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(tsdf) $ python setup.py build_ext --inplace

lamiastella
Jan 12th, 2021 (edited)
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  1. [3645:3637 0:2085] 10:58:57 Tue Jan 12 [mona@goku:pts/0 +1] ~/mesh-fusion/libfusiongpu
  2. $ python setup.py build_ext --inplace
  3. Added OpenMP
  4. running build_ext
  5. skipping 'cyfusion.cpp' Cython extension (up-to-date)
  6. building 'cyfusion' extension
  7. creating build/temp.linux-x86_64-3.8
  8. x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/mona/venv/tsdf/lib/python3.8/site-packages/numpy/core/include -I/home/mona/venv/tsdf/include -I/usr/include/python3.8 -c cyfusion.cpp -o build/temp.linux-x86_64-3.8/cyfusion.o -ffast-math -msse -msse2 -msse3 -msse4.2 -fopenmp
  9. In file included from /home/mona/venv/tsdf/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
  10. from /home/mona/venv/tsdf/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
  11. from /home/mona/venv/tsdf/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:4,
  12. from cyfusion.cpp:531:
  13. /home/mona/venv/tsdf/lib/python3.8/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
  14. 17 | #warning "Using deprecated NumPy API, disable it with " \
  15. | ^~~~~~~
  16. cyfusion.cpp: In function ‘PyObject* PyInit_cyfusion()’:
  17. cyfusion.cpp:22866:32: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  18. 22866 | __pyx_type_8cyfusion_PyViews.tp_print = 0;
  19. | ^~~~~~~~
  20. In file included from /usr/include/python3.8/object.h:746,
  21. from /usr/include/python3.8/pytime.h:6,
  22. from /usr/include/python3.8/Python.h:85,
  23. from cyfusion.cpp:4:
  24. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  25. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  26. | ^~~~~~~~
  27. cyfusion.cpp:22866:32: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  28. 22866 | __pyx_type_8cyfusion_PyViews.tp_print = 0;
  29. | ^~~~~~~~
  30. In file included from /usr/include/python3.8/object.h:746,
  31. from /usr/include/python3.8/pytime.h:6,
  32. from /usr/include/python3.8/Python.h:85,
  33. from cyfusion.cpp:4:
  34. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  35. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  36. | ^~~~~~~~
  37. cyfusion.cpp:22866:32: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  38. 22866 | __pyx_type_8cyfusion_PyViews.tp_print = 0;
  39. | ^~~~~~~~
  40. In file included from /usr/include/python3.8/object.h:746,
  41. from /usr/include/python3.8/pytime.h:6,
  42. from /usr/include/python3.8/Python.h:85,
  43. from cyfusion.cpp:4:
  44. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  45. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  46. | ^~~~~~~~
  47. cyfusion.cpp:22871:33: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  48. 22871 | __pyx_type_8cyfusion_PyVolume.tp_print = 0;
  49. | ^~~~~~~~
  50. In file included from /usr/include/python3.8/object.h:746,
  51. from /usr/include/python3.8/pytime.h:6,
  52. from /usr/include/python3.8/Python.h:85,
  53. from cyfusion.cpp:4:
  54. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  55. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  56. | ^~~~~~~~
  57. cyfusion.cpp:22871:33: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  58. 22871 | __pyx_type_8cyfusion_PyVolume.tp_print = 0;
  59. | ^~~~~~~~
  60. In file included from /usr/include/python3.8/object.h:746,
  61. from /usr/include/python3.8/pytime.h:6,
  62. from /usr/include/python3.8/Python.h:85,
  63. from cyfusion.cpp:4:
  64. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  65. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  66. | ^~~~~~~~
  67. cyfusion.cpp:22871:33: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  68. 22871 | __pyx_type_8cyfusion_PyVolume.tp_print = 0;
  69. | ^~~~~~~~
  70. In file included from /usr/include/python3.8/object.h:746,
  71. from /usr/include/python3.8/pytime.h:6,
  72. from /usr/include/python3.8/Python.h:85,
  73. from cyfusion.cpp:4:
  74. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  75. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  76. | ^~~~~~~~
  77. cyfusion.cpp:22878:26: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  78. 22878 | __pyx_type___pyx_array.tp_print = 0;
  79. | ^~~~~~~~
  80. In file included from /usr/include/python3.8/object.h:746,
  81. from /usr/include/python3.8/pytime.h:6,
  82. from /usr/include/python3.8/Python.h:85,
  83. from cyfusion.cpp:4:
  84. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  85. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  86. | ^~~~~~~~
  87. cyfusion.cpp:22878:26: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  88. 22878 | __pyx_type___pyx_array.tp_print = 0;
  89. | ^~~~~~~~
  90. In file included from /usr/include/python3.8/object.h:746,
  91. from /usr/include/python3.8/pytime.h:6,
  92. from /usr/include/python3.8/Python.h:85,
  93. from cyfusion.cpp:4:
  94. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  95. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  96. | ^~~~~~~~
  97. cyfusion.cpp:22878:26: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  98. 22878 | __pyx_type___pyx_array.tp_print = 0;
  99. | ^~~~~~~~
  100. In file included from /usr/include/python3.8/object.h:746,
  101. from /usr/include/python3.8/pytime.h:6,
  102. from /usr/include/python3.8/Python.h:85,
  103. from cyfusion.cpp:4:
  104. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  105. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  106. | ^~~~~~~~
  107. cyfusion.cpp:22883:32: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  108. 22883 | __pyx_type___pyx_MemviewEnum.tp_print = 0;
  109. | ^~~~~~~~
  110. In file included from /usr/include/python3.8/object.h:746,
  111. from /usr/include/python3.8/pytime.h:6,
  112. from /usr/include/python3.8/Python.h:85,
  113. from cyfusion.cpp:4:
  114. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  115. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  116. | ^~~~~~~~
  117. cyfusion.cpp:22883:32: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  118. 22883 | __pyx_type___pyx_MemviewEnum.tp_print = 0;
  119. | ^~~~~~~~
  120. In file included from /usr/include/python3.8/object.h:746,
  121. from /usr/include/python3.8/pytime.h:6,
  122. from /usr/include/python3.8/Python.h:85,
  123. from cyfusion.cpp:4:
  124. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  125. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  126. | ^~~~~~~~
  127. cyfusion.cpp:22883:32: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  128. 22883 | __pyx_type___pyx_MemviewEnum.tp_print = 0;
  129. | ^~~~~~~~
  130. In file included from /usr/include/python3.8/object.h:746,
  131. from /usr/include/python3.8/pytime.h:6,
  132. from /usr/include/python3.8/Python.h:85,
  133. from cyfusion.cpp:4:
  134. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  135. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  136. | ^~~~~~~~
  137. cyfusion.cpp:22895:31: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  138. 22895 | __pyx_type___pyx_memoryview.tp_print = 0;
  139. | ^~~~~~~~
  140. In file included from /usr/include/python3.8/object.h:746,
  141. from /usr/include/python3.8/pytime.h:6,
  142. from /usr/include/python3.8/Python.h:85,
  143. from cyfusion.cpp:4:
  144. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  145. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  146. | ^~~~~~~~
  147. cyfusion.cpp:22895:31: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  148. 22895 | __pyx_type___pyx_memoryview.tp_print = 0;
  149. | ^~~~~~~~
  150. In file included from /usr/include/python3.8/object.h:746,
  151. from /usr/include/python3.8/pytime.h:6,
  152. from /usr/include/python3.8/Python.h:85,
  153. from cyfusion.cpp:4:
  154. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  155. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  156. | ^~~~~~~~
  157. cyfusion.cpp:22895:31: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  158. 22895 | __pyx_type___pyx_memoryview.tp_print = 0;
  159. | ^~~~~~~~
  160. In file included from /usr/include/python3.8/object.h:746,
  161. from /usr/include/python3.8/pytime.h:6,
  162. from /usr/include/python3.8/Python.h:85,
  163. from cyfusion.cpp:4:
  164. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  165. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  166. | ^~~~~~~~
  167. cyfusion.cpp:22905:36: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  168. 22905 | __pyx_type___pyx_memoryviewslice.tp_print = 0;
  169. | ^~~~~~~~
  170. In file included from /usr/include/python3.8/object.h:746,
  171. from /usr/include/python3.8/pytime.h:6,
  172. from /usr/include/python3.8/Python.h:85,
  173. from cyfusion.cpp:4:
  174. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  175. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  176. | ^~~~~~~~
  177. cyfusion.cpp:22905:36: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  178. 22905 | __pyx_type___pyx_memoryviewslice.tp_print = 0;
  179. | ^~~~~~~~
  180. In file included from /usr/include/python3.8/object.h:746,
  181. from /usr/include/python3.8/pytime.h:6,
  182. from /usr/include/python3.8/Python.h:85,
  183. from cyfusion.cpp:4:
  184. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  185. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  186. | ^~~~~~~~
  187. cyfusion.cpp:22905:36: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  188. 22905 | __pyx_type___pyx_memoryviewslice.tp_print = 0;
  189. | ^~~~~~~~
  190. In file included from /usr/include/python3.8/object.h:746,
  191. from /usr/include/python3.8/pytime.h:6,
  192. from /usr/include/python3.8/Python.h:85,
  193. from cyfusion.cpp:4:
  194. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  195. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  196. | ^~~~~~~~
  197. cyfusion.cpp: In function ‘void __Pyx__ExceptionSave(PyThreadState*, PyObject**, PyObject**, PyObject**)’:
  198. cyfusion.cpp:24028:21: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  199. 24028 | *type = tstate->exc_type;
  200. | ^~~~~~~~
  201. | curexc_type
  202. cyfusion.cpp:24029:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  203. 24029 | *value = tstate->exc_value;
  204. | ^~~~~~~~~
  205. | curexc_value
  206. cyfusion.cpp:24030:19: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  207. 24030 | *tb = tstate->exc_traceback;
  208. | ^~~~~~~~~~~~~
  209. | curexc_traceback
  210. cyfusion.cpp: In function ‘void __Pyx__ExceptionReset(PyThreadState*, PyObject*, PyObject*, PyObject*)’:
  211. cyfusion.cpp:24037:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  212. 24037 | tmp_type = tstate->exc_type;
  213. | ^~~~~~~~
  214. | curexc_type
  215. cyfusion.cpp:24038:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  216. 24038 | tmp_value = tstate->exc_value;
  217. | ^~~~~~~~~
  218. | curexc_value
  219. cyfusion.cpp:24039:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  220. 24039 | tmp_tb = tstate->exc_traceback;
  221. | ^~~~~~~~~~~~~
  222. | curexc_traceback
  223. cyfusion.cpp:24040:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  224. 24040 | tstate->exc_type = type;
  225. | ^~~~~~~~
  226. | curexc_type
  227. cyfusion.cpp:24041:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  228. 24041 | tstate->exc_value = value;
  229. | ^~~~~~~~~
  230. | curexc_value
  231. cyfusion.cpp:24042:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  232. 24042 | tstate->exc_traceback = tb;
  233. | ^~~~~~~~~~~~~
  234. | curexc_traceback
  235. cyfusion.cpp: In function ‘int __Pyx__GetException(PyThreadState*, PyObject**, PyObject**, PyObject**)’:
  236. cyfusion.cpp:24112:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  237. 24112 | tmp_type = tstate->exc_type;
  238. | ^~~~~~~~
  239. | curexc_type
  240. cyfusion.cpp:24113:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  241. 24113 | tmp_value = tstate->exc_value;
  242. | ^~~~~~~~~
  243. | curexc_value
  244. cyfusion.cpp:24114:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  245. 24114 | tmp_tb = tstate->exc_traceback;
  246. | ^~~~~~~~~~~~~
  247. | curexc_traceback
  248. cyfusion.cpp:24115:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  249. 24115 | tstate->exc_type = local_type;
  250. | ^~~~~~~~
  251. | curexc_type
  252. cyfusion.cpp:24116:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  253. 24116 | tstate->exc_value = local_value;
  254. | ^~~~~~~~~
  255. | curexc_value
  256. cyfusion.cpp:24117:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  257. 24117 | tstate->exc_traceback = local_tb;
  258. | ^~~~~~~~~~~~~
  259. | curexc_traceback
  260. cyfusion.cpp: In function ‘void __Pyx__ExceptionSwap(PyThreadState*, PyObject**, PyObject**, PyObject**)’:
  261. cyfusion.cpp:24354:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  262. 24354 | tmp_type = tstate->exc_type;
  263. | ^~~~~~~~
  264. | curexc_type
  265. cyfusion.cpp:24355:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  266. 24355 | tmp_value = tstate->exc_value;
  267. | ^~~~~~~~~
  268. | curexc_value
  269. cyfusion.cpp:24356:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  270. 24356 | tmp_tb = tstate->exc_traceback;
  271. | ^~~~~~~~~~~~~
  272. | curexc_traceback
  273. cyfusion.cpp:24357:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  274. 24357 | tstate->exc_type = *type;
  275. | ^~~~~~~~
  276. | curexc_type
  277. cyfusion.cpp:24358:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  278. 24358 | tstate->exc_value = *value;
  279. | ^~~~~~~~~
  280. | curexc_value
  281. cyfusion.cpp:24359:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  282. 24359 | tstate->exc_traceback = *tb;
  283. | ^~~~~~~~~~~~~
  284. | curexc_traceback
  285. error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
  286. 19146/31772MB(tsdf)
  287.  
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