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misnomer001

Kura Araxes

misnomer001
Mar 4th, 2022
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  1. qpAdm: parameter file: parqpadm
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: fstatsa.txt
  5. popleft: left
  6. popright: right
  7. details: YES
  8. allsnps: YES
  9. inbreed: NO
  10. ## qpAdm version: 1520
  11. seed: 1164347692
  12. inbreed set NO
  13. inbreed set NO
  14.  
  15. left pops:
  16. Armenia_EBA_KuraAraxes
  17. Azerbaijan_Caucasus_lowlands_LN
  18. Tajikistan_C_Sarazm
  19.  
  20. right pops:
  21. Mbuti.DG
  22. ONG.SG
  23. EHG
  24. CHG
  25. Serbia_IronGates_Mesolithic
  26. WSHG
  27. Tarim_EMBA1
  28. Mongolia_North_N
  29. Iran_GanjDareh_N
  30. PPN
  31. Turkey_N
  32. Iran_HajjiFiruz_C
  33.  
  34. codimension 1
  35. f4info:
  36. f4rank: 1 dof: 10 chisq: 18.214 tail: 0.0514581208 dofdiff: 12 chisqdiff: -18.214 taildiff: 1
  37. B:
  38. scale 1.000
  39. ONG.SG 0.625
  40. EHG 0.657
  41. CHG 0.065
  42. Serbia_IronGates_Mesolithic -0.334
  43. WSHG 1.311
  44. Tarim_EMBA1 1.758
  45. Mongolia_North_N 0.504
  46. Iran_GanjDareh_N 0.833
  47. PPN -1.529
  48. Turkey_N -1.353
  49. Iran_HajjiFiruz_C -0.369
  50. A:
  51. scale 457.771
  52. Azerbaijan_Caucasus_lowlands_LN -0.426
  53. Tajikistan_C_Sarazm 1.349
  54.  
  55.  
  56. full rank
  57. f4info:
  58. f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 10 chisqdiff: 18.214 taildiff: 0.0514581208
  59. B:
  60. scale 983.061 341.045
  61. ONG.SG -1.053 0.500
  62. EHG -1.135 0.549
  63. CHG -1.042 -0.159
  64. Serbia_IronGates_Mesolithic 0.210 -0.343
  65. WSHG -0.981 1.374
  66. Tarim_EMBA1 -1.593 1.781
  67. Mongolia_North_N -0.370 0.510
  68. Iran_GanjDareh_N -0.461 0.941
  69. PPN 1.433 -1.482
  70. Turkey_N 1.243 -1.321
  71. Iran_HajjiFiruz_C 0.151 -0.396
  72. A:
  73. scale 1.414 1.414
  74. Azerbaijan_Caucasus_lowlands_LN 1.414 0.000
  75. Tajikistan_C_Sarazm 0.000 1.414
  76.  
  77.  
  78. best coefficients: 0.760 0.240
  79. totmean: 0.760 0.240
  80. boot mean: 0.760 0.240
  81. std. errors: 0.026 0.026
  82.  
  83. error covariance (* 1,000,000)
  84. 694 -694
  85. -694 694
  86.  
  87.  
  88. summ: Armenia_EBA_KuraAraxes 2 0.051458 0.760 0.240 694 -694 694
  89.  
  90. fixed pat wt dof chisq tail prob
  91. 00 0 10 18.214 0.0514581 0.760 0.240
  92. 01 1 11 85.658 1.17648e-13 1.000 0.000
  93. 10 1 11 612.139 0 0.000 1.000
  94. best pat: 00 0.0514581 - -
  95. best pat: 01 1.17648e-13 chi(nested): 67.444 p-value for nested model: 2.16801e-16
  96.  
  97. coeffs: 0.760 0.240
  98.  
  99. ## dscore:: f_4(Base, Fit, Rbase, right2)
  100. ## genstat:: f_4(Base, Fit, right1, right2)
  101.  
  102. details: Azerbaijan_Caucasus_lowlands_LN ONG.SG -0.001071 -2.904508
  103. details: Tajikistan_C_Sarazm ONG.SG 0.001466 3.560359
  104. dscore: ONG.SG f4: -0.000463 Z: -1.372526
  105.  
  106. details: Azerbaijan_Caucasus_lowlands_LN EHG -0.001155 -2.677411
  107. details: Tajikistan_C_Sarazm EHG 0.001610 3.427783
  108. dscore: EHG f4: -0.000491 Z: -1.261443
  109.  
  110. details: Azerbaijan_Caucasus_lowlands_LN CHG -0.001060 -2.445617
  111. details: Tajikistan_C_Sarazm CHG -0.000467 -1.031438
  112. dscore: CHG f4: -0.000918 Z: -2.341449
  113.  
  114. details: Azerbaijan_Caucasus_lowlands_LN Serbia_IronGates_Mesolithic 0.000213 0.609293
  115. details: Tajikistan_C_Sarazm Serbia_IronGates_Mesolithic -0.001004 -2.832816
  116. dscore: Serbia_IronGates_Mesolithic f4: -0.000079 Z: -0.252190
  117.  
  118. details: Azerbaijan_Caucasus_lowlands_LN WSHG -0.000998 -2.369783
  119. details: Tajikistan_C_Sarazm WSHG 0.004030 8.498666
  120. dscore: WSHG f4: 0.000208 Z: 0.540288
  121.  
  122. details: Azerbaijan_Caucasus_lowlands_LN Tarim_EMBA1 -0.001620 -3.873830
  123. details: Tajikistan_C_Sarazm Tarim_EMBA1 0.005223 10.932083
  124. dscore: Tarim_EMBA1 f4: 0.000021 Z: 0.054768
  125.  
  126. details: Azerbaijan_Caucasus_lowlands_LN Mongolia_North_N -0.000376 -0.998097
  127. details: Tajikistan_C_Sarazm Mongolia_North_N 0.001496 3.764225
  128. dscore: Mongolia_North_N f4: 0.000073 Z: 0.215860
  129.  
  130. details: Azerbaijan_Caucasus_lowlands_LN Iran_GanjDareh_N -0.000469 -1.316380
  131. details: Tajikistan_C_Sarazm Iran_GanjDareh_N 0.002758 7.097280
  132. dscore: Iran_GanjDareh_N f4: 0.000305 Z: 0.940273
  133.  
  134. details: Azerbaijan_Caucasus_lowlands_LN PPN 0.001458 3.670153
  135. details: Tajikistan_C_Sarazm PPN -0.004346 -10.906689
  136. dscore: PPN f4: 0.000066 Z: 0.184091
  137.  
  138. details: Azerbaijan_Caucasus_lowlands_LN Turkey_N 0.001265 3.838560
  139. details: Tajikistan_C_Sarazm Turkey_N -0.003873 -11.054388
  140. dscore: Turkey_N f4: 0.000033 Z: 0.110179
  141.  
  142. details: Azerbaijan_Caucasus_lowlands_LN Iran_HajjiFiruz_C 0.000153 0.376369
  143. details: Tajikistan_C_Sarazm Iran_HajjiFiruz_C -0.001163 -2.623882
  144. dscore: Iran_HajjiFiruz_C f4: -0.000162 Z: -0.439857
  145.  
  146. gendstat: Mbuti.DG ONG.SG -1.373
  147. gendstat: Mbuti.DG EHG -1.261
  148. gendstat: Mbuti.DG CHG -2.341
  149. gendstat: Mbuti.DG Serbia_IronGates_Mesolithic -0.252
  150. gendstat: Mbuti.DG WSHG 0.540
  151. gendstat: Mbuti.DG Tarim_EMBA1 0.055
  152. gendstat: Mbuti.DG Mongolia_North_N 0.216
  153. gendstat: Mbuti.DG Iran_GanjDareh_N 0.940
  154. gendstat: Mbuti.DG PPN 0.184
  155. gendstat: Mbuti.DG Turkey_N 0.110
  156. gendstat: Mbuti.DG Iran_HajjiFiruz_C -0.440
  157. gendstat: ONG.SG EHG -0.069
  158. gendstat: ONG.SG CHG -1.084
  159. gendstat: ONG.SG Serbia_IronGates_Mesolithic 1.137
  160. gendstat: ONG.SG WSHG 1.675
  161. gendstat: ONG.SG Tarim_EMBA1 1.300
  162. gendstat: ONG.SG Mongolia_North_N 1.673
  163. gendstat: ONG.SG Iran_GanjDareh_N 2.110
  164. gendstat: ONG.SG PPN 1.387
  165. gendstat: ONG.SG Turkey_N 1.464
  166. gendstat: ONG.SG Iran_HajjiFiruz_C 0.727
  167. gendstat: EHG CHG -0.959
  168. gendstat: EHG Serbia_IronGates_Mesolithic 1.320
  169. gendstat: EHG WSHG 1.948
  170. gendstat: EHG Tarim_EMBA1 1.417
  171. gendstat: EHG Mongolia_North_N 1.462
  172. gendstat: EHG Iran_GanjDareh_N 1.991
  173. gendstat: EHG PPN 1.341
  174. gendstat: EHG Turkey_N 1.470
  175. gendstat: EHG Iran_HajjiFiruz_C 0.738
  176. gendstat: CHG Serbia_IronGates_Mesolithic 2.126
  177. gendstat: CHG WSHG 2.488
  178. gendstat: CHG Tarim_EMBA1 2.098
  179. gendstat: CHG Mongolia_North_N 2.348
  180. gendstat: CHG Iran_GanjDareh_N 3.274
  181. gendstat: CHG PPN 2.227
  182. gendstat: CHG Turkey_N 2.537
  183. gendstat: CHG Iran_HajjiFiruz_C 1.729
  184. gendstat: Serbia_IronGates_Mesolithic WSHG 0.875
  185. gendstat: Serbia_IronGates_Mesolithic Tarim_EMBA1 0.300
  186. gendstat: Serbia_IronGates_Mesolithic Mongolia_North_N 0.490
  187. gendstat: Serbia_IronGates_Mesolithic Iran_GanjDareh_N 1.121
  188. gendstat: Serbia_IronGates_Mesolithic PPN 0.458
  189. gendstat: Serbia_IronGates_Mesolithic Turkey_N 0.487
  190. gendstat: Serbia_IronGates_Mesolithic Iran_HajjiFiruz_C -0.233
  191. gendstat: WSHG Tarim_EMBA1 -0.585
  192. gendstat: WSHG Mongolia_North_N -0.358
  193. gendstat: WSHG Iran_GanjDareh_N 0.252
  194. gendstat: WSHG PPN -0.330
  195. gendstat: WSHG Turkey_N -0.478
  196. gendstat: WSHG Iran_HajjiFiruz_C -0.840
  197. gendstat: Tarim_EMBA1 Mongolia_North_N 0.149
  198. gendstat: Tarim_EMBA1 Iran_GanjDareh_N 0.764
  199. gendstat: Tarim_EMBA1 PPN 0.105
  200. gendstat: Tarim_EMBA1 Turkey_N 0.033
  201. gendstat: Tarim_EMBA1 Iran_HajjiFiruz_C -0.439
  202. gendstat: Mongolia_North_N Iran_GanjDareh_N 0.660
  203. gendstat: Mongolia_North_N PPN -0.019
  204. gendstat: Mongolia_North_N Turkey_N -0.126
  205. gendstat: Mongolia_North_N Iran_HajjiFiruz_C -0.586
  206. gendstat: Iran_GanjDareh_N PPN -0.628
  207. gendstat: Iran_GanjDareh_N Turkey_N -0.844
  208. gendstat: Iran_GanjDareh_N Iran_HajjiFiruz_C -1.306
  209. gendstat: PPN Turkey_N -0.127
  210. gendstat: PPN Iran_HajjiFiruz_C -0.611
  211. gendstat: Turkey_N Iran_HajjiFiruz_C -0.607
  212.  
  213. ##end of qpAdm: 2.371 seconds cpu 0.688 Mbytes in use
  214.  
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