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dosas

vrts_moderns_fail

dosas
May 23rd, 2022
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  1. qpAdm: parameter file: parqpadm.txt
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: /home/dosas/host/dosasHO/fstatsa.txt
  5. popleft: /home/dosas/host/dosasHO/left.txt
  6. popright: /home/dosas/host/dosasHO/right.txt
  7. details: YES
  8. ## qpAdm version: 1520
  9. seed: 1796767181
  10. *** recommended that inbreed be explicitly set ***
  11. inbreed set NO
  12.  
  13. left pops:
  14. dosas
  15. Albanian
  16. Gagauz
  17. Armenian_Hemsheni
  18. Georgian
  19.  
  20. right pops:
  21. Mbuti.DG
  22. Russia_Ust_Ishim.DG
  23. Mongolia_North_N
  24. Russia_Sunghir3.SG
  25. Russia_Kostenki14.SG
  26. Russia_MA1_HG.SG
  27. SATP
  28. Iran_N
  29. Balkan_HG
  30. Papuan.DG
  31. Switzerland_Bichon.SG
  32. Natufian
  33. Russia_Steppe_Eneolithic
  34. Turkey_N.SG
  35. ONG.SG
  36.  
  37. codimension 1
  38. f4info:
  39. f4rank: 3 dof: 11 chisq: 13.310 tail: 0.273532497 dofdiff: 13 chisqdiff: -13.310 taildiff: 1
  40. B:
  41. scale 1.000 1.000 1.000
  42. Russia_Ust_Ishim.DG 0.064 0.138 0.038
  43. Mongolia_North_N 0.392 -0.299 -0.962
  44. Russia_Sunghir3.SG 0.748 1.473 1.520
  45. Russia_Kostenki14.SG 0.568 0.571 0.116
  46. Russia_MA1_HG.SG 0.743 -0.101 -0.178
  47. SATP -1.089 2.529 -1.130
  48. Iran_N -0.939 -0.404 -0.466
  49. Balkan_HG 2.165 0.860 -0.181
  50. Papuan.DG 0.228 0.336 0.193
  51. Switzerland_Bichon.SG 2.162 0.162 -0.691
  52. Natufian 0.568 -1.145 1.685
  53. Russia_Steppe_Eneolithic 0.170 0.333 -1.284
  54. Turkey_N.SG 0.707 -0.974 1.997
  55. ONG.SG 0.278 1.257 -0.448
  56. A:
  57. scale 1406.152 4073.258 4950.196
  58. Albanian 0.907 1.280 -0.024
  59. Gagauz 1.045 0.891 -1.528
  60. Armenian_Hemsheni -0.905 0.293 -0.750
  61. Georgian -1.126 1.218 -1.050
  62.  
  63.  
  64. full rank
  65. f4info:
  66. f4rank: 4 dof: 0 chisq: 0.000 tail: 1 dofdiff: 11 chisqdiff: 13.310 taildiff: 0.273532497
  67. B:
  68. scale 1273.735 1153.456 1267.606 1049.301
  69. Russia_Ust_Ishim.DG 0.301 0.201 0.106 0.138
  70. Mongolia_North_N 0.530 0.864 0.109 0.066
  71. Russia_Sunghir3.SG 1.058 0.375 -0.976 -0.555
  72. Russia_Kostenki14.SG 1.129 0.944 -0.011 0.039
  73. Russia_MA1_HG.SG 0.377 0.558 -0.809 -0.692
  74. SATP -0.629 -0.538 0.489 1.444
  75. Iran_N -1.123 -0.888 0.561 0.641
  76. Balkan_HG 1.767 1.845 -2.062 -1.747
  77. Papuan.DG 0.769 0.612 0.271 0.251
  78. Switzerland_Bichon.SG 1.884 2.170 -1.620 -1.529
  79. Natufian 0.029 -0.459 -0.955 -1.217
  80. Russia_Steppe_Eneolithic -0.594 -0.043 -0.839 -0.366
  81. Turkey_N.SG -0.394 -0.820 -1.725 -1.768
  82. ONG.SG 1.292 1.192 0.522 0.704
  83. A:
  84. scale 2.000 2.000 2.000 2.000
  85. Albanian 2.000 0.000 0.000 0.000
  86. Gagauz 0.000 2.000 0.000 0.000
  87. Armenian_Hemsheni 0.000 0.000 2.000 0.000
  88. Georgian 0.000 0.000 0.000 2.000
  89.  
  90.  
  91. best coefficients: 0.548 -0.138 1.403 -0.814
  92. totmean: 0.548 -0.138 1.403 -0.814
  93. boot mean: 0.264 0.137 1.372 -0.773
  94. std. errors: 12.157 11.490 8.389 7.484
  95.  
  96. error covariance (* 1,000,000)
  97. 147791174 -139403024 -67775234 59387084
  98. -139403024 132023058 60087828 -52707862
  99. -67775234 60087828 70381879 -62694473
  100. 59387084 -52707862 -62694473 56015251
  101.  
  102.  
  103. summ: dosas 4 0.273532 0.264 0.137 1.372 -0.773 147791174 -139403024 -67775234 59387084 132023058 ...
  104. 60087828 -52707862 70381879 -62694473 56015251
  105.  
  106. fixed pat wt dof chisq tail prob
  107. 0000 0 11 13.310 0.273532 0.548 -0.138 1.403 -0.814 infeasible
  108. 0001 1 12 16.330 0.176572 0.892 -0.423 0.530 0.000 infeasible
  109. 0010 1 12 18.267 0.107831 1.084 -0.553 0.000 0.468 infeasible
  110. 0100 1 12 14.784 0.253483 0.458 0.000 0.824 -0.282 infeasible
  111. 1000 1 12 14.382 0.276983 0.000 0.364 1.656 -1.020 infeasible
  112. 0011 2 13 30.695 0.00373521 6.006 -5.006 0.000 0.000 infeasible
  113. 0101 2 13 16.809 0.208165 0.466 0.000 0.534 0.000
  114. 0110 2 13 20.507 0.0832786 0.540 0.000 0.000 0.460
  115. 1001 2 13 19.095 0.12018 0.000 0.438 0.562 0.000
  116. 1010 2 13 24.661 0.0255682 0.000 0.505 0.000 0.495
  117. 1100 2 13 23.013 0.0415178 0.000 0.000 3.389 -2.389 infeasible
  118. 0111 3 14 52.553 2.26473e-06 1.000 0.000 0.000 0.000
  119. 1011 3 14 64.525 1.85916e-08 0.000 1.000 0.000 0.000
  120. 1101 3 14 44.867 4.28681e-05 0.000 0.000 1.000 0.000
  121. 1110 3 14 69.160 2.73917e-09 0.000 0.000 0.000 1.000
  122. best pat: 0000 0.273532 - -
  123. best pat: 1000 0.276983 chi(nested): 1.072 p-value for nested model: 0.300553 infeasible
  124. best pat: 0101 0.208165 not nested
  125. best pat: 1101 4.28681e-05 chi(nested): 28.058 p-value for nested model: 1.17746e-07
  126.  
  127. coeffs: 0.548 -0.138 1.403 -0.814
  128.  
  129. ## dscore:: f_4(Base, Fit, Rbase, right2)
  130. ## genstat:: f_4(Base, Fit, right1, right2)
  131.  
  132. details: Albanian Russia_Ust_Ishim.DG 0.000236 0.446658
  133. details: Gagauz Russia_Ust_Ishim.DG 0.000175 0.340223
  134. details: Armenian_Hemsheni Russia_Ust_Ishim.DG 0.000084 0.161049
  135. details: Georgian Russia_Ust_Ishim.DG 0.000131 0.256630
  136. dscore: Russia_Ust_Ishim.DG f4: 0.000116 Z: 0.208791
  137.  
  138. details: Albanian Mongolia_North_N 0.000416 0.960659
  139. details: Gagauz Mongolia_North_N 0.000749 1.764088
  140. details: Armenian_Hemsheni Mongolia_North_N 0.000086 0.197238
  141. details: Georgian Mongolia_North_N 0.000063 0.149082
  142. dscore: Mongolia_North_N f4: 0.000194 Z: 0.420025
  143.  
  144. details: Albanian Russia_Sunghir3.SG 0.000831 1.480142
  145. details: Gagauz Russia_Sunghir3.SG 0.000325 0.598607
  146. details: Armenian_Hemsheni Russia_Sunghir3.SG -0.000770 -1.382801
  147. details: Georgian Russia_Sunghir3.SG -0.000529 -0.958864
  148. dscore: Russia_Sunghir3.SG f4: -0.000239 Z: -0.407475
  149.  
  150. details: Albanian Russia_Kostenki14.SG 0.000886 1.575110
  151. details: Gagauz Russia_Kostenki14.SG 0.000819 1.499806
  152. details: Armenian_Hemsheni Russia_Kostenki14.SG -0.000009 -0.016209
  153. details: Georgian Russia_Kostenki14.SG 0.000037 0.068787
  154. dscore: Russia_Kostenki14.SG f4: 0.000331 Z: 0.564022
  155.  
  156. details: Albanian Russia_MA1_HG.SG 0.000296 0.492468
  157. details: Gagauz Russia_MA1_HG.SG 0.000483 0.823739
  158. details: Armenian_Hemsheni Russia_MA1_HG.SG -0.000639 -1.097844
  159. details: Georgian Russia_MA1_HG.SG -0.000659 -1.173891
  160. dscore: Russia_MA1_HG.SG f4: -0.000264 Z: -0.419525
  161.  
  162. details: Albanian SATP -0.000493 -0.820288
  163. details: Gagauz SATP -0.000466 -0.810595
  164. details: Armenian_Hemsheni SATP 0.000386 0.673093
  165. details: Georgian SATP 0.001376 2.467829
  166. dscore: SATP f4: -0.000785 Z: -1.258516
  167.  
  168. details: Albanian Iran_N -0.000882 -2.066596
  169. details: Gagauz Iran_N -0.000770 -1.883544
  170. details: Armenian_Hemsheni Iran_N 0.000443 1.058236
  171. details: Georgian Iran_N 0.000611 1.521391
  172. dscore: Iran_N f4: -0.000254 Z: -0.565464
  173.  
  174. details: Albanian Balkan_HG 0.001387 3.455852
  175. details: Gagauz Balkan_HG 0.001599 3.997426
  176. details: Armenian_Hemsheni Balkan_HG -0.001627 -4.086712
  177. details: Georgian Balkan_HG -0.001665 -4.271008
  178. dscore: Balkan_HG f4: -0.000387 Z: -0.917843
  179.  
  180. details: Albanian Papuan.DG 0.000604 1.400723
  181. details: Gagauz Papuan.DG 0.000531 1.246466
  182. details: Armenian_Hemsheni Papuan.DG 0.000214 0.491752
  183. details: Georgian Papuan.DG 0.000239 0.566223
  184. dscore: Papuan.DG f4: 0.000363 Z: 0.788211
  185.  
  186. details: Albanian Switzerland_Bichon.SG 0.001479 2.542211
  187. details: Gagauz Switzerland_Bichon.SG 0.001881 3.349836
  188. details: Armenian_Hemsheni Switzerland_Bichon.SG -0.001278 -2.210604
  189. details: Georgian Switzerland_Bichon.SG -0.001458 -2.608971
  190. dscore: Switzerland_Bichon.SG f4: -0.000055 Z: -0.088944
  191.  
  192. details: Albanian Natufian 0.000023 0.028229
  193. details: Gagauz Natufian -0.000398 -0.487367
  194. details: Armenian_Hemsheni Natufian -0.000754 -0.907027
  195. details: Georgian Natufian -0.001159 -1.461191
  196. dscore: Natufian f4: -0.000047 Z: -0.053427
  197.  
  198. details: Albanian Russia_Steppe_Eneolithic -0.000466 -1.076363
  199. details: Gagauz Russia_Steppe_Eneolithic -0.000037 -0.087320
  200. details: Armenian_Hemsheni Russia_Steppe_Eneolithic -0.000662 -1.545039
  201. details: Georgian Russia_Steppe_Eneolithic -0.000349 -0.846555
  202. dscore: Russia_Steppe_Eneolithic f4: -0.000895 Z: -1.937922
  203.  
  204. details: Albanian Turkey_N.SG -0.000310 -0.694696
  205. details: Gagauz Turkey_N.SG -0.000711 -1.617994
  206. details: Armenian_Hemsheni Turkey_N.SG -0.001361 -3.106576
  207. details: Georgian Turkey_N.SG -0.001685 -3.924007
  208. dscore: Turkey_N.SG f4: -0.000610 Z: -1.313480
  209.  
  210. details: Albanian ONG.SG 0.001014 2.219237
  211. details: Gagauz ONG.SG 0.001033 2.330234
  212. details: Armenian_Hemsheni ONG.SG 0.000412 0.930312
  213. details: Georgian ONG.SG 0.000671 1.533297
  214. dscore: ONG.SG f4: 0.000446 Z: 0.947689
  215.  
  216. gendstat: Mbuti.DG Russia_Ust_Ishim.DG 0.209
  217. gendstat: Mbuti.DG Mongolia_North_N 0.420
  218. gendstat: Mbuti.DG Russia_Sunghir3.SG -0.407
  219. gendstat: Mbuti.DG Russia_Kostenki14.SG 0.564
  220. gendstat: Mbuti.DG Russia_MA1_HG.SG -0.420
  221. gendstat: Mbuti.DG SATP -1.259
  222. gendstat: Mbuti.DG Iran_N -0.565
  223. gendstat: Mbuti.DG Balkan_HG -0.918
  224. gendstat: Mbuti.DG Papuan.DG 0.788
  225. gendstat: Mbuti.DG Switzerland_Bichon.SG -0.089
  226. gendstat: Mbuti.DG Natufian -0.053
  227. gendstat: Mbuti.DG Russia_Steppe_Eneolithic -1.938
  228. gendstat: Mbuti.DG Turkey_N.SG -1.313
  229. gendstat: Mbuti.DG ONG.SG 0.948
  230. gendstat: Russia_Ust_Ishim.DG Mongolia_North_N 0.141
  231. gendstat: Russia_Ust_Ishim.DG Russia_Sunghir3.SG -0.535
  232. gendstat: Russia_Ust_Ishim.DG Russia_Kostenki14.SG 0.316
  233. gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG -0.525
  234. gendstat: Russia_Ust_Ishim.DG SATP -1.269
  235. gendstat: Russia_Ust_Ishim.DG Iran_N -0.649
  236. gendstat: Russia_Ust_Ishim.DG Balkan_HG -0.897
  237. gendstat: Russia_Ust_Ishim.DG Papuan.DG 0.455
  238. gendstat: Russia_Ust_Ishim.DG Switzerland_Bichon.SG -0.244
  239. gendstat: Russia_Ust_Ishim.DG Natufian -0.168
  240. gendstat: Russia_Ust_Ishim.DG Russia_Steppe_Eneolithic -1.755
  241. gendstat: Russia_Ust_Ishim.DG Turkey_N.SG -1.284
  242. gendstat: Russia_Ust_Ishim.DG ONG.SG 0.595
  243. gendstat: Mongolia_North_N Russia_Sunghir3.SG -0.724
  244. gendstat: Mongolia_North_N Russia_Kostenki14.SG 0.224
  245. gendstat: Mongolia_North_N Russia_MA1_HG.SG -0.720
  246. gendstat: Mongolia_North_N SATP -1.544
  247. gendstat: Mongolia_North_N Iran_N -0.936
  248. gendstat: Mongolia_North_N Balkan_HG -1.301
  249. gendstat: Mongolia_North_N Papuan.DG 0.381
  250. gendstat: Mongolia_North_N Switzerland_Bichon.SG -0.393
  251. gendstat: Mongolia_North_N Natufian -0.264
  252. gendstat: Mongolia_North_N Russia_Steppe_Eneolithic -2.285
  253. gendstat: Mongolia_North_N Turkey_N.SG -1.643
  254. gendstat: Mongolia_North_N ONG.SG 0.598
  255. gendstat: Russia_Sunghir3.SG Russia_Kostenki14.SG 0.851
  256. gendstat: Russia_Sunghir3.SG Russia_MA1_HG.SG -0.035
  257. gendstat: Russia_Sunghir3.SG SATP -0.717
  258. gendstat: Russia_Sunghir3.SG Iran_N -0.023
  259. gendstat: Russia_Sunghir3.SG Balkan_HG -0.264
  260. gendstat: Russia_Sunghir3.SG Papuan.DG 0.970
  261. gendstat: Russia_Sunghir3.SG Switzerland_Bichon.SG 0.261
  262. gendstat: Russia_Sunghir3.SG Natufian 0.195
  263. gendstat: Russia_Sunghir3.SG Russia_Steppe_Eneolithic -1.061
  264. gendstat: Russia_Sunghir3.SG Turkey_N.SG -0.612
  265. gendstat: Russia_Sunghir3.SG ONG.SG 1.140
  266. gendstat: Russia_Kostenki14.SG Russia_MA1_HG.SG -0.842
  267. gendstat: Russia_Kostenki14.SG SATP -1.510
  268. gendstat: Russia_Kostenki14.SG Iran_N -0.974
  269. gendstat: Russia_Kostenki14.SG Balkan_HG -1.336
  270. gendstat: Russia_Kostenki14.SG Papuan.DG 0.053
  271. gendstat: Russia_Kostenki14.SG Switzerland_Bichon.SG -0.561
  272. gendstat: Russia_Kostenki14.SG Natufian -0.376
  273. gendstat: Russia_Kostenki14.SG Russia_Steppe_Eneolithic -2.028
  274. gendstat: Russia_Kostenki14.SG Turkey_N.SG -1.556
  275. gendstat: Russia_Kostenki14.SG ONG.SG 0.181
  276. gendstat: Russia_MA1_HG.SG SATP -0.663
  277. gendstat: Russia_MA1_HG.SG Iran_N 0.015
  278. gendstat: Russia_MA1_HG.SG Balkan_HG -0.208
  279. gendstat: Russia_MA1_HG.SG Papuan.DG 0.971
  280. gendstat: Russia_MA1_HG.SG Switzerland_Bichon.SG 0.281
  281. gendstat: Russia_MA1_HG.SG Natufian 0.220
  282. gendstat: Russia_MA1_HG.SG Russia_Steppe_Eneolithic -1.038
  283. gendstat: Russia_MA1_HG.SG Turkey_N.SG -0.551
  284. gendstat: Russia_MA1_HG.SG ONG.SG 1.094
  285. gendstat: SATP Iran_N 0.896
  286. gendstat: SATP Balkan_HG 0.653
  287. gendstat: SATP Papuan.DG 1.759
  288. gendstat: SATP Switzerland_Bichon.SG 0.959
  289. gendstat: SATP Natufian 0.737
  290. gendstat: SATP Russia_Steppe_Eneolithic -0.186
  291. gendstat: SATP Turkey_N.SG 0.276
  292. gendstat: SATP ONG.SG 1.883
  293. gendstat: Iran_N Balkan_HG -0.304
  294. gendstat: Iran_N Papuan.DG 1.279
  295. gendstat: Iran_N Switzerland_Bichon.SG 0.318
  296. gendstat: Iran_N Natufian 0.230
  297. gendstat: Iran_N Russia_Steppe_Eneolithic -1.406
  298. gendstat: Iran_N Turkey_N.SG -0.757
  299. gendstat: Iran_N ONG.SG 1.453
  300. gendstat: Balkan_HG Papuan.DG 1.659
  301. gendstat: Balkan_HG Switzerland_Bichon.SG 0.713
  302. gendstat: Balkan_HG Natufian 0.393
  303. gendstat: Balkan_HG Russia_Steppe_Eneolithic -1.276
  304. gendstat: Balkan_HG Turkey_N.SG -0.573
  305. gendstat: Balkan_HG ONG.SG 1.811
  306. gendstat: Papuan.DG Switzerland_Bichon.SG -0.666
  307. gendstat: Papuan.DG Natufian -0.447
  308. gendstat: Papuan.DG Russia_Steppe_Eneolithic -2.623
  309. gendstat: Papuan.DG Turkey_N.SG -1.990
  310. gendstat: Papuan.DG ONG.SG 0.195
  311. gendstat: Switzerland_Bichon.SG Natufian 0.008
  312. gendstat: Switzerland_Bichon.SG Russia_Steppe_Eneolithic -1.380
  313. gendstat: Switzerland_Bichon.SG Turkey_N.SG -0.943
  314. gendstat: Switzerland_Bichon.SG ONG.SG 0.767
  315. gendstat: Natufian Russia_Steppe_Eneolithic -0.946
  316. gendstat: Natufian Turkey_N.SG -0.661
  317. gendstat: Natufian ONG.SG 0.542
  318. gendstat: Russia_Steppe_Eneolithic Turkey_N.SG 0.643
  319. gendstat: Russia_Steppe_Eneolithic ONG.SG 2.792
  320. gendstat: Turkey_N.SG ONG.SG 2.176
  321.  
  322. ##end of qpAdm: 25.030 seconds cpu 1.597 Mbytes in use
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