425.  
  426.  
  427. summ: Armenian.DG 4 0.000000 0.890 0.126 0.185 -0.201 11790071 -1884090 -1712350 -8193630 302671 ...
  428. 272059 1309361 251919 1188372 5695897
  429.  
  430. fixed pat wt dof chisq tail prob
  431. 0000 0 11 93.455 3.49711e-15 0.618 0.169 0.225 -0.012 infeasible
  432. 0001 1 12 94.335 7.11082e-15 0.600 0.173 0.228 0.000
  433. 0010 1 12 123.738 1.10842e-20 1.514 0.089 0.000 -0.602 infeasible
  434. 0100 1 12 112.888 1.60328e-18 1.173 0.000 0.202 -0.375 infeasible
  435. 1000 1 12 127.794 1.70963e-21 0.000 0.263 0.329 0.408
  436. 0011 2 13 165.132 1.7977e-28 0.738 0.262 0.000 0.000
  437. 0101 2 13 133.125 4.98422e-22 0.668 0.000 0.332 0.000
  438. 0110 2 13 125.885 1.37543e-20 1.795 0.000 0.000 -0.795 infeasible
  439. 1001 2 13 398.107 0 0.000 -0.034 1.034 0.000 infeasible
  440. 1010 2 13 289.888 0 0.000 0.474 0.000 0.526
  441. 1100 2 13 205.598 0 0.000 0.000 0.584 0.416
  442. 0111 3 14 260.071 0 1.000 0.000 0.000 0.000
  443. 1011 3 14 1030.927 0 0.000 1.000 0.000 0.000
  444. 1101 3 14 396.914 0 0.000 0.000 1.000 0.000
  445. 1110 3 14 742.137 0 0.000 0.000 0.000 1.000
  446. best pat: 0000 3.49711e-15 - -
  447. best pat: 1000 1.70963e-21 chi(nested): 34.339 p-value for nested model: 4.62963e-09
  448. best pat: 0101 4.98422e-22 not nested
  449. best pat: 0111 2.36432e-47 chi(nested): 126.946 p-value for nested model: 1.90933e-29
  450.  
  451. coeffs: 0.618 0.169 0.225 -0.012
  452.  
  453. ## dscore:: f_4(Base, Fit, Rbase, right2)
  454. ## genstat:: f_4(Base, Fit, right1, right2)
  455.  
  456. details: Turkey_N.SG Russia_Ust_Ishim.DG 0.000163 0.434389
  457. details: Russia_Samara_EBA_Yamnaya Russia_Ust_Ishim.DG 0.001359 3.787834
  458. details: CHG Russia_Ust_Ishim.DG -0.000004 -0.008204
  459. details: PPN Russia_Ust_Ishim.DG -0.001679 -4.108688
  460. dscore: Russia_Ust_Ishim.DG f4: 0.000349 Z: 1.059646
  461.  
  462. details: Turkey_N.SG China_Tianyuan -0.000454 -1.084074
  463. details: Russia_Samara_EBA_Yamnaya China_Tianyuan 0.002584 6.726839
  464. details: CHG China_Tianyuan 0.000369 0.660917
  465. details: PPN China_Tianyuan -0.001055 -2.515220
  466. dscore: China_Tianyuan f4: 0.000251 Z: 0.689411
  467.  
  468. details: Turkey_N.SG Goyet_Neanderthal.SG 0.000389 1.420385
  469. details: Russia_Samara_EBA_Yamnaya Goyet_Neanderthal.SG 0.000318 1.238925
  470. details: CHG Goyet_Neanderthal.SG 0.000098 0.265263
  471. details: PPN Goyet_Neanderthal.SG 0.000158 0.525163
  472. dscore: Goyet_Neanderthal.SG f4: 0.000314 Z: 1.314062
  473.  
  474. details: Turkey_N.SG Russia_Sunghir3.SG 0.001326 2.841951
  475. details: Russia_Samara_EBA_Yamnaya Russia_Sunghir3.SG 0.002569 6.320022
  476. details: CHG Russia_Sunghir3.SG -0.000056 -0.102016
  477. details: PPN Russia_Sunghir3.SG -0.001025 -2.311818
  478. dscore: Russia_Sunghir3.SG f4: 0.001253 Z: 3.191379
  479.  
  480. details: Turkey_N.SG Russia_Kostenki14.SG 0.000563 1.320054
  481. details: Russia_Samara_EBA_Yamnaya Russia_Kostenki14.SG 0.002311 6.068789
  482. details: CHG Russia_Kostenki14.SG -0.000514 -0.869739
  483. details: PPN Russia_Kostenki14.SG -0.001374 -3.175391
  484. dscore: Russia_Kostenki14.SG f4: 0.000639 Z: 1.680840
  485.  
  486. details: Turkey_N.SG Russia_MA1_HG.SG -0.000961 -2.019970
  487. details: Russia_Samara_EBA_Yamnaya Russia_MA1_HG.SG 0.007124 16.343685
  488. details: CHG Russia_MA1_HG.SG 0.000660 1.085688
  489. details: PPN Russia_MA1_HG.SG -0.003656 -8.237562
  490. dscore: Russia_MA1_HG.SG f4: 0.000801 Z: 1.967051
  491.  
  492. details: Turkey_N.SG SATP -0.001922 -4.266491
  493. details: Russia_Samara_EBA_Yamnaya SATP 0.001505 3.641787
  494. details: CHG SATP 0.010697 15.807081
  495. details: PPN SATP -0.004893 -10.946503
  496. dscore: SATP f4: 0.001532 Z: 3.848871
  497.  
  498. details: Turkey_N.SG Russia_DevilsCave_N.SG -0.000390 -1.094834
  499. details: Russia_Samara_EBA_Yamnaya Russia_DevilsCave_N.SG 0.002400 7.580275
  500. details: CHG Russia_DevilsCave_N.SG 0.001146 2.445495
  501. details: PPN Russia_DevilsCave_N.SG -0.002265 -6.321461
  502. dscore: Russia_DevilsCave_N.SG f4: 0.000449 Z: 1.465963
  503.  
  504. details: Turkey_N.SG Papuan.DG -0.001111 -3.293950
  505. details: Russia_Samara_EBA_Yamnaya Papuan.DG 0.001292 4.231097
  506. details: CHG Papuan.DG -0.000514 -1.206045
  507. details: PPN Papuan.DG -0.002796 -8.285930
  508. dscore: Papuan.DG f4: -0.000551 Z: -1.906851
  509.  
  510. details: Turkey_N.SG Switzerland_Bichon.SG 0.002695 6.087952
  511. details: Russia_Samara_EBA_Yamnaya Switzerland_Bichon.SG 0.005701 13.650713
  512. details: CHG Switzerland_Bichon.SG -0.000106 -0.178258
  513. details: PPN Switzerland_Bichon.SG -0.000600 -1.289689
  514. dscore: Switzerland_Bichon.SG f4: 0.002612 Z: 6.690042
  515.  
  516. details: Turkey_N.SG Natufian 0.003412 6.991054
  517. details: Russia_Samara_EBA_Yamnaya Natufian -0.001404 -3.295998
  518. details: CHG Natufian -0.003556 -5.561166
  519. details: PPN Natufian 0.008528 16.574614
  520. dscore: Natufian f4: 0.000970 Z: 2.317616
  521.  
  522. details: Turkey_N.SG Tarim_EMBA1 -0.002241 -6.026560
  523. details: Russia_Samara_EBA_Yamnaya Tarim_EMBA1 0.008942 24.700700
  524. details: CHG Tarim_EMBA1 0.000788 1.643437
  525. details: PPN Tarim_EMBA1 -0.004691 -12.411249
  526. dscore: Tarim_EMBA1 f4: 0.000358 Z: 1.106492
  527.  
  528. details: Turkey_N.SG Russia_Steppe_Eneolithic -0.001427 -4.076320
  529. details: Russia_Samara_EBA_Yamnaya Russia_Steppe_Eneolithic 0.006270 19.961740
  530. details: CHG Russia_Steppe_Eneolithic 0.002785 6.075670
  531. details: PPN Russia_Steppe_Eneolithic -0.003298 -9.508693
  532. dscore: Russia_Steppe_Eneolithic f4: 0.000843 Z: 2.775576
  533.  
  534. details: Turkey_N.SG ONG.SG -0.000557 -1.682404
  535. details: Russia_Samara_EBA_Yamnaya ONG.SG 0.001748 5.850180
  536. details: CHG ONG.SG -0.000140 -0.326789
  537. details: PPN ONG.SG -0.003160 -9.738555
  538. dscore: ONG.SG f4: -0.000043 Z: -0.152721
  539.  
  540. gendstat: Mbuti.DG Russia_Ust_Ishim.DG 1.060
  541. gendstat: Mbuti.DG China_Tianyuan 0.689
  542. gendstat: Mbuti.DG Goyet_Neanderthal.SG 1.314
  543. gendstat: Mbuti.DG Russia_Sunghir3.SG 3.191
  544. gendstat: Mbuti.DG Russia_Kostenki14.SG 1.681
  545. gendstat: Mbuti.DG Russia_MA1_HG.SG 1.967
  546. gendstat: Mbuti.DG SATP 3.849
  547. gendstat: Mbuti.DG Russia_DevilsCave_N.SG 1.466
  548. gendstat: Mbuti.DG Papuan.DG -1.907
  549. gendstat: Mbuti.DG Switzerland_Bichon.SG 6.690
  550. gendstat: Mbuti.DG Natufian 2.318
  551. gendstat: Mbuti.DG Tarim_EMBA1 1.106
  552. gendstat: Mbuti.DG Russia_Steppe_Eneolithic 2.776
  553. gendstat: Mbuti.DG ONG.SG -0.153
  554. gendstat: Russia_Ust_Ishim.DG China_Tianyuan -0.249
  555. gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG -0.089
  556. gendstat: Russia_Ust_Ishim.DG Russia_Sunghir3.SG 2.218
  557. gendstat: Russia_Ust_Ishim.DG Russia_Kostenki14.SG 0.694
  558. gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG 1.066
  559. gendstat: Russia_Ust_Ishim.DG SATP 2.669
  560. gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG 0.284
  561. gendstat: Russia_Ust_Ishim.DG Papuan.DG -2.597
  562. gendstat: Russia_Ust_Ishim.DG Switzerland_Bichon.SG 5.522
  563. gendstat: Russia_Ust_Ishim.DG Natufian 1.349
  564. gendstat: Russia_Ust_Ishim.DG Tarim_EMBA1 0.027
  565. gendstat: Russia_Ust_Ishim.DG Russia_Steppe_Eneolithic 1.438
  566. gendstat: Russia_Ust_Ishim.DG ONG.SG -1.183
  567. gendstat: China_Tianyuan Goyet_Neanderthal.SG 0.148
  568. gendstat: China_Tianyuan Russia_Sunghir3.SG 2.332
  569. gendstat: China_Tianyuan Russia_Kostenki14.SG 0.917
  570. gendstat: China_Tianyuan Russia_MA1_HG.SG 1.271
  571. gendstat: China_Tianyuan SATP 2.928
  572. gendstat: China_Tianyuan Russia_DevilsCave_N.SG 0.561
  573. gendstat: China_Tianyuan Papuan.DG -2.352
  574. gendstat: China_Tianyuan Switzerland_Bichon.SG 5.640
  575. gendstat: China_Tianyuan Natufian 1.514
  576. gendstat: China_Tianyuan Tarim_EMBA1 0.293
  577. gendstat: China_Tianyuan Russia_Steppe_Eneolithic 1.601
  578. gendstat: China_Tianyuan ONG.SG -0.849
  579. gendstat: Goyet_Neanderthal.SG Russia_Sunghir3.SG 2.142
  580. gendstat: Goyet_Neanderthal.SG Russia_Kostenki14.SG 0.732
  581. gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG 1.044
  582. gendstat: Goyet_Neanderthal.SG SATP 2.722
  583. gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG 0.360
  584. gendstat: Goyet_Neanderthal.SG Papuan.DG -2.338
  585. gendstat: Goyet_Neanderthal.SG Switzerland_Bichon.SG 5.130
  586. gendstat: Goyet_Neanderthal.SG Natufian 1.395
  587. gendstat: Goyet_Neanderthal.SG Tarim_EMBA1 0.112
  588. gendstat: Goyet_Neanderthal.SG Russia_Steppe_Eneolithic 1.417
  589. gendstat: Goyet_Neanderthal.SG ONG.SG -0.992
  590. gendstat: Russia_Sunghir3.SG Russia_Kostenki14.SG -1.518
  591. gendstat: Russia_Sunghir3.SG Russia_MA1_HG.SG -1.022
  592. gendstat: Russia_Sunghir3.SG SATP 0.587
  593. gendstat: Russia_Sunghir3.SG Russia_DevilsCave_N.SG -2.103
  594. gendstat: Russia_Sunghir3.SG Papuan.DG -4.921
  595. gendstat: Russia_Sunghir3.SG Switzerland_Bichon.SG 3.207
  596. gendstat: Russia_Sunghir3.SG Natufian -0.575
  597. gendstat: Russia_Sunghir3.SG Tarim_EMBA1 -2.260
  598. gendstat: Russia_Sunghir3.SG Russia_Steppe_Eneolithic -1.061
  599. gendstat: Russia_Sunghir3.SG ONG.SG -3.486
  600. gendstat: Russia_Kostenki14.SG Russia_MA1_HG.SG 0.354
  601. gendstat: Russia_Kostenki14.SG SATP 1.974
  602. gendstat: Russia_Kostenki14.SG Russia_DevilsCave_N.SG -0.502
  603. gendstat: Russia_Kostenki14.SG Papuan.DG -3.203
  604. gendstat: Russia_Kostenki14.SG Switzerland_Bichon.SG 4.813
  605. gendstat: Russia_Kostenki14.SG Natufian 0.696
  606. gendstat: Russia_Kostenki14.SG Tarim_EMBA1 -0.732
  607. gendstat: Russia_Kostenki14.SG Russia_Steppe_Eneolithic 0.536
  608. gendstat: Russia_Kostenki14.SG ONG.SG -1.819
  609. gendstat: Russia_MA1_HG.SG SATP 1.584
  610. gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG -0.895
  611. gendstat: Russia_MA1_HG.SG Papuan.DG -3.431
  612. gendstat: Russia_MA1_HG.SG Switzerland_Bichon.SG 3.952
  613. gendstat: Russia_MA1_HG.SG Natufian 0.335
  614. gendstat: Russia_MA1_HG.SG Tarim_EMBA1 -1.252
  615. gendstat: Russia_MA1_HG.SG Russia_Steppe_Eneolithic 0.112
  616. gendstat: Russia_MA1_HG.SG ONG.SG -2.201
  617. gendstat: SATP Russia_DevilsCave_N.SG -2.769
  618. gendstat: SATP Papuan.DG -5.340
  619. gendstat: SATP Switzerland_Bichon.SG 2.416
  620. gendstat: SATP Natufian -1.147
  621. gendstat: SATP Tarim_EMBA1 -2.858
  622. gendstat: SATP Russia_Steppe_Eneolithic -1.814
  623. gendstat: SATP ONG.SG -4.002
  624. gendstat: Russia_DevilsCave_N.SG Papuan.DG -3.670
  625. gendstat: Russia_DevilsCave_N.SG Switzerland_Bichon.SG 5.800
  626. gendstat: Russia_DevilsCave_N.SG Natufian 1.221
  627. gendstat: Russia_DevilsCave_N.SG Tarim_EMBA1 -0.296
  628. gendstat: Russia_DevilsCave_N.SG Russia_Steppe_Eneolithic 1.266
  629. gendstat: Russia_DevilsCave_N.SG ONG.SG -1.765
  630. gendstat: Papuan.DG Switzerland_Bichon.SG 8.381
  631. gendstat: Papuan.DG Natufian 3.563
  632. gendstat: Papuan.DG Tarim_EMBA1 2.850
  633. gendstat: Papuan.DG Russia_Steppe_Eneolithic 4.527
  634. gendstat: Papuan.DG ONG.SG 1.906
  635. gendstat: Switzerland_Bichon.SG Natufian -3.405
  636. gendstat: Switzerland_Bichon.SG Tarim_EMBA1 -5.959
  637. gendstat: Switzerland_Bichon.SG Russia_Steppe_Eneolithic -5.007
  638. gendstat: Switzerland_Bichon.SG ONG.SG -6.943
  639. gendstat: Natufian Tarim_EMBA1 -1.368
  640. gendstat: Natufian Russia_Steppe_Eneolithic -0.298
  641. gendstat: Natufian ONG.SG -2.383
  642. gendstat: Tarim_EMBA1 Russia_Steppe_Eneolithic 1.682
  643. gendstat: Tarim_EMBA1 ONG.SG -1.273
  644. gendstat: Russia_Steppe_Eneolithic ONG.SG -2.830
  645.  
  646. ##end of qpAdm: 24.836 seconds cpu 1.597 Mbytes in use
  647.  
  648.  
  649. qpAdm: parameter file: parqpadm.txt
  650. ### THE INPUT PARAMETERS
  651. ##PARAMETER NAME: VALUE
  652. fstatsname: /home/vrts/host/vrts1240K/fstatsa.txt
  653. popleft: /home/vrts/host/vrts1240K/left.txt
  654. popright: /home/vrts/host/vrts1240K/right.txt
  655. details: YES
  656. ## qpAdm version: 1520
  657. seed: 1205314625
  658. *** recommended that inbreed be explicitly set ***
  659. inbreed set NO
  660.  
  661. left pops:
  662. Armenian.DG
  663. Turkey_N.SG
  664. Russia_Samara_EBA_Yamnaya
  665. Iran_N
  666. PPN
  667.  
  668. right pops:
  669. Mbuti.DG
  670. Russia_Ust_Ishim.DG
  671. China_Tianyuan
  672. Goyet_Neanderthal.SG
  673. Russia_Sunghir3.SG
  674. Russia_Kostenki14.SG
  675. Russia_MA1_HG.SG
  676. SATP
  677. Russia_DevilsCave_N.SG
  678. Papuan.DG
  679. Switzerland_Bichon.SG
  680. Natufian
  681. Tarim_EMBA1
  682. Russia_Steppe_Eneolithic
  683. ONG.SG
  684.  
  685. codimension 1
  686. f4info:
  687. f4rank: 3 dof: 11 chisq: 18.437 tail: 0.0719695076 dofdiff: 13 chisqdiff: -18.437 taildiff: 1
  688. B:
  689. scale 1.000 1.000 1.000
  690. Russia_Ust_Ishim.DG 0.392 0.072 0.715
  691. China_Tianyuan 0.548 0.016 -0.663
  692. Goyet_Neanderthal.SG 0.030 0.164 0.136
  693. Russia_Sunghir3.SG 0.489 1.016 1.243
  694. Russia_Kostenki14.SG 0.507 0.630 0.776
  695. Russia_MA1_HG.SG 1.583 0.333 -1.034
  696. SATP 0.850 -0.836 0.508
  697. Russia_DevilsCave_N.SG 0.645 -0.032 0.220
  698. Papuan.DG 0.550 -0.291 0.251
  699. Switzerland_Bichon.SG 0.898 1.772 1.318
  700. Natufian -1.272 2.893 -0.393
  701. Tarim_EMBA1 2.054 0.221 -2.231
  702. Russia_Steppe_Eneolithic 1.425 0.186 -1.388
  703. ONG.SG 0.655 -0.222 0.810
  704. A:
  705. scale 396.491 682.695 1894.294
  706. Turkey_N.SG -0.176 0.898 1.043
  707. Russia_Samara_EBA_Yamnaya 1.586 0.962 -0.672
  708. Iran_N -0.169 -0.969 -0.908
  709. PPN -1.194 1.153 -1.279
  710.  
  711.  
  712. full rank
  713. f4info:
  714. f4rank: 4 dof: 0 chisq: 0.000 tail: 1 dofdiff: 11 chisqdiff: 18.437 taildiff: 0.0719695076
  715. B:
  716. scale 634.777 242.633 549.353 284.398
  717. Russia_Ust_Ishim.DG 0.103 0.330 -0.454 -0.478
  718. China_Tianyuan -0.288 0.627 0.104 -0.300
  719. Goyet_Neanderthal.SG 0.247 0.077 -0.119 0.045
  720. Russia_Sunghir3.SG 0.842 0.623 -1.547 -0.292
  721. Russia_Kostenki14.SG 0.358 0.561 -1.173 -0.391
  722. Russia_MA1_HG.SG -0.610 1.728 -0.512 -1.040
  723. SATP -1.220 0.365 -0.164 -1.391
  724. Russia_DevilsCave_N.SG -0.248 0.582 -0.305 -0.644
  725. Papuan.DG -0.705 0.313 -0.385 -0.795
  726. Switzerland_Bichon.SG 1.711 1.383 -1.934 -0.171
  727. Natufian 2.166 -0.341 -2.284 2.425
  728. Tarim_EMBA1 -1.423 2.170 -0.406 -1.334
  729. Russia_Steppe_Eneolithic -0.906 1.521 -0.335 -0.938
  730. ONG.SG -0.354 0.424 -0.481 -0.899
  731. A:
  732. scale 2.000 2.000 2.000 2.000
  733. Turkey_N.SG 2.000 0.000 0.000 0.000
  734. Russia_Samara_EBA_Yamnaya 0.000 2.000 0.000 0.000
  735. Iran_N 0.000 0.000 2.000 0.000
  736. PPN 0.000 0.000 0.000 2.000
  737.  
  738.  
  739. best coefficients: 0.451 0.087 0.481 -0.019
  740. totmean: 0.451 0.087 0.481 -0.019
  741. boot mean: 0.453 0.087 0.482 -0.021
  742. std. errors: 0.090 0.030 0.039 0.062
  743.  
  744. error covariance (* 1,000,000)
  745. 8058 -1362 -1536 -5160
  746. -1362 924 -463 901
  747. -1536 -463 1528 471
  748. -5160 901 471 3788
  749.  
  750.  
  751. summ: Armenian.DG 4 0.071970 0.453 0.087 0.482 -0.021 8058 -1362 -1536 -5160 924 ...
  752. -463 901 1528 471 3788
  753.  
  754. fixed pat wt dof chisq tail prob
  755. 0000 0 11 18.437 0.0719695 0.451 0.087 0.481 -0.019 infeasible
  756. 0001 1 12 20.134 0.0645917 0.424 0.092 0.484 0.000
  757. 0010 1 12 123.941 1.00992e-20 1.472 0.099 0.000 -0.571 infeasible
  758. 0100 1 12 26.454 0.00925177 0.555 0.000 0.535 -0.090 infeasible
  759. 1000 1 12 53.320 3.61314e-07 0.000 0.159 0.575 0.265
  760. 0011 2 13 164.751 2.1477e-28 0.740 0.260 0.000 0.000
  761. 0101 2 13 32.797 0.00182797 0.436 0.000 0.564 0.000
  762. 0110 2 13 126.393 1.09034e-20 1.794 0.000 0.000 -0.794 infeasible
  763. 1001 2 13 164.305 2.64588e-28 0.000 0.089 0.911 0.000
  764. 1010 2 13 290.030 0 0.000 0.473 0.000 0.527
  765. 1100 2 13 85.591 9.67875e-13 0.000 0.000 0.753 0.247
  766. 0111 3 14 260.710 0 1.000 0.000 0.000 0.000
  767. 1011 3 14 1033.668 0 0.000 1.000 0.000 0.000
  768. 1101 3 14 170.717 4.9043e-29 0.000 0.000 1.000 0.000
  769. 1110 3 14 742.626 0 0.000 0.000 0.000 1.000
  770. best pat: 0000 0.0719695 - -
  771. best pat: 1000 3.61314e-07 chi(nested): 34.882 p-value for nested model: 3.50224e-09
  772. best pat: 0101 0.00182797 not nested
  773. best pat: 1101 4.9043e-29 chi(nested): 137.921 p-value for nested model: 7.58366e-32
  774.  
  775. coeffs: 0.451 0.087 0.481 -0.019
  776.  
  777. ## dscore:: f_4(Base, Fit, Rbase, right2)
  778. ## genstat:: f_4(Base, Fit, right1, right2)
  779.  
  780. details: Turkey_N.SG Russia_Ust_Ishim.DG 0.000163 0.434389
  781. details: Russia_Samara_EBA_Yamnaya Russia_Ust_Ishim.DG 0.001359 3.787834
  782. details: Iran_N Russia_Ust_Ishim.DG -0.000827 -2.141866
  783. details: PPN Russia_Ust_Ishim.DG -0.001679 -4.108688
  784. dscore: Russia_Ust_Ishim.DG f4: -0.000174 Z: -0.542532
  785.  
  786. details: Turkey_N.SG China_Tianyuan -0.000454 -1.084074
  787. details: Russia_Samara_EBA_Yamnaya China_Tianyuan 0.002584 6.726839
  788. details: Iran_N China_Tianyuan 0.000189 0.449878
  789. details: PPN China_Tianyuan -0.001055 -2.515220
  790. dscore: China_Tianyuan f4: 0.000131 Z: 0.365841
  791.  
  792. details: Turkey_N.SG Goyet_Neanderthal.SG 0.000389 1.420385
  793. details: Russia_Samara_EBA_Yamnaya Goyet_Neanderthal.SG 0.000318 1.238925
  794. details: Iran_N Goyet_Neanderthal.SG -0.000216 -0.739497
  795. details: PPN Goyet_Neanderthal.SG 0.000158 0.525163
  796. dscore: Goyet_Neanderthal.SG f4: 0.000096 Z: 0.416492
  797.  
  798. details: Turkey_N.SG Russia_Sunghir3.SG 0.001326 2.841951
  799. details: Russia_Samara_EBA_Yamnaya Russia_Sunghir3.SG 0.002569 6.320022
  800. details: Iran_N Russia_Sunghir3.SG -0.002817 -6.277040
  801. details: PPN Russia_Sunghir3.SG -0.001025 -2.311818
  802. dscore: Russia_Sunghir3.SG f4: -0.000515 Z: -1.331701
  803.  
  804. details: Turkey_N.SG Russia_Kostenki14.SG 0.000563 1.320054
  805. details: Russia_Samara_EBA_Yamnaya Russia_Kostenki14.SG 0.002311 6.068789
  806. details: Iran_N Russia_Kostenki14.SG -0.002135 -4.742482
  807. details: PPN Russia_Kostenki14.SG -0.001374 -3.175391
  808. dscore: Russia_Kostenki14.SG f4: -0.000546 Z: -1.458452
  809.  
  810. details: Turkey_N.SG Russia_MA1_HG.SG -0.000961 -2.019970
  811. details: Russia_Samara_EBA_Yamnaya Russia_MA1_HG.SG 0.007124 16.343685
  812. details: Iran_N Russia_MA1_HG.SG -0.000932 -1.906630
  813. details: PPN Russia_MA1_HG.SG -0.003656 -8.237562
  814. dscore: Russia_MA1_HG.SG f4: -0.000193 Z: -0.467856
  815.  
  816. details: Turkey_N.SG SATP -0.001922 -4.266491
  817. details: Russia_Samara_EBA_Yamnaya SATP 0.001505 3.641787
  818. details: Iran_N SATP -0.000299 -0.643657
  819. details: PPN SATP -0.004893 -10.946503
  820. dscore: SATP f4: -0.000786 Z: -2.019744
  821.  
  822. details: Turkey_N.SG Russia_DevilsCave_N.SG -0.000390 -1.094834
  823. details: Russia_Samara_EBA_Yamnaya Russia_DevilsCave_N.SG 0.002400 7.580275
  824. details: Iran_N Russia_DevilsCave_N.SG -0.000556 -1.475917
  825. details: PPN Russia_DevilsCave_N.SG -0.002265 -6.321461
  826. dscore: Russia_DevilsCave_N.SG f4: -0.000191 Z: -0.620172
  827.  
  828. details: Turkey_N.SG Papuan.DG -0.001111 -3.293950
  829. details: Russia_Samara_EBA_Yamnaya Papuan.DG 0.001292 4.231097
  830. details: Iran_N Papuan.DG -0.000701 -2.057642
  831. details: PPN Papuan.DG -0.002796 -8.285930
  832. dscore: Papuan.DG f4: -0.000673 Z: -2.308386
  833.  
  834. details: Turkey_N.SG Switzerland_Bichon.SG 0.002695 6.087952
  835. details: Russia_Samara_EBA_Yamnaya Switzerland_Bichon.SG 0.005701 13.650713
  836. details: Iran_N Switzerland_Bichon.SG -0.003521 -8.132123
  837. details: PPN Switzerland_Bichon.SG -0.000600 -1.289689
  838. dscore: Switzerland_Bichon.SG f4: 0.000028 Z: 0.073978
  839.  
  840. details: Turkey_N.SG Natufian 0.003412 6.991054
  841. details: Russia_Samara_EBA_Yamnaya Natufian -0.001404 -3.295998
  842. details: Iran_N Natufian -0.004158 -8.848940
  843. details: PPN Natufian 0.008528 16.574614
  844. dscore: Natufian f4: -0.000748 Z: -1.882175
  845.  
  846. details: Turkey_N.SG Tarim_EMBA1 -0.002241 -6.026560
  847. details: Russia_Samara_EBA_Yamnaya Tarim_EMBA1 0.008942 24.700700
  848. details: Iran_N Tarim_EMBA1 -0.000739 -1.808180
  849. details: PPN Tarim_EMBA1 -0.004691 -12.411249
  850. dscore: Tarim_EMBA1 f4: -0.000500 Z: -1.487689
  851.  
  852. details: Turkey_N.SG Russia_Steppe_Eneolithic -0.001427 -4.076320
  853. details: Russia_Samara_EBA_Yamnaya Russia_Steppe_Eneolithic 0.006270 19.961740
  854. details: Iran_N Russia_Steppe_Eneolithic -0.000611 -1.704156
  855. details: PPN Russia_Steppe_Eneolithic -0.003298 -9.508693
  856. dscore: Russia_Steppe_Eneolithic f4: -0.000330 Z: -1.091145
  857.  
  858. details: Turkey_N.SG ONG.SG -0.000557 -1.682404
  859. details: Russia_Samara_EBA_Yamnaya ONG.SG 0.001748 5.850180
  860. details: Iran_N ONG.SG -0.000875 -2.614293
  861. details: PPN ONG.SG -0.003160 -9.738555
  862. dscore: ONG.SG f4: -0.000460 Z: -1.657280
  863.  
  864. gendstat: Mbuti.DG Russia_Ust_Ishim.DG -0.543
  865. gendstat: Mbuti.DG China_Tianyuan 0.366
  866. gendstat: Mbuti.DG Goyet_Neanderthal.SG 0.416
  867. gendstat: Mbuti.DG Russia_Sunghir3.SG -1.332
  868. gendstat: Mbuti.DG Russia_Kostenki14.SG -1.458
  869. gendstat: Mbuti.DG Russia_MA1_HG.SG -0.468
  870. gendstat: Mbuti.DG SATP -2.020
  871. gendstat: Mbuti.DG Russia_DevilsCave_N.SG -0.620
  872. gendstat: Mbuti.DG Papuan.DG -2.308
  873. gendstat: Mbuti.DG Switzerland_Bichon.SG 0.074
  874. gendstat: Mbuti.DG Natufian -1.882
  875. gendstat: Mbuti.DG Tarim_EMBA1 -1.488
  876. gendstat: Mbuti.DG Russia_Steppe_Eneolithic -1.091
  877. gendstat: Mbuti.DG ONG.SG -1.657
  878. gendstat: Russia_Ust_Ishim.DG China_Tianyuan 0.822
  879. gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG 0.700
  880. gendstat: Russia_Ust_Ishim.DG Russia_Sunghir3.SG -0.853
  881. gendstat: Russia_Ust_Ishim.DG Russia_Kostenki14.SG -0.911
  882. gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG -0.045
  883. gendstat: Russia_Ust_Ishim.DG SATP -1.448
  884. gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG -0.051
  885. gendstat: Russia_Ust_Ishim.DG Papuan.DG -1.490
  886. gendstat: Russia_Ust_Ishim.DG Switzerland_Bichon.SG 0.519
  887. gendstat: Russia_Ust_Ishim.DG Natufian -1.305
  888. gendstat: Russia_Ust_Ishim.DG Tarim_EMBA1 -0.952
  889. gendstat: Russia_Ust_Ishim.DG Russia_Steppe_Eneolithic -0.464
  890. gendstat: Russia_Ust_Ishim.DG ONG.SG -0.902
  891. gendstat: China_Tianyuan Goyet_Neanderthal.SG -0.084
  892. gendstat: China_Tianyuan Russia_Sunghir3.SG -1.602
  893. gendstat: China_Tianyuan Russia_Kostenki14.SG -1.641
  894. gendstat: China_Tianyuan Russia_MA1_HG.SG -0.771
  895. gendstat: China_Tianyuan SATP -2.150
  896. gendstat: China_Tianyuan Russia_DevilsCave_N.SG -0.948
  897. gendstat: China_Tianyuan Papuan.DG -2.446
  898. gendstat: China_Tianyuan Switzerland_Bichon.SG -0.258
  899. gendstat: China_Tianyuan Natufian -1.964
  900. gendstat: China_Tianyuan Tarim_EMBA1 -1.791
  901. gendstat: China_Tianyuan Russia_Steppe_Eneolithic -1.285
  902. gendstat: China_Tianyuan ONG.SG -1.759
  903. gendstat: Goyet_Neanderthal.SG Russia_Sunghir3.SG -1.422
  904. gendstat: Goyet_Neanderthal.SG Russia_Kostenki14.SG -1.463
  905. gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG -0.620
  906. gendstat: Goyet_Neanderthal.SG SATP -1.979
  907. gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG -0.762
  908. gendstat: Goyet_Neanderthal.SG Papuan.DG -2.046
  909. gendstat: Goyet_Neanderthal.SG Switzerland_Bichon.SG -0.157
  910. gendstat: Goyet_Neanderthal.SG Natufian -1.907
  911. gendstat: Goyet_Neanderthal.SG Tarim_EMBA1 -1.492
  912. gendstat: Goyet_Neanderthal.SG Russia_Steppe_Eneolithic -1.149
  913. gendstat: Goyet_Neanderthal.SG ONG.SG -1.559
  914. gendstat: Russia_Sunghir3.SG Russia_Kostenki14.SG -0.080
  915. gendstat: Russia_Sunghir3.SG Russia_MA1_HG.SG 0.751
  916. gendstat: Russia_Sunghir3.SG SATP -0.586
  917. gendstat: Russia_Sunghir3.SG Russia_DevilsCave_N.SG 0.863
  918. gendstat: Russia_Sunghir3.SG Papuan.DG -0.445
  919. gendstat: Russia_Sunghir3.SG Switzerland_Bichon.SG 1.363
  920. gendstat: Russia_Sunghir3.SG Natufian -0.497
  921. gendstat: Russia_Sunghir3.SG Tarim_EMBA1 0.039
  922. gendstat: Russia_Sunghir3.SG Russia_Steppe_Eneolithic 0.496
  923. gendstat: Russia_Sunghir3.SG ONG.SG 0.151
  924. gendstat: Russia_Kostenki14.SG Russia_MA1_HG.SG 0.795
  925. gendstat: Russia_Kostenki14.SG SATP -0.545
  926. gendstat: Russia_Kostenki14.SG Russia_DevilsCave_N.SG 0.941
  927. gendstat: Russia_Kostenki14.SG Papuan.DG -0.357
  928. gendstat: Russia_Kostenki14.SG Switzerland_Bichon.SG 1.447
  929. gendstat: Russia_Kostenki14.SG Natufian -0.425
  930. gendstat: Russia_Kostenki14.SG Tarim_EMBA1 0.122
  931. gendstat: Russia_Kostenki14.SG Russia_Steppe_Eneolithic 0.588
  932. gendstat: Russia_Kostenki14.SG ONG.SG 0.242
  933. gendstat: Russia_MA1_HG.SG SATP -1.352
  934. gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG 0.004
  935. gendstat: Russia_MA1_HG.SG Papuan.DG -1.241
  936. gendstat: Russia_MA1_HG.SG Switzerland_Bichon.SG 0.506
  937. gendstat: Russia_MA1_HG.SG Natufian -1.134
  938. gendstat: Russia_MA1_HG.SG Tarim_EMBA1 -0.901
  939. gendstat: Russia_MA1_HG.SG Russia_Steppe_Eneolithic -0.373
  940. gendstat: Russia_MA1_HG.SG ONG.SG -0.704
  941. gendstat: SATP Russia_DevilsCave_N.SG 1.532
  942. gendstat: SATP Papuan.DG 0.299
  943. gendstat: SATP Switzerland_Bichon.SG 1.853
  944. gendstat: SATP Natufian 0.079
  945. gendstat: SATP Tarim_EMBA1 0.720
  946. gendstat: SATP Russia_Steppe_Eneolithic 1.223
  947. gendstat: SATP ONG.SG 0.845
  948. gendstat: Russia_DevilsCave_N.SG Papuan.DG -1.725
  949. gendstat: Russia_DevilsCave_N.SG Switzerland_Bichon.SG 0.592
  950. gendstat: Russia_DevilsCave_N.SG Natufian -1.334
  951. gendstat: Russia_DevilsCave_N.SG Tarim_EMBA1 -0.989
  952. gendstat: Russia_DevilsCave_N.SG Russia_Steppe_Eneolithic -0.446
  953. gendstat: Russia_DevilsCave_N.SG ONG.SG -0.959
  954. gendstat: Papuan.DG Switzerland_Bichon.SG 1.947
  955. gendstat: Papuan.DG Natufian -0.184
  956. gendstat: Papuan.DG Tarim_EMBA1 0.560
  957. gendstat: Papuan.DG Russia_Steppe_Eneolithic 1.103
  958. gendstat: Papuan.DG ONG.SG 0.818
  959. gendstat: Switzerland_Bichon.SG Natufian -1.692
  960. gendstat: Switzerland_Bichon.SG Tarim_EMBA1 -1.402
  961. gendstat: Switzerland_Bichon.SG Russia_Steppe_Eneolithic -1.010
  962. gendstat: Switzerland_Bichon.SG ONG.SG -1.347
  963. gendstat: Natufian Tarim_EMBA1 0.564
  964. gendstat: Natufian Russia_Steppe_Eneolithic 1.021
  965. gendstat: Natufian ONG.SG 0.703
  966. gendstat: Tarim_EMBA1 Russia_Steppe_Eneolithic 0.604
  967. gendstat: Tarim_EMBA1 ONG.SG 0.126
  968. gendstat: Russia_Steppe_Eneolithic ONG.SG -0.424
  969.  
  970. ##end of qpAdm: 24.951 seconds cpu 1.597 Mbytes in use
  971.  
  972.  
  973. qpAdm: parameter file: parqpadm.txt
  974. ### THE INPUT PARAMETERS
  975. ##PARAMETER NAME: VALUE
  976. fstatsname: /home/vrts/host/vrts1240K/fstatsa.txt
  977. popleft: /home/vrts/host/vrts1240K/left.txt
  978. popright: /home/vrts/host/vrts1240K/right.txt
  979. details: YES
  980. ## qpAdm version: 1520
  981. seed: 1202669484
  982. *** recommended that inbreed be explicitly set ***
  983. inbreed set NO
  984.  
  985. left pops:
  986. Armenian.DG
  987. Turkey_N.SG
  988. Russia_Samara_EBA_Yamnaya
  989. Iran_N
  990. Natufian
  991.  
  992. right pops:
  993. Mbuti.DG
  994. Russia_Ust_Ishim.DG
  995. China_Tianyuan
  996. Goyet_Neanderthal.SG
  997. Russia_Sunghir3.SG
  998. Russia_Kostenki14.SG
  999. Russia_MA1_HG.SG
  1000. SATP
  1001. Russia_DevilsCave_N.SG
  1002. Papuan.DG
  1003. Switzerland_Bichon.SG
  1004. Turkey_Epipaleolithic
  1005. Tarim_EMBA1
  1006. Russia_Steppe_Eneolithic
  1007. ONG.SG
  1008.  
  1009. codimension 1
  1010. f4info:
  1011. f4rank: 3 dof: 11 chisq: 11.513 tail: 0.401311557 dofdiff: 13 chisqdiff: -11.513 taildiff: 1
  1012. B:
  1013. scale 1.000 1.000 1.000
  1014. Russia_Ust_Ishim.DG 0.411 0.112 0.433
  1015. China_Tianyuan 0.592 -0.316 0.064
  1016. Goyet_Neanderthal.SG 0.024 0.120 -0.466
  1017. Russia_Sunghir3.SG 0.716 0.759 -0.342
  1018. Russia_Kostenki14.SG 0.662 0.409 -0.014
  1019. Russia_MA1_HG.SG 1.657 -0.570 -0.804
  1020. SATP 0.756 -0.565 2.200
  1021. Russia_DevilsCave_N.SG 0.641 -0.146 0.224
  1022. Papuan.DG 0.503 -0.253 0.697
  1023. Switzerland_Bichon.SG 1.259 1.047 -1.621
  1024. Turkey_Epipaleolithic -0.004 3.105 0.938
  1025. Tarim_EMBA1 2.053 -1.086 -1.746
  1026. Russia_Steppe_Eneolithic 1.544 -0.686 -0.279
  1027. ONG.SG 0.601 -0.102 0.905
  1028. A:
  1029. scale 330.539 667.809 1191.771
  1030. Turkey_N.SG -0.000 1.570 -0.266
  1031. Russia_Samara_EBA_Yamnaya 1.264 -0.063 -0.719
  1032. Iran_N -0.442 -1.237 -0.138
  1033. Natufian -1.485 -0.044 -1.842
  1034.  
  1035.  
  1036. full rank
  1037. f4info:
  1038. f4rank: 4 dof: 0 chisq: 0.000 tail: 1 dofdiff: 11 chisqdiff: 11.513 taildiff: 0.401311557
  1039. B:
  1040. scale 431.162 243.382 475.670 225.209
  1041. Russia_Ust_Ishim.DG 0.070 0.331 -0.394 -0.595
  1042. China_Tianyuan -0.196 0.629 0.090 -0.657
  1043. Goyet_Neanderthal.SG 0.168 0.077 -0.103 0.101
  1044. Russia_Sunghir3.SG 0.572 0.625 -1.340 -0.682
  1045. Russia_Kostenki14.SG 0.243 0.562 -1.015 -0.741
  1046. Russia_MA1_HG.SG -0.414 1.734 -0.443 -1.418
  1047. SATP -0.829 0.366 -0.142 -1.611
  1048. Russia_DevilsCave_N.SG -0.168 0.584 -0.264 -0.782
  1049. Papuan.DG -0.479 0.314 -0.334 -0.810
  1050. Switzerland_Bichon.SG 1.162 1.388 -1.675 -0.748
  1051. Turkey_Epipaleolithic 3.115 -0.174 -2.723 -0.471
  1052. Tarim_EMBA1 -0.966 2.176 -0.352 -1.519
  1053. Russia_Steppe_Eneolithic -0.615 1.526 -0.290 -1.499
  1054. ONG.SG -0.240 0.425 -0.416 -0.989
  1055. A:
  1056. scale 2.000 2.000 2.000 2.000
  1057. Turkey_N.SG 2.000 0.000 0.000 0.000
  1058. Russia_Samara_EBA_Yamnaya 0.000 2.000 0.000 0.000
  1059. Iran_N 0.000 0.000 2.000 0.000
  1060. Natufian 0.000 0.000 0.000 2.000
  1061.  
  1062.  
  1063. best coefficients: 0.476 0.053 0.606 -0.135
  1064. totmean: 0.476 0.053 0.606 -0.135
  1065. boot mean: 0.479 0.051 0.610 -0.140
  1066. std. errors: 0.069 0.043 0.068 0.090
  1067.  
  1068. error covariance (* 1,000,000)
  1069. 4759 -2205 3251 -5805
  1070. -2205 1881 -2583 2907
  1071. 3251 -2583 4607 -5276
  1072. -5805 2907 -5276 8173
  1073.  
  1074.  
  1075. summ: Armenian.DG 4 0.401312 0.479 0.051 0.610 -0.140 4759 -2205 3251 -5805 1881 ...
  1076. -2583 2907 4607 -5276 8173
  1077.  
  1078. fixed pat wt dof chisq tail prob
  1079. 0000 0 11 11.513 0.401312 0.476 0.053 0.606 -0.135 infeasible
  1080. 0001 1 12 16.524 0.168416 0.379 0.102 0.519 0.000
  1081. 0010 1 12 96.384 2.83574e-15 -0.150 0.389 0.000 0.761 infeasible
  1082. 0100 1 12 13.690 0.320959 0.532 0.000 0.680 -0.212 infeasible
  1083. 1000 1 12 95.578 4.07176e-15 0.000 0.307 0.147 0.546
  1084. 0011 2 13 270.393 0 0.620 0.380 0.000 0.000
  1085. 0101 2 13 32.530 0.0020033 0.395 0.000 0.605 0.000
  1086. 0110 2 13 199.653 0 -0.764 0.000 0.000 1.764 infeasible
  1087. 1001 2 13 233.804 0 0.000 0.121 0.879 0.000
  1088. 1010 2 13 88.267 2.99481e-13 0.000 0.372 0.000 0.628
  1089. 1100 2 13 153.600 3.87562e-26 0.000 0.000 0.604 0.396
  1090. 0111 3 14 530.619 0 1.000 0.000 0.000 0.000
  1091. 1011 3 14 977.700 0 0.000 1.000 0.000 0.000
  1092. 1101 3 14 247.309 0 0.000 0.000 1.000 0.000
  1093. 1110 3 14 226.549 0 0.000 0.000 0.000 1.000
  1094. best pat: 0000 0.401312 - -
  1095. best pat: 1000 4.07176e-15 chi(nested): 84.065 p-value for nested model: 4.78797e-20
  1096. best pat: 0101 0.0020033 not nested
  1097. best pat: 1110 1.97883e-40 not nested
  1098.  
  1099. coeffs: 0.476 0.053 0.606 -0.135
  1100.  
  1101. ## dscore:: f_4(Base, Fit, Rbase, right2)
  1102. ## genstat:: f_4(Base, Fit, right1, right2)
  1103.  
  1104. details: Turkey_N.SG Russia_Ust_Ishim.DG 0.000163 0.434389
  1105. details: Russia_Samara_EBA_Yamnaya Russia_Ust_Ishim.DG 0.001359 3.787834
  1106. details: Iran_N Russia_Ust_Ishim.DG -0.000827 -2.141866
  1107. details: Natufian Russia_Ust_Ishim.DG -0.002642 -4.352180
  1108. dscore: Russia_Ust_Ishim.DG f4: 0.000005 Z: 0.015791
  1109.  
  1110. details: Turkey_N.SG China_Tianyuan -0.000454 -1.084074
  1111. details: Russia_Samara_EBA_Yamnaya China_Tianyuan 0.002584 6.726839
  1112. details: Iran_N China_Tianyuan 0.000189 0.449878
  1113. details: Natufian China_Tianyuan -0.002919 -4.197813
  1114. dscore: China_Tianyuan f4: 0.000431 Z: 1.119659
  1115.  
  1116. details: Turkey_N.SG Goyet_Neanderthal.SG 0.000389 1.420385
  1117. details: Russia_Samara_EBA_Yamnaya Goyet_Neanderthal.SG 0.000318 1.238925
  1118. details: Iran_N Goyet_Neanderthal.SG -0.000216 -0.739497
  1119. details: Natufian Goyet_Neanderthal.SG 0.000447 0.831726
  1120. dscore: Goyet_Neanderthal.SG f4: 0.000011 Z: 0.042196
  1121.  
  1122. details: Turkey_N.SG Russia_Sunghir3.SG 0.001326 2.841951
  1123. details: Russia_Samara_EBA_Yamnaya Russia_Sunghir3.SG 0.002569 6.320022
  1124. details: Iran_N Russia_Sunghir3.SG -0.002817 -6.277040
  1125. details: Natufian Russia_Sunghir3.SG -0.003027 -4.212921
  1126. dscore: Russia_Sunghir3.SG f4: -0.000530 Z: -1.283788
  1127.  
  1128. details: Turkey_N.SG Russia_Kostenki14.SG 0.000563 1.320054
  1129. details: Russia_Samara_EBA_Yamnaya Russia_Kostenki14.SG 0.002311 6.068789
  1130. details: Iran_N Russia_Kostenki14.SG -0.002135 -4.742482
  1131. details: Natufian Russia_Kostenki14.SG -0.003290 -4.659802
  1132. dscore: Russia_Kostenki14.SG f4: -0.000458 Z: -1.133099
  1133.  
  1134. details: Turkey_N.SG Russia_MA1_HG.SG -0.000961 -2.019970
  1135. details: Russia_Samara_EBA_Yamnaya Russia_MA1_HG.SG 0.007124 16.343685
  1136. details: Iran_N Russia_MA1_HG.SG -0.000932 -1.906630
  1137. details: Natufian Russia_MA1_HG.SG -0.006296 -8.432682
  1138. dscore: Russia_MA1_HG.SG f4: 0.000209 Z: 0.469033
  1139.  
  1140. details: Turkey_N.SG SATP -0.001922 -4.266491
  1141. details: Russia_Samara_EBA_Yamnaya SATP 0.001505 3.641787
  1142. details: Iran_N SATP -0.000299 -0.643657
  1143. details: Natufian SATP -0.007155 -9.059603
  1144. dscore: SATP f4: -0.000049 Z: -0.117445
  1145.  
  1146. details: Turkey_N.SG Russia_DevilsCave_N.SG -0.000390 -1.094834
  1147. details: Russia_Samara_EBA_Yamnaya Russia_DevilsCave_N.SG 0.002400 7.580275
  1148. details: Iran_N Russia_DevilsCave_N.SG -0.000556 -1.475917
  1149. details: Natufian Russia_DevilsCave_N.SG -0.003473 -5.799012
  1150. dscore: Russia_DevilsCave_N.SG f4: 0.000075 Z: 0.224761
  1151.  
  1152. details: Turkey_N.SG Papuan.DG -0.001111 -3.293950
  1153. details: Russia_Samara_EBA_Yamnaya Papuan.DG 0.001292 4.231097
  1154. details: Iran_N Papuan.DG -0.000701 -2.057642
  1155. details: Natufian Papuan.DG -0.003597 -6.971634
  1156. dscore: Papuan.DG f4: -0.000399 Z: -1.284564
  1157.  
  1158. details: Turkey_N.SG Switzerland_Bichon.SG 0.002695 6.087952
  1159. details: Russia_Samara_EBA_Yamnaya Switzerland_Bichon.SG 0.005701 13.650713
  1160. details: Iran_N Switzerland_Bichon.SG -0.003521 -8.132123
  1161. details: Natufian Switzerland_Bichon.SG -0.003321 -4.546493
  1162. dscore: Switzerland_Bichon.SG f4: -0.000099 Z: -0.248253
  1163.  
  1164. details: Turkey_N.SG Turkey_Epipaleolithic 0.007226 15.608721
  1165. details: Russia_Samara_EBA_Yamnaya Turkey_Epipaleolithic -0.000714 -1.693723
  1166. details: Iran_N Turkey_Epipaleolithic -0.005725 -12.250475
  1167. details: Natufian Turkey_Epipaleolithic -0.002090 -2.726553
  1168. dscore: Turkey_Epipaleolithic f4: 0.000211 Z: 0.498691
  1169.  
  1170. details: Turkey_N.SG Tarim_EMBA1 -0.002241 -6.026560
  1171. details: Russia_Samara_EBA_Yamnaya Tarim_EMBA1 0.008942 24.700700
  1172. details: Iran_N Tarim_EMBA1 -0.000739 -1.808180
  1173. details: Natufian Tarim_EMBA1 -0.006745 -11.880532
  1174. dscore: Tarim_EMBA1 f4: -0.000125 Z: -0.344521
  1175.  
  1176. details: Turkey_N.SG Russia_Steppe_Eneolithic -0.001427 -4.076320
  1177. details: Russia_Samara_EBA_Yamnaya Russia_Steppe_Eneolithic 0.006270 19.961740
  1178. details: Iran_N Russia_Steppe_Eneolithic -0.000611 -1.704156
  1179. details: Natufian Russia_Steppe_Eneolithic -0.006657 -11.720790
  1180. dscore: Russia_Steppe_Eneolithic f4: 0.000185 Z: 0.568624
  1181.  
  1182. details: Turkey_N.SG ONG.SG -0.000557 -1.682404
  1183. details: Russia_Samara_EBA_Yamnaya ONG.SG 0.001748 5.850180
  1184. details: Iran_N ONG.SG -0.000875 -2.614293
  1185. details: Natufian ONG.SG -0.004391 -7.881634
  1186. dscore: ONG.SG f4: -0.000109 Z: -0.366316
  1187.  
  1188. gendstat: Mbuti.DG Russia_Ust_Ishim.DG 0.016
  1189. gendstat: Mbuti.DG China_Tianyuan 1.120
  1190. gendstat: Mbuti.DG Goyet_Neanderthal.SG 0.042
  1191. gendstat: Mbuti.DG Russia_Sunghir3.SG -1.284
  1192. gendstat: Mbuti.DG Russia_Kostenki14.SG -1.133
  1193. gendstat: Mbuti.DG Russia_MA1_HG.SG 0.469
  1194. gendstat: Mbuti.DG SATP -0.117
  1195. gendstat: Mbuti.DG Russia_DevilsCave_N.SG 0.225
  1196. gendstat: Mbuti.DG Papuan.DG -1.285
  1197. gendstat: Mbuti.DG Switzerland_Bichon.SG -0.248
  1198. gendstat: Mbuti.DG Turkey_Epipaleolithic 0.499
  1199. gendstat: Mbuti.DG Tarim_EMBA1 -0.345
  1200. gendstat: Mbuti.DG Russia_Steppe_Eneolithic 0.569
  1201. gendstat: Mbuti.DG ONG.SG -0.366
  1202. gendstat: Russia_Ust_Ishim.DG China_Tianyuan 1.057
  1203. gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG 0.012
  1204. gendstat: Russia_Ust_Ishim.DG Russia_Sunghir3.SG -1.249
  1205. gendstat: Russia_Ust_Ishim.DG Russia_Kostenki14.SG -1.047
  1206. gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG 0.458
  1207. gendstat: Russia_Ust_Ishim.DG SATP -0.121
  1208. gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG 0.192
  1209. gendstat: Russia_Ust_Ishim.DG Papuan.DG -1.122
  1210. gendstat: Russia_Ust_Ishim.DG Switzerland_Bichon.SG -0.249
  1211. gendstat: Russia_Ust_Ishim.DG Turkey_Epipaleolithic 0.455
  1212. gendstat: Russia_Ust_Ishim.DG Tarim_EMBA1 -0.354
  1213. gendstat: Russia_Ust_Ishim.DG Russia_Steppe_Eneolithic 0.496
  1214. gendstat: Russia_Ust_Ishim.DG ONG.SG -0.338
  1215. gendstat: China_Tianyuan Goyet_Neanderthal.SG -0.924
  1216. gendstat: China_Tianyuan Russia_Sunghir3.SG -2.239
  1217. gendstat: China_Tianyuan Russia_Kostenki14.SG -1.966
  1218. gendstat: China_Tianyuan Russia_MA1_HG.SG -0.485
  1219. gendstat: China_Tianyuan SATP -1.036
  1220. gendstat: China_Tianyuan Russia_DevilsCave_N.SG -0.975
  1221. gendstat: China_Tianyuan Papuan.DG -2.345
  1222. gendstat: China_Tianyuan Switzerland_Bichon.SG -1.234
  1223. gendstat: China_Tianyuan Turkey_Epipaleolithic -0.474
  1224. gendstat: China_Tianyuan Tarim_EMBA1 -1.464
  1225. gendstat: China_Tianyuan Russia_Steppe_Eneolithic -0.636
  1226. gendstat: China_Tianyuan ONG.SG -1.484
  1227. gendstat: Goyet_Neanderthal.SG Russia_Sunghir3.SG -1.169
  1228. gendstat: Goyet_Neanderthal.SG Russia_Kostenki14.SG -0.985
  1229. gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG 0.397
  1230. gendstat: Goyet_Neanderthal.SG SATP -0.125
  1231. gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG 0.158
  1232. gendstat: Goyet_Neanderthal.SG Papuan.DG -1.007
  1233. gendstat: Goyet_Neanderthal.SG Switzerland_Bichon.SG -0.235
  1234. gendstat: Goyet_Neanderthal.SG Turkey_Epipaleolithic 0.411
  1235. gendstat: Goyet_Neanderthal.SG Tarim_EMBA1 -0.314
  1236. gendstat: Goyet_Neanderthal.SG Russia_Steppe_Eneolithic 0.433
  1237. gendstat: Goyet_Neanderthal.SG ONG.SG -0.311
  1238. gendstat: Russia_Sunghir3.SG Russia_Kostenki14.SG 0.170
  1239. gendstat: Russia_Sunghir3.SG Russia_MA1_HG.SG 1.585
  1240. gendstat: Russia_Sunghir3.SG SATP 0.964
  1241. gendstat: Russia_Sunghir3.SG Russia_DevilsCave_N.SG 1.487
  1242. gendstat: Russia_Sunghir3.SG Papuan.DG 0.343
  1243. gendstat: Russia_Sunghir3.SG Switzerland_Bichon.SG 0.999
  1244. gendstat: Russia_Sunghir3.SG Turkey_Epipaleolithic 1.553
  1245. gendstat: Russia_Sunghir3.SG Tarim_EMBA1 0.991
  1246. gendstat: Russia_Sunghir3.SG Russia_Steppe_Eneolithic 1.766
  1247. gendstat: Russia_Sunghir3.SG ONG.SG 1.059
  1248. gendstat: Russia_Kostenki14.SG Russia_MA1_HG.SG 1.390
  1249. gendstat: Russia_Kostenki14.SG SATP 0.850
  1250. gendstat: Russia_Kostenki14.SG Russia_DevilsCave_N.SG 1.297
  1251. gendstat: Russia_Kostenki14.SG Papuan.DG 0.155
  1252. gendstat: Russia_Kostenki14.SG Switzerland_Bichon.SG 0.832
  1253. gendstat: Russia_Kostenki14.SG Turkey_Epipaleolithic 1.395
  1254. gendstat: Russia_Kostenki14.SG Tarim_EMBA1 0.812
  1255. gendstat: Russia_Kostenki14.SG Russia_Steppe_Eneolithic 1.613
  1256. gendstat: Russia_Kostenki14.SG ONG.SG 0.899
  1257. gendstat: Russia_MA1_HG.SG SATP -0.546
  1258. gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG -0.311
  1259. gendstat: Russia_MA1_HG.SG Papuan.DG -1.432
  1260. gendstat: Russia_MA1_HG.SG Switzerland_Bichon.SG -0.655
  1261. gendstat: Russia_MA1_HG.SG Turkey_Epipaleolithic 0.004
  1262. gendstat: Russia_MA1_HG.SG Tarim_EMBA1 -0.907
  1263. gendstat: Russia_MA1_HG.SG Russia_Steppe_Eneolithic -0.060
  1264. gendstat: Russia_MA1_HG.SG ONG.SG -0.776
  1265. gendstat: SATP Russia_DevilsCave_N.SG 0.294
  1266. gendstat: SATP Papuan.DG -0.850
  1267. gendstat: SATP Switzerland_Bichon.SG -0.105
  1268. gendstat: SATP Turkey_Epipaleolithic 0.530
  1269. gendstat: SATP Tarim_EMBA1 -0.177
  1270. gendstat: SATP Russia_Steppe_Eneolithic 0.579
  1271. gendstat: SATP ONG.SG -0.144
  1272. gendstat: Russia_DevilsCave_N.SG Papuan.DG -1.559
  1273. gendstat: Russia_DevilsCave_N.SG Switzerland_Bichon.SG -0.443
  1274. gendstat: Russia_DevilsCave_N.SG Turkey_Epipaleolithic 0.314
  1275. gendstat: Russia_DevilsCave_N.SG Tarim_EMBA1 -0.598
  1276. gendstat: Russia_DevilsCave_N.SG Russia_Steppe_Eneolithic 0.329
  1277. gendstat: Russia_DevilsCave_N.SG ONG.SG -0.607
  1278. gendstat: Papuan.DG Switzerland_Bichon.SG 0.780
  1279. gendstat: Papuan.DG Turkey_Epipaleolithic 1.434
  1280. gendstat: Papuan.DG Tarim_EMBA1 0.825
  1281. gendstat: Papuan.DG Russia_Steppe_Eneolithic 1.725
  1282. gendstat: Papuan.DG ONG.SG 1.026
  1283. gendstat: Switzerland_Bichon.SG Turkey_Epipaleolithic 0.671
  1284. gendstat: Switzerland_Bichon.SG Tarim_EMBA1 -0.065
  1285. gendstat: Switzerland_Bichon.SG Russia_Steppe_Eneolithic 0.737
  1286. gendstat: Switzerland_Bichon.SG ONG.SG -0.026
  1287. gendstat: Turkey_Epipaleolithic Tarim_EMBA1 -0.744
  1288. gendstat: Turkey_Epipaleolithic Russia_Steppe_Eneolithic -0.064
  1289. gendstat: Turkey_Epipaleolithic ONG.SG -0.768
  1290. gendstat: Tarim_EMBA1 Russia_Steppe_Eneolithic 1.021
  1291. gendstat: Tarim_EMBA1 ONG.SG 0.047
  1292. gendstat: Russia_Steppe_Eneolithic ONG.SG -0.885
  1293.  
  1294. ##end of qpAdm: 25.039 seconds cpu 1.597 Mbytes in use
  1295.  
  1296.  
  1297. qpAdm: parameter file: parqpadm.txt
  1298. ### THE INPUT PARAMETERS
  1299. ##PARAMETER NAME: VALUE
  1300. fstatsname: /home/vrts/host/vrts1240K/fstatsa.txt
  1301. popleft: /home/vrts/host/vrts1240K/left.txt
  1302. popright: /home/vrts/host/vrts1240K/right.txt
  1303. details: YES
  1304. ## qpAdm version: 1520
  1305. seed: 1202152188
  1306. *** recommended that inbreed be explicitly set ***
  1307. inbreed set NO
  1308.  
  1309. left pops:
  1310. Armenian.DG
  1311. Turkey_N.SG
  1312. Russia_Samara_EBA_Yamnaya
  1313. CHG
  1314. Natufian
  1315.  
  1316. right pops:
  1317. Mbuti.DG
  1318. Russia_Ust_Ishim.DG
  1319. China_Tianyuan
  1320. Goyet_Neanderthal.SG
  1321. Russia_Sunghir3.SG
  1322. Russia_Kostenki14.SG
  1323. Russia_MA1_HG.SG
  1324. SATP
  1325. Russia_DevilsCave_N.SG
  1326. Papuan.DG
  1327. Switzerland_Bichon.SG
  1328. Turkey_Epipaleolithic
  1329. Tarim_EMBA1
  1330. Russia_Steppe_Eneolithic
  1331. ONG.SG
  1332.  
  1333. codimension 1
  1334. f4info:
  1335. f4rank: 3 dof: 11 chisq: 45.142 tail: 4.58045052e-06 dofdiff: 13 chisqdiff: -45.142 taildiff: 1
  1336. B:
  1337. scale 1.000 1.000 1.000
  1338. Russia_Ust_Ishim.DG 0.359 0.164 0.099
  1339. China_Tianyuan 0.624 0.164 -0.307
  1340. Goyet_Neanderthal.SG -0.016 0.057 -0.012
  1341. Russia_Sunghir3.SG 0.524 0.567 0.416
  1342. Russia_Kostenki14.SG 0.507 0.489 0.092
  1343. Russia_MA1_HG.SG 1.604 0.533 -0.961
  1344. SATP 1.328 -2.824 1.172
  1345. Russia_DevilsCave_N.SG 0.665 -0.040 -0.056
  1346. Papuan.DG 0.492 0.091 -0.249
  1347. Switzerland_Bichon.SG 0.961 1.208 0.227
  1348. Turkey_Epipaleolithic -0.468 1.819 2.766
  1349. Tarim_EMBA1 1.977 0.535 -1.782
  1350. Russia_Steppe_Eneolithic 1.599 -0.176 -0.686
  1351. ONG.SG 0.568 0.166 -0.048
  1352. A:
  1353. scale 330.714 657.849 855.630
  1354. Turkey_N.SG 0.074 0.984 1.564
  1355. Russia_Samara_EBA_Yamnaya 1.363 0.830 -0.188
  1356. CHG 0.753 -1.527 0.972
  1357. Natufian -1.253 0.108 -0.758
  1358.  
  1359.  
  1360. full rank
  1361. f4info:
  1362. f4rank: 4 dof: 0 chisq: 0.000 tail: 1 dofdiff: 11 chisqdiff: 45.142 taildiff: 4.58045052e-06
  1363. B:
  1364. scale 431.162 243.382 325.645 225.209
  1365. Russia_Ust_Ishim.DG 0.070 0.331 -0.001 -0.595
  1366. China_Tianyuan -0.196 0.629 0.120 -0.657
  1367. Goyet_Neanderthal.SG 0.168 0.077 0.032 0.101
  1368. Russia_Sunghir3.SG 0.572 0.625 -0.018 -0.682
  1369. Russia_Kostenki14.SG 0.243 0.562 -0.167 -0.741
  1370. Russia_MA1_HG.SG -0.414 1.734 0.215 -1.418
  1371. SATP -0.829 0.366 3.483 -1.611
  1372. Russia_DevilsCave_N.SG -0.168 0.584 0.373 -0.782
  1373. Papuan.DG -0.479 0.314 -0.167 -0.810
  1374. Switzerland_Bichon.SG 1.162 1.388 -0.035 -0.748
  1375. Turkey_Epipaleolithic 3.115 -0.174 -0.847 -0.471
  1376. Tarim_EMBA1 -0.966 2.176 0.257 -1.519
  1377. Russia_Steppe_Eneolithic -0.615 1.526 0.907 -1.499
  1378. ONG.SG -0.240 0.425 -0.046 -0.989
  1379. A:
  1380. scale 2.000 2.000 2.000 2.000
  1381. Turkey_N.SG 2.000 0.000 0.000 0.000
  1382. Russia_Samara_EBA_Yamnaya 0.000 2.000 0.000 0.000
  1383. CHG 0.000 0.000 2.000 0.000
  1384. Natufian 0.000 0.000 0.000 2.000
  1385.  
  1386.  
  1387. best coefficients: 0.093 0.256 0.229 0.422
  1388. totmean: 0.093 0.256 0.229 0.422
  1389. boot mean: 0.090 0.256 0.228 0.425
  1390. std. errors: 0.064 0.029 0.033 0.064
  1391.  
  1392. error covariance (* 1,000,000)
  1393. 4120 -715 332 -3736
  1394. -715 821 -574 468
  1395. 332 -574 1095 -853
  1396. -3736 468 -853 4121
  1397.  
  1398.  
  1399. summ: Armenian.DG 4 0.000005 0.090 0.256 0.228 0.425 4120 -715 332 -3736 821 ...
  1400. -574 468 1095 -853 4121
  1401.  
  1402. fixed pat wt dof chisq tail prob
  1403. 0000 0 11 45.142 4.58045e-06 0.093 0.256 0.229 0.422
  1404. 0001 1 12 133.677 1.12596e-22 0.485 0.207 0.307 0.000
  1405. 0010 1 12 86.812 2.03861e-13 -0.093 0.385 0.000 0.707 infeasible
  1406. 0100 1 12 121.660 2.88278e-20 0.123 0.000 0.403 0.474
  1407. 1000 1 12 48.985 2.10378e-06 0.000 0.273 0.224 0.503
  1408. 0011 2 13 270.133 0 0.620 0.380 0.000 0.000
  1409. 0101 2 13 184.830 0 0.522 0.000 0.478 0.000
  1410. 0110 2 13 192.002 0 -1.067 0.000 0.000 2.067 infeasible
  1411. 1001 2 13 381.029 0 0.000 0.004 0.996 0.000
  1412. 1010 2 13 88.792 2.37741e-13 0.000 0.370 0.000 0.630
  1413. 1100 2 13 127.314 7.15352e-21 0.000 0.000 0.402 0.598
  1414. 0111 3 14 529.796 0 1.000 0.000 0.000 0.000
  1415. 1011 3 14 975.571 0 0.000 1.000 0.000 0.000
  1416. 1101 3 14 380.270 0 0.000 0.000 1.000 0.000
  1417. 1110 3 14 227.269 0 0.000 0.000 0.000 1.000
  1418. best pat: 0000 4.58045e-06 - -
  1419. best pat: 1000 2.10378e-06 chi(nested): 3.843 p-value for nested model: 0.0499491
  1420. best pat: 1010 2.37741e-13 chi(nested): 39.807 p-value for nested model: 2.80278e-10
  1421. best pat: 1110 1.40687e-40 chi(nested): 138.476 p-value for nested model: 5.73303e-32
  1422.  
  1423. coeffs: 0.093 0.256 0.229 0.422
  1424.  
  1425. ## dscore:: f_4(Base, Fit, Rbase, right2)
  1426. ## genstat:: f_4(Base, Fit, right1, right2)
  1427.  
  1428. details: Turkey_N.SG Russia_Ust_Ishim.DG 0.000163 0.434389
  1429. details: Russia_Samara_EBA_Yamnaya Russia_Ust_Ishim.DG 0.001359 3.787834
  1430. details: CHG Russia_Ust_Ishim.DG -0.000004 -0.008204
  1431. details: Natufian Russia_Ust_Ishim.DG -0.002642 -4.352180
  1432. dscore: Russia_Ust_Ishim.DG f4: -0.000752 Z: -2.024055
  1433.  
  1434. details: Turkey_N.SG China_Tianyuan -0.000454 -1.084074
  1435. details: Russia_Samara_EBA_Yamnaya China_Tianyuan 0.002584 6.726839
  1436. details: CHG China_Tianyuan 0.000369 0.660917
  1437. details: Natufian China_Tianyuan -0.002919 -4.197813
  1438. dscore: China_Tianyuan f4: -0.000528 Z: -1.277564
  1439.  
  1440. details: Turkey_N.SG Goyet_Neanderthal.SG 0.000389 1.420385
  1441. details: Russia_Samara_EBA_Yamnaya Goyet_Neanderthal.SG 0.000318 1.238925
  1442. details: CHG Goyet_Neanderthal.SG 0.000098 0.265263
  1443. details: Natufian Goyet_Neanderthal.SG 0.000447 0.831726
  1444. dscore: Goyet_Neanderthal.SG f4: 0.000328 Z: 1.092747
  1445.  
  1446. details: Turkey_N.SG Russia_Sunghir3.SG 0.001326 2.841951
  1447. details: Russia_Samara_EBA_Yamnaya Russia_Sunghir3.SG 0.002569 6.320022
  1448. details: CHG Russia_Sunghir3.SG -0.000056 -0.102016
  1449. details: Natufian Russia_Sunghir3.SG -0.003027 -4.212921
  1450. dscore: Russia_Sunghir3.SG f4: -0.000509 Z: -1.178429
  1451.  
  1452. details: Turkey_N.SG Russia_Kostenki14.SG 0.000563 1.320054
  1453. details: Russia_Samara_EBA_Yamnaya Russia_Kostenki14.SG 0.002311 6.068789
  1454. details: CHG Russia_Kostenki14.SG -0.000514 -0.869739
  1455. details: Natufian Russia_Kostenki14.SG -0.003290 -4.659802
  1456. dscore: Russia_Kostenki14.SG f4: -0.000862 Z: -1.996393
  1457.  
  1458. details: Turkey_N.SG Russia_MA1_HG.SG -0.000961 -2.019970
  1459. details: Russia_Samara_EBA_Yamnaya Russia_MA1_HG.SG 0.007124 16.343685
  1460. details: CHG Russia_MA1_HG.SG 0.000660 1.085688
  1461. details: Natufian Russia_MA1_HG.SG -0.006296 -8.432682
  1462. dscore: Russia_MA1_HG.SG f4: -0.000770 Z: -1.734863
  1463.  
  1464. details: Turkey_N.SG SATP -0.001922 -4.266491
  1465. details: Russia_Samara_EBA_Yamnaya SATP 0.001505 3.641787
  1466. details: CHG SATP 0.010697 15.807081
  1467. details: Natufian SATP -0.007155 -9.059603
  1468. dscore: SATP f4: -0.000361 Z: -0.768279
  1469.  
  1470. details: Turkey_N.SG Russia_DevilsCave_N.SG -0.000390 -1.094834
  1471. details: Russia_Samara_EBA_Yamnaya Russia_DevilsCave_N.SG 0.002400 7.580275
  1472. details: CHG Russia_DevilsCave_N.SG 0.001146 2.445495
  1473. details: Natufian Russia_DevilsCave_N.SG -0.003473 -5.799012
  1474. dscore: Russia_DevilsCave_N.SG f4: -0.000624 Z: -1.749964
  1475.  
  1476. details: Turkey_N.SG Papuan.DG -0.001111 -3.293950
  1477. details: Russia_Samara_EBA_Yamnaya Papuan.DG 0.001292 4.231097
  1478. details: CHG Papuan.DG -0.000514 -1.206045
  1479. details: Natufian Papuan.DG -0.003597 -6.971634
  1480. dscore: Papuan.DG f4: -0.001408 Z: -4.419844
  1481.  
  1482. details: Turkey_N.SG Switzerland_Bichon.SG 0.002695 6.087952
  1483. details: Russia_Samara_EBA_Yamnaya Switzerland_Bichon.SG 0.005701 13.650713
  1484. details: CHG Switzerland_Bichon.SG -0.000106 -0.178258
  1485. details: Natufian Switzerland_Bichon.SG -0.003321 -4.546493
  1486. dscore: Switzerland_Bichon.SG f4: 0.000285 Z: 0.647018
  1487.  
  1488. details: Turkey_N.SG Turkey_Epipaleolithic 0.007226 15.608721
  1489. details: Russia_Samara_EBA_Yamnaya Turkey_Epipaleolithic -0.000714 -1.693723
  1490. details: CHG Turkey_Epipaleolithic -0.002600 -4.328899
  1491. details: Natufian Turkey_Epipaleolithic -0.002090 -2.726553
  1492. dscore: Turkey_Epipaleolithic f4: -0.000989 Z: -2.143984
  1493.  
  1494. details: Turkey_N.SG Tarim_EMBA1 -0.002241 -6.026560
  1495. details: Russia_Samara_EBA_Yamnaya Tarim_EMBA1 0.008942 24.700700
  1496. details: CHG Tarim_EMBA1 0.000788 1.643437
  1497. details: Natufian Tarim_EMBA1 -0.006745 -11.880532
  1498. dscore: Tarim_EMBA1 f4: -0.000583 Z: -1.643168
  1499.  
  1500. details: Turkey_N.SG Russia_Steppe_Eneolithic -0.001427 -4.076320
  1501. details: Russia_Samara_EBA_Yamnaya Russia_Steppe_Eneolithic 0.006270 19.961740
  1502. details: CHG Russia_Steppe_Eneolithic 0.002785 6.075670
  1503. details: Natufian Russia_Steppe_Eneolithic -0.006657 -11.720790
  1504. dscore: Russia_Steppe_Eneolithic f4: -0.000697 Z: -2.055141
  1505.  
  1506. details: Turkey_N.SG ONG.SG -0.000557 -1.682404
  1507. details: Russia_Samara_EBA_Yamnaya ONG.SG 0.001748 5.850180
  1508. details: CHG ONG.SG -0.000140 -0.326789
  1509. details: Natufian ONG.SG -0.004391 -7.881634
  1510. dscore: ONG.SG f4: -0.001489 Z: -4.566827
  1511.  
  1512. gendstat: Mbuti.DG Russia_Ust_Ishim.DG -2.024
  1513. gendstat: Mbuti.DG China_Tianyuan -1.278
  1514. gendstat: Mbuti.DG Goyet_Neanderthal.SG 1.093
  1515. gendstat: Mbuti.DG Russia_Sunghir3.SG -1.178
  1516. gendstat: Mbuti.DG Russia_Kostenki14.SG -1.996
  1517. gendstat: Mbuti.DG Russia_MA1_HG.SG -1.735
  1518. gendstat: Mbuti.DG SATP -0.768
  1519. gendstat: Mbuti.DG Russia_DevilsCave_N.SG -1.750
  1520. gendstat: Mbuti.DG Papuan.DG -4.420
  1521. gendstat: Mbuti.DG Switzerland_Bichon.SG 0.647
  1522. gendstat: Mbuti.DG Turkey_Epipaleolithic -2.144
  1523. gendstat: Mbuti.DG Tarim_EMBA1 -1.643
  1524. gendstat: Mbuti.DG Russia_Steppe_Eneolithic -2.055
  1525. gendstat: Mbuti.DG ONG.SG -4.567
  1526. gendstat: Russia_Ust_Ishim.DG China_Tianyuan 0.500
  1527. gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG 2.479
  1528. gendstat: Russia_Ust_Ishim.DG Russia_Sunghir3.SG 0.542
  1529. gendstat: Russia_Ust_Ishim.DG Russia_Kostenki14.SG -0.235
  1530. gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG -0.037
  1531. gendstat: Russia_Ust_Ishim.DG SATP 0.794
  1532. gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG 0.324
  1533. gendstat: Russia_Ust_Ishim.DG Papuan.DG -1.785
  1534. gendstat: Russia_Ust_Ishim.DG Switzerland_Bichon.SG 2.252
  1535. gendstat: Russia_Ust_Ishim.DG Turkey_Epipaleolithic -0.499
  1536. gendstat: Russia_Ust_Ishim.DG Tarim_EMBA1 0.458
  1537. gendstat: Russia_Ust_Ishim.DG Russia_Steppe_Eneolithic 0.149
  1538. gendstat: Russia_Ust_Ishim.DG ONG.SG -1.963
  1539. gendstat: China_Tianyuan Goyet_Neanderthal.SG 1.782
  1540. gendstat: China_Tianyuan Russia_Sunghir3.SG 0.037
  1541. gendstat: China_Tianyuan Russia_Kostenki14.SG -0.681
  1542. gendstat: China_Tianyuan Russia_MA1_HG.SG -0.484
  1543. gendstat: China_Tianyuan SATP 0.318
  1544. gendstat: China_Tianyuan Russia_DevilsCave_N.SG -0.230
  1545. gendstat: China_Tianyuan Papuan.DG -2.228
  1546. gendstat: China_Tianyuan Switzerland_Bichon.SG 1.626
  1547. gendstat: China_Tianyuan Turkey_Epipaleolithic -0.871
  1548. gendstat: China_Tianyuan Tarim_EMBA1 -0.131
  1549. gendstat: China_Tianyuan Russia_Steppe_Eneolithic -0.397
  1550. gendstat: China_Tianyuan ONG.SG -2.401
  1551. gendstat: Goyet_Neanderthal.SG Russia_Sunghir3.SG -1.671
  1552. gendstat: Goyet_Neanderthal.SG Russia_Kostenki14.SG -2.377
  1553. gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG -2.099
  1554. gendstat: Goyet_Neanderthal.SG SATP -1.316
  1555. gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG -2.264
  1556. gendstat: Goyet_Neanderthal.SG Papuan.DG -4.328
  1557. gendstat: Goyet_Neanderthal.SG Switzerland_Bichon.SG -0.084
  1558. gendstat: Goyet_Neanderthal.SG Turkey_Epipaleolithic -2.496
  1559. gendstat: Goyet_Neanderthal.SG Tarim_EMBA1 -2.062
  1560. gendstat: Goyet_Neanderthal.SG Russia_Steppe_Eneolithic -2.429
  1561. gendstat: Goyet_Neanderthal.SG ONG.SG -4.415
  1562. gendstat: Russia_Sunghir3.SG Russia_Kostenki14.SG -0.759
  1563. gendstat: Russia_Sunghir3.SG Russia_MA1_HG.SG -0.525
  1564. gendstat: Russia_Sunghir3.SG SATP 0.278
  1565. gendstat: Russia_Sunghir3.SG Russia_DevilsCave_N.SG -0.268
  1566. gendstat: Russia_Sunghir3.SG Papuan.DG -2.196
  1567. gendstat: Russia_Sunghir3.SG Switzerland_Bichon.SG 1.699
  1568. gendstat: Russia_Sunghir3.SG Turkey_Epipaleolithic -0.923
  1569. gendstat: Russia_Sunghir3.SG Tarim_EMBA1 -0.173
  1570. gendstat: Russia_Sunghir3.SG Russia_Steppe_Eneolithic -0.460
  1571. gendstat: Russia_Sunghir3.SG ONG.SG -2.384
  1572. gendstat: Russia_Kostenki14.SG Russia_MA1_HG.SG 0.185
  1573. gendstat: Russia_Kostenki14.SG SATP 0.958
  1574. gendstat: Russia_Kostenki14.SG Russia_DevilsCave_N.SG 0.543
  1575. gendstat: Russia_Kostenki14.SG Papuan.DG -1.290
  1576. gendstat: Russia_Kostenki14.SG Switzerland_Bichon.SG 2.424
  1577. gendstat: Russia_Kostenki14.SG Turkey_Epipaleolithic -0.246
  1578. gendstat: Russia_Kostenki14.SG Tarim_EMBA1 0.664
  1579. gendstat: Russia_Kostenki14.SG Russia_Steppe_Eneolithic 0.397
  1580. gendstat: Russia_Kostenki14.SG ONG.SG -1.506
  1581. gendstat: Russia_MA1_HG.SG SATP 0.770
  1582. gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG 0.331
  1583. gendstat: Russia_MA1_HG.SG Papuan.DG -1.528
  1584. gendstat: Russia_MA1_HG.SG Switzerland_Bichon.SG 2.089
  1585. gendstat: Russia_MA1_HG.SG Turkey_Epipaleolithic -0.403
  1586. gendstat: Russia_MA1_HG.SG Tarim_EMBA1 0.479
  1587. gendstat: Russia_MA1_HG.SG Russia_Steppe_Eneolithic 0.183
  1588. gendstat: Russia_MA1_HG.SG ONG.SG -1.688
  1589. gendstat: SATP Russia_DevilsCave_N.SG -0.569
  1590. gendstat: SATP Papuan.DG -2.276
  1591. gendstat: SATP Switzerland_Bichon.SG 1.221
  1592. gendstat: SATP Turkey_Epipaleolithic -1.173
  1593. gendstat: SATP Tarim_EMBA1 -0.476
  1594. gendstat: SATP Russia_Steppe_Eneolithic -0.772
  1595. gendstat: SATP ONG.SG -2.393
  1596. gendstat: Russia_DevilsCave_N.SG Papuan.DG -2.503
  1597. gendstat: Russia_DevilsCave_N.SG Switzerland_Bichon.SG 1.993
  1598. gendstat: Russia_DevilsCave_N.SG Turkey_Epipaleolithic -0.777
  1599. gendstat: Russia_DevilsCave_N.SG Tarim_EMBA1 0.117
  1600. gendstat: Russia_DevilsCave_N.SG Russia_Steppe_Eneolithic -0.205
  1601. gendstat: Russia_DevilsCave_N.SG ONG.SG -2.704
  1602. gendstat: Papuan.DG Switzerland_Bichon.SG 3.942
  1603. gendstat: Papuan.DG Turkey_Epipaleolithic 0.915
  1604. gendstat: Papuan.DG Tarim_EMBA1 2.408
  1605. gendstat: Papuan.DG Russia_Steppe_Eneolithic 2.182
  1606. gendstat: Papuan.DG ONG.SG -0.275
  1607. gendstat: Switzerland_Bichon.SG Turkey_Epipaleolithic -2.422
  1608. gendstat: Switzerland_Bichon.SG Tarim_EMBA1 -1.994
  1609. gendstat: Switzerland_Bichon.SG Russia_Steppe_Eneolithic -2.430
  1610. gendstat: Switzerland_Bichon.SG ONG.SG -4.119
  1611. gendstat: Turkey_Epipaleolithic Tarim_EMBA1 0.837
  1612. gendstat: Turkey_Epipaleolithic Russia_Steppe_Eneolithic 0.645
  1613. gendstat: Turkey_Epipaleolithic ONG.SG -1.097
  1614. gendstat: Tarim_EMBA1 Russia_Steppe_Eneolithic -0.370
  1615. gendstat: Tarim_EMBA1 ONG.SG -2.623
  1616. gendstat: Russia_Steppe_Eneolithic ONG.SG -2.340
  1617.  
  1618. ##end of qpAdm: 25.009 seconds cpu 1.597 Mbytes in use
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