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- qpAdm: parameter file: parqpadm
- ### THE INPUT PARAMETERS
- ##PARAMETER NAME: VALUE
- fstatsname: fstatsa.txt
- popleft: left
- popright: right
- details: YES
- allsnps: YES
- inbreed: NO
- ## qpAdm version: 1520
- seed: 1117345406
- inbreed set NO
- inbreed set NO
- left pops:
- Armenia_EBA_KuraAraxes
- Azerbaijan_Caucasus_lowlands_LN
- Russia_Caucasus_Eneolithic
- Tajikistan_C_Sarazm
- right pops:
- Mbuti.DG
- ONG.SG
- EHG
- CHG
- Serbia_IronGates_Mesolithic
- WSHG
- Tarim_EMBA1
- Mongolia_North_N
- Iran_GanjDareh_N
- PPN
- Turkey_N
- Iran_HajjiFiruz_C
- codimension 1
- f4info:
- f4rank: 2 dof: 9 chisq: 7.958 tail: 0.538428846 dofdiff: 11 chisqdiff: -7.958 taildiff: 1
- B:
- scale 1.000 1.000
- ONG.SG 0.633 0.037
- EHG 0.661 0.822
- CHG 0.013 3.029
- Serbia_IronGates_Mesolithic -0.330 0.792
- WSHG 1.337 -0.256
- Tarim_EMBA1 1.790 -0.240
- Mongolia_North_N 0.520 -0.146
- Iran_GanjDareh_N 0.848 0.088
- PPN -1.484 -0.229
- Turkey_N -1.321 0.065
- Iran_HajjiFiruz_C -0.351 0.560
- A:
- scale 561.422 1300.385
- Azerbaijan_Caucasus_lowlands_LN -0.533 -0.468
- Russia_Caucasus_Eneolithic 0.084 1.652
- Tajikistan_C_Sarazm 1.646 -0.225
- full rank
- f4info:
- f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 9 chisqdiff: 7.958 taildiff: 0.538428846
- B:
- scale 983.061 772.210 341.045
- ONG.SG -1.053 -0.155 0.500
- EHG -1.135 0.744 0.549
- CHG -1.042 3.019 -0.159
- Serbia_IronGates_Mesolithic 0.210 0.832 -0.343
- WSHG -0.981 0.067 1.374
- Tarim_EMBA1 -1.593 -0.012 1.781
- Mongolia_North_N -0.370 -0.038 0.510
- Iran_GanjDareh_N -0.461 0.433 0.941
- PPN 1.433 -0.400 -1.482
- Turkey_N 1.243 -0.057 -1.321
- Iran_HajjiFiruz_C 0.151 0.508 -0.396
- A:
- scale 1.732 1.732 1.732
- Azerbaijan_Caucasus_lowlands_LN 1.732 0.000 0.000
- Russia_Caucasus_Eneolithic 0.000 1.732 0.000
- Tajikistan_C_Sarazm 0.000 0.000 1.732
- best coefficients: 0.613 0.199 0.188
- totmean: 0.613 0.199 0.188
- boot mean: 0.613 0.200 0.188
- std. errors: 0.055 0.066 0.030
- error covariance (* 1,000,000)
- 3017 -3224 207
- -3224 4337 -1113
- 207 -1113 906
- summ: Armenia_EBA_KuraAraxes 3 0.538429 0.613 0.200 0.188 3017 -3224 207 4337 -1113 ...
- 906
- fixed pat wt dof chisq tail prob
- 000 0 9 7.958 0.538429 0.613 0.199 0.188
- 001 1 10 42.404 6.35334e-06 0.539 0.461 0.000
- 010 1 10 18.213 0.0514795 0.759 0.000 0.241
- 100 1 10 89.785 5.90896e-15 0.000 0.954 0.046
- 011 2 11 85.499 1.26349e-13 1.000 0.000 0.000
- 101 2 11 90.887 1.11687e-14 0.000 1.000 0.000
- 110 2 11 610.777 0 0.000 0.000 1.000
- best pat: 000 0.538429 - -
- best pat: 010 0.0514795 chi(nested): 10.255 p-value for nested model: 0.00136302
- best pat: 011 1.26349e-13 chi(nested): 67.286 p-value for nested model: 2.34851e-16
- coeffs: 0.613 0.199 0.188
- ## dscore:: f_4(Base, Fit, Rbase, right2)
- ## genstat:: f_4(Base, Fit, right1, right2)
- details: Azerbaijan_Caucasus_lowlands_LN ONG.SG -0.001071 -2.904508
- details: Russia_Caucasus_Eneolithic ONG.SG -0.000200 -0.453311
- details: Tajikistan_C_Sarazm ONG.SG 0.001466 3.560359
- dscore: ONG.SG f4: -0.000420 Z: -1.305715
- details: Azerbaijan_Caucasus_lowlands_LN EHG -0.001155 -2.677411
- details: Russia_Caucasus_Eneolithic EHG 0.000964 1.845225
- details: Tajikistan_C_Sarazm EHG 0.001610 3.427783
- dscore: EHG f4: -0.000212 Z: -0.563525
- details: Azerbaijan_Caucasus_lowlands_LN CHG -0.001060 -2.445617
- details: Russia_Caucasus_Eneolithic CHG 0.003910 7.479661
- details: Tajikistan_C_Sarazm CHG -0.000467 -1.031438
- dscore: CHG f4: 0.000041 Z: 0.109604
- details: Azerbaijan_Caucasus_lowlands_LN Serbia_IronGates_Mesolithic 0.000213 0.609293
- details: Russia_Caucasus_Eneolithic Serbia_IronGates_Mesolithic 0.001078 2.636156
- details: Tajikistan_C_Sarazm Serbia_IronGates_Mesolithic -0.001004 -2.832816
- dscore: Serbia_IronGates_Mesolithic f4: 0.000156 Z: 0.527715
- details: Azerbaijan_Caucasus_lowlands_LN WSHG -0.000998 -2.369783
- details: Russia_Caucasus_Eneolithic WSHG 0.000087 0.171340
- details: Tajikistan_C_Sarazm WSHG 0.004030 8.498666
- dscore: WSHG f4: 0.000164 Z: 0.443298
- details: Azerbaijan_Caucasus_lowlands_LN Tarim_EMBA1 -0.001620 -3.873830
- details: Russia_Caucasus_Eneolithic Tarim_EMBA1 -0.000015 -0.031837
- details: Tajikistan_C_Sarazm Tarim_EMBA1 0.005223 10.932083
- dscore: Tarim_EMBA1 f4: -0.000013 Z: -0.036163
- details: Azerbaijan_Caucasus_lowlands_LN Mongolia_North_N -0.000376 -0.998097
- details: Russia_Caucasus_Eneolithic Mongolia_North_N -0.000049 -0.118430
- details: Tajikistan_C_Sarazm Mongolia_North_N 0.001496 3.764225
- dscore: Mongolia_North_N f4: 0.000041 Z: 0.129732
- details: Azerbaijan_Caucasus_lowlands_LN Iran_GanjDareh_N -0.000469 -1.316380
- details: Russia_Caucasus_Eneolithic Iran_GanjDareh_N 0.000560 1.317424
- details: Tajikistan_C_Sarazm Iran_GanjDareh_N 0.002758 7.097280
- dscore: Iran_GanjDareh_N f4: 0.000343 Z: 1.107192
- details: Azerbaijan_Caucasus_lowlands_LN PPN 0.001458 3.670153
- details: Russia_Caucasus_Eneolithic PPN -0.000518 -1.136898
- details: Tajikistan_C_Sarazm PPN -0.004346 -10.906689
- dscore: PPN f4: -0.000028 Z: -0.081144
- details: Azerbaijan_Caucasus_lowlands_LN Turkey_N 0.001265 3.838560
- details: Russia_Caucasus_Eneolithic Turkey_N -0.000074 -0.194454
- details: Tajikistan_C_Sarazm Turkey_N -0.003873 -11.054388
- dscore: Turkey_N f4: 0.000031 Z: 0.112442
- details: Azerbaijan_Caucasus_lowlands_LN Iran_HajjiFiruz_C 0.000153 0.376369
- details: Russia_Caucasus_Eneolithic Iran_HajjiFiruz_C 0.000658 1.356463
- details: Tajikistan_C_Sarazm Iran_HajjiFiruz_C -0.001163 -2.623882
- dscore: Iran_HajjiFiruz_C f4: 0.000006 Z: 0.017590
- gendstat: Mbuti.DG ONG.SG -1.306
- gendstat: Mbuti.DG EHG -0.564
- gendstat: Mbuti.DG CHG 0.110
- gendstat: Mbuti.DG Serbia_IronGates_Mesolithic 0.528
- gendstat: Mbuti.DG WSHG 0.443
- gendstat: Mbuti.DG Tarim_EMBA1 -0.036
- gendstat: Mbuti.DG Mongolia_North_N 0.130
- gendstat: Mbuti.DG Iran_GanjDareh_N 1.107
- gendstat: Mbuti.DG PPN -0.081
- gendstat: Mbuti.DG Turkey_N 0.112
- gendstat: Mbuti.DG Iran_HajjiFiruz_C 0.018
- gendstat: ONG.SG EHG 0.528
- gendstat: ONG.SG CHG 1.145
- gendstat: ONG.SG Serbia_IronGates_Mesolithic 1.824
- gendstat: ONG.SG WSHG 1.529
- gendstat: ONG.SG Tarim_EMBA1 1.156
- gendstat: ONG.SG Mongolia_North_N 1.529
- gendstat: ONG.SG Iran_GanjDareh_N 2.228
- gendstat: ONG.SG PPN 1.095
- gendstat: ONG.SG Turkey_N 1.428
- gendstat: ONG.SG Iran_HajjiFiruz_C 1.094
- gendstat: EHG CHG 0.601
- gendstat: EHG Serbia_IronGates_Mesolithic 1.244
- gendstat: EHG WSHG 1.083
- gendstat: EHG Tarim_EMBA1 0.567
- gendstat: EHG Mongolia_North_N 0.692
- gendstat: EHG Iran_GanjDareh_N 1.441
- gendstat: EHG PPN 0.463
- gendstat: EHG Turkey_N 0.717
- gendstat: EHG Iran_HajjiFiruz_C 0.518
- gendstat: CHG Serbia_IronGates_Mesolithic 0.305
- gendstat: CHG WSHG 0.281
- gendstat: CHG Tarim_EMBA1 -0.126
- gendstat: CHG Mongolia_North_N -0.000
- gendstat: CHG Iran_GanjDareh_N 0.831
- gendstat: CHG PPN -0.163
- gendstat: CHG Turkey_N -0.027
- gendstat: CHG Iran_HajjiFiruz_C -0.083
- gendstat: Serbia_IronGates_Mesolithic WSHG 0.025
- gendstat: Serbia_IronGates_Mesolithic Tarim_EMBA1 -0.532
- gendstat: Serbia_IronGates_Mesolithic Mongolia_North_N -0.395
- gendstat: Serbia_IronGates_Mesolithic Iran_GanjDareh_N 0.567
- gendstat: Serbia_IronGates_Mesolithic PPN -0.608
- gendstat: Serbia_IronGates_Mesolithic Turkey_N -0.572
- gendstat: Serbia_IronGates_Mesolithic Iran_HajjiFiruz_C -0.436
- gendstat: WSHG Tarim_EMBA1 -0.578
- gendstat: WSHG Mongolia_North_N -0.343
- gendstat: WSHG Iran_GanjDareh_N 0.490
- gendstat: WSHG PPN -0.467
- gendstat: WSHG Turkey_N -0.379
- gendstat: WSHG Iran_HajjiFiruz_C -0.376
- gendstat: Tarim_EMBA1 Mongolia_North_N 0.166
- gendstat: Tarim_EMBA1 Iran_GanjDareh_N 1.007
- gendstat: Tarim_EMBA1 PPN -0.036
- gendstat: Tarim_EMBA1 Turkey_N 0.131
- gendstat: Tarim_EMBA1 Iran_HajjiFiruz_C 0.049
- gendstat: Mongolia_North_N Iran_GanjDareh_N 0.910
- gendstat: Mongolia_North_N PPN -0.199
- gendstat: Mongolia_North_N Turkey_N -0.033
- gendstat: Mongolia_North_N Iran_HajjiFiruz_C -0.092
- gendstat: Iran_GanjDareh_N PPN -1.029
- gendstat: Iran_GanjDareh_N Turkey_N -1.016
- gendstat: Iran_GanjDareh_N Iran_HajjiFiruz_C -0.985
- gendstat: PPN Turkey_N 0.239
- gendstat: PPN Iran_HajjiFiruz_C 0.096
- gendstat: Turkey_N Iran_HajjiFiruz_C -0.083
- ##end of qpAdm: 9.705 seconds cpu 0.971 Mbytes in use
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