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slurm output

mahmoud-tareq
Mar 28th, 2020
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  1. rocks run roll slurm|sh
  2. Loaded plugins: fastestmirror, langpacks
  3. Cleaning repos: Rocks-7.0
  4. Cleaning up everything
  5. Maybe you want: rm -rf /var/cache/yum, to also free up space taken by orphaned data from disabled or removed repos
  6. Cleaning up list of fastest mirrors
  7. Loaded plugins: fastestmirror, langpacks
  8. Rocks-7.0 | 3.6 kB 00:00:00
  9. (1/2): Rocks-7.0/group_gz | 156 kB 00:00:00
  10. (2/2): Rocks-7.0/primary_db | 5.8 MB 00:00:00
  11. Determining fastest mirrors
  12. Package 1:mariadb-5.5.56-2.el7.x86_64 already installed and latest version
  13. Package pdsh-2.26-1.x86_64 already installed and latest version
  14. Resolving Dependencies
  15. --> Running transaction check
  16. ---> Package hwloc.x86_64 0:1.11.2-2.el7 will be installed
  17. ---> Package mariadb-server.x86_64 1:5.5.56-2.el7 will be installed
  18. --> Processing Dependency: perl-DBD-MySQL for package: 1:mariadb-server-5.5.56-2.el7.x86_64
  19. ---> Package munge.x86_64 0:0.5.13-3.el7.centos will be installed
  20. ---> Package munge-libs.x86_64 0:0.5.13-3.el7.centos will be installed
  21. ---> Package rocks-command-slurm.x86_64 0:7.0.0-17.11.07.01 will be installed
  22. ---> Package slurm.x86_64 0:19.05.2-1.el7.centos will be installed
  23. --> Processing Dependency: librrd.so.4()(64bit) for package: slurm-19.05.2-1.el7.centos.x86_64
  24. --> Processing Dependency: liblz4.so.1()(64bit) for package: slurm-19.05.2-1.el7.centos.x86_64
  25. --> Processing Dependency: libipmimonitoring.so.6()(64bit) for package: slurm-19.05.2-1.el7.centos.x86_64
  26. --> Processing Dependency: libhdf5_hl.so.8()(64bit) for package: slurm-19.05.2-1.el7.centos.x86_64
  27. --> Processing Dependency: libhdf5.so.8()(64bit) for package: slurm-19.05.2-1.el7.centos.x86_64
  28. --> Processing Dependency: libfreeipmi.so.17()(64bit) for package: slurm-19.05.2-1.el7.centos.x86_64
  29. ---> Package slurm-devel.x86_64 0:19.05.2-1.el7.centos will be installed
  30. ---> Package slurm-pam_slurm.x86_64 0:19.05.2-1.el7.centos will be installed
  31. ---> Package slurm-perlapi.x86_64 0:19.05.2-1.el7.centos will be installed
  32. ---> Package slurm-slurmctld.x86_64 0:19.05.2-1.el7.centos will be installed
  33. ---> Package slurm-slurmd.x86_64 0:19.05.2-1.el7.centos will be installed
  34. ---> Package slurm-slurmdbd.x86_64 0:19.05.2-1.el7.centos will be installed
  35. ---> Package slurm-spank-x11.x86_64 0:0.2.5-10.rocks will be installed
  36. ---> Package slurm-torque.x86_64 0:19.05.2-1.el7.centos will be installed
  37. --> Processing Dependency: perl(Switch) for package: slurm-torque-19.05.2-1.el7.centos.x86_64
  38. ---> Package xorg-x11-apps.x86_64 0:7.7-7.el7 will be installed
  39. --> Running transaction check
  40. ---> Package freeipmi.x86_64 0:1.5.7-2.el7 will be installed
  41. ---> Package hdf5.x86_64 0:1.8.12-8.el7 will be installed
  42. ---> Package lz4.x86_64 0:1.7.5-2.el7 will be installed
  43. ---> Package perl-DBD-MySQL.x86_64 0:4.023-5.el7 will be installed
  44. ---> Package perl-Switch.noarch 0:2.16-7.el7 will be installed
  45. ---> Package rrdtool.x86_64 0:1.4.8-9.el7 will be installed
  46. --> Finished Dependency Resolution
  47.  
  48. Dependencies Resolved
  49.  
  50. =======================================================================================
  51. Package Arch Version Repository Size
  52. =======================================================================================
  53. Installing:
  54. hwloc x86_64 1.11.2-2.el7 Rocks-7.0 146 k
  55. mariadb-server x86_64 1:5.5.56-2.el7 Rocks-7.0 11 M
  56. munge x86_64 0.5.13-3.el7.centos Rocks-7.0 115 k
  57. munge-libs x86_64 0.5.13-3.el7.centos Rocks-7.0 49 k
  58. rocks-command-slurm x86_64 7.0.0-17.11.07.01 Rocks-7.0 24 k
  59. slurm x86_64 19.05.2-1.el7.centos Rocks-7.0 12 M
  60. slurm-devel x86_64 19.05.2-1.el7.centos Rocks-7.0 77 k
  61. slurm-pam_slurm x86_64 19.05.2-1.el7.centos Rocks-7.0 123 k
  62. slurm-perlapi x86_64 19.05.2-1.el7.centos Rocks-7.0 780 k
  63. slurm-slurmctld x86_64 19.05.2-1.el7.centos Rocks-7.0 1.1 M
  64. slurm-slurmd x86_64 19.05.2-1.el7.centos Rocks-7.0 645 k
  65. slurm-slurmdbd x86_64 19.05.2-1.el7.centos Rocks-7.0 650 k
  66. slurm-spank-x11 x86_64 0.2.5-10.rocks Rocks-7.0 22 k
  67. slurm-torque x86_64 19.05.2-1.el7.centos Rocks-7.0 115 k
  68. xorg-x11-apps x86_64 7.7-7.el7 Rocks-7.0 307 k
  69. Installing for dependencies:
  70. freeipmi x86_64 1.5.7-2.el7 Rocks-7.0 2.0 M
  71. hdf5 x86_64 1.8.12-8.el7 Rocks-7.0 1.6 M
  72. lz4 x86_64 1.7.5-2.el7 Rocks-7.0 98 k
  73. perl-DBD-MySQL x86_64 4.023-5.el7 Rocks-7.0 140 k
  74. perl-Switch noarch 2.16-7.el7 Rocks-7.0 22 k
  75. rrdtool x86_64 1.4.8-9.el7 Rocks-7.0 440 k
  76.  
  77. Transaction Summary
  78. =======================================================================================
  79. Install 15 Packages (+6 Dependent packages)
  80.  
  81. Total download size: 32 M
  82. Installed size: 147 M
  83. Downloading packages:
  84. (1/21): freeipmi-1.5.7-2.el7.x86_64.rpm | 2.0 MB 00:00:00
  85. (2/21): hdf5-1.8.12-8.el7.x86_64.rpm | 1.6 MB 00:00:00
  86. (3/21): hwloc-1.11.2-2.el7.x86_64.rpm | 146 kB 00:00:00
  87. (4/21): lz4-1.7.5-2.el7.x86_64.rpm | 98 kB 00:00:00
  88. (5/21): munge-0.5.13-3.el7.centos.x86_64.rpm | 115 kB 00:00:00
  89. (6/21): munge-libs-0.5.13-3.el7.centos.x86_64.rpm | 49 kB 00:00:00
  90. (7/21): mariadb-server-5.5.56-2.el7.x86_64.rpm | 11 MB 00:00:00
  91. (8/21): perl-DBD-MySQL-4.023-5.el7.x86_64.rpm | 140 kB 00:00:00
  92. (9/21): perl-Switch-2.16-7.el7.noarch.rpm | 22 kB 00:00:00
  93. (10/21): rrdtool-1.4.8-9.el7.x86_64.rpm | 440 kB 00:00:00
  94. (11/21): slurm-19.05.2-1.el7.centos.x86_64.rpm | 12 MB 00:00:00
  95. (12/21): rocks-command-slurm-7.0.0-17.11.07.01.x86_64.rpm | 24 kB 00:00:00
  96. (13/21): slurm-devel-19.05.2-1.el7.centos.x86_64.rpm | 77 kB 00:00:00
  97. (14/21): slurm-pam_slurm-19.05.2-1.el7.centos.x86_64.rpm | 123 kB 00:00:00
  98. (15/21): slurm-perlapi-19.05.2-1.el7.centos.x86_64.rpm | 780 kB 00:00:00
  99. (16/21): slurm-slurmctld-19.05.2-1.el7.centos.x86_64.rpm | 1.1 MB 00:00:00
  100. (17/21): slurm-slurmd-19.05.2-1.el7.centos.x86_64.rpm | 645 kB 00:00:00
  101. (18/21): slurm-spank-x11-0.2.5-10.rocks.x86_64.rpm | 22 kB 00:00:00
  102. (19/21): slurm-torque-19.05.2-1.el7.centos.x86_64.rpm | 115 kB 00:00:00
  103. (20/21): xorg-x11-apps-7.7-7.el7.x86_64.rpm | 307 kB 00:00:00
  104. (21/21): slurm-slurmdbd-19.05.2-1.el7.centos.x86_64.rpm | 650 kB 00:00:00
  105. ---------------------------------------------------------------------------------------
  106. Total 44 MB/s | 32 MB 00:00
  107. Running transaction check
  108. Running transaction test
  109. Transaction test succeeded
  110. Running transaction
  111. Installing : munge-libs-0.5.13-3.el7.centos.x86_64 1/21
  112. Installing : munge-0.5.13-3.el7.centos.x86_64 2/21
  113. Installing : lz4-1.7.5-2.el7.x86_64 3/21
  114. Installing : perl-DBD-MySQL-4.023-5.el7.x86_64 4/21
  115. Installing : rrdtool-1.4.8-9.el7.x86_64 5/21
  116. Installing : hdf5-1.8.12-8.el7.x86_64 6/21
  117. Installing : freeipmi-1.5.7-2.el7.x86_64 7/21
  118. Installing : slurm-19.05.2-1.el7.centos.x86_64 8/21
  119. Installing : slurm-perlapi-19.05.2-1.el7.centos.x86_64 9/21
  120. Installing : perl-Switch-2.16-7.el7.noarch 10/21
  121. Installing : slurm-torque-19.05.2-1.el7.centos.x86_64 11/21
  122. Installing : slurm-spank-x11-0.2.5-10.rocks.x86_64 12/21
  123. Installing : slurm-devel-19.05.2-1.el7.centos.x86_64 13/21
  124. Installing : slurm-pam_slurm-19.05.2-1.el7.centos.x86_64 14/21
  125. Installing : slurm-slurmd-19.05.2-1.el7.centos.x86_64 15/21
  126. Installing : slurm-slurmdbd-19.05.2-1.el7.centos.x86_64 16/21
  127. Installing : slurm-slurmctld-19.05.2-1.el7.centos.x86_64 17/21
  128. Installing : 1:mariadb-server-5.5.56-2.el7.x86_64 18/21
  129. Installing : xorg-x11-apps-7.7-7.el7.x86_64 19/21
  130. Installing : rocks-command-slurm-7.0.0-17.11.07.01.x86_64 20/21
  131. Installing : hwloc-1.11.2-2.el7.x86_64 21/21
  132. Verifying : munge-0.5.13-3.el7.centos.x86_64 1/21
  133. Verifying : slurm-spank-x11-0.2.5-10.rocks.x86_64 2/21
  134. Verifying : perl-Switch-2.16-7.el7.noarch 3/21
  135. Verifying : slurm-devel-19.05.2-1.el7.centos.x86_64 4/21
  136. Verifying : slurm-pam_slurm-19.05.2-1.el7.centos.x86_64 5/21
  137. Verifying : freeipmi-1.5.7-2.el7.x86_64 6/21
  138. Verifying : slurm-slurmd-19.05.2-1.el7.centos.x86_64 7/21
  139. Verifying : lz4-1.7.5-2.el7.x86_64 8/21
  140. Verifying : slurm-torque-19.05.2-1.el7.centos.x86_64 9/21
  141. Verifying : slurm-slurmdbd-19.05.2-1.el7.centos.x86_64 10/21
  142. Verifying : hwloc-1.11.2-2.el7.x86_64 11/21
  143. Verifying : rocks-command-slurm-7.0.0-17.11.07.01.x86_64 12/21
  144. Verifying : munge-libs-0.5.13-3.el7.centos.x86_64 13/21
  145. Verifying : slurm-19.05.2-1.el7.centos.x86_64 14/21
  146. Verifying : slurm-slurmctld-19.05.2-1.el7.centos.x86_64 15/21
  147. Verifying : slurm-perlapi-19.05.2-1.el7.centos.x86_64 16/21
  148. Verifying : 1:mariadb-server-5.5.56-2.el7.x86_64 17/21
  149. Verifying : hdf5-1.8.12-8.el7.x86_64 18/21
  150. Verifying : rrdtool-1.4.8-9.el7.x86_64 19/21
  151. Verifying : perl-DBD-MySQL-4.023-5.el7.x86_64 20/21
  152. Verifying : xorg-x11-apps-7.7-7.el7.x86_64 21/21
  153.  
  154. Installed:
  155. hwloc.x86_64 0:1.11.2-2.el7
  156. mariadb-server.x86_64 1:5.5.56-2.el7
  157. munge.x86_64 0:0.5.13-3.el7.centos
  158. munge-libs.x86_64 0:0.5.13-3.el7.centos
  159. rocks-command-slurm.x86_64 0:7.0.0-17.11.07.01
  160. slurm.x86_64 0:19.05.2-1.el7.centos
  161. slurm-devel.x86_64 0:19.05.2-1.el7.centos
  162. slurm-pam_slurm.x86_64 0:19.05.2-1.el7.centos
  163. slurm-perlapi.x86_64 0:19.05.2-1.el7.centos
  164. slurm-slurmctld.x86_64 0:19.05.2-1.el7.centos
  165. slurm-slurmd.x86_64 0:19.05.2-1.el7.centos
  166. slurm-slurmdbd.x86_64 0:19.05.2-1.el7.centos
  167. slurm-spank-x11.x86_64 0:0.2.5-10.rocks
  168. slurm-torque.x86_64 0:19.05.2-1.el7.centos
  169. xorg-x11-apps.x86_64 0:7.7-7.el7
  170.  
  171. Dependency Installed:
  172. freeipmi.x86_64 0:1.5.7-2.el7 hdf5.x86_64 0:1.8.12-8.el7
  173. lz4.x86_64 0:1.7.5-2.el7 perl-DBD-MySQL.x86_64 0:4.023-5.el7
  174. perl-Switch.noarch 0:2.16-7.el7 rrdtool.x86_64 0:1.4.8-9.el7
  175.  
  176. Complete!
  177. Created symlink from /etc/systemd/system/multi-user.target.wants/munge.service to /usr/lib/systemd/system/munge.service.
  178. Created symlink from /etc/systemd/system/multi-user.target.wants/slurmd.service to /usr/lib/systemd/system/slurmd.service.
  179. /etc/logrotate.d/RCS/slurm,v <-- /etc/logrotate.d/slurm
  180. initial revision: 1.1
  181. done
  182. /etc/logrotate.d/RCS/slurm,v --> /etc/logrotate.d/slurm
  183. revision 1.1 (locked)
  184. done
  185. /etc/slurm/RCS/suspendhost.sh,v <-- /etc/slurm/suspendhost.sh
  186. initial revision: 1.1
  187. done
  188. /etc/slurm/RCS/suspendhost.sh,v --> /etc/slurm/suspendhost.sh
  189. revision 1.1 (locked)
  190. done
  191. /etc/slurm/RCS/resumehost.sh,v <-- /etc/slurm/resumehost.sh
  192. initial revision: 1.1
  193. done
  194. /etc/slurm/RCS/resumehost.sh,v --> /etc/slurm/resumehost.sh
  195. revision 1.1 (locked)
  196. done
  197. Created symlink from /etc/systemd/system/multi-user.target.wants/slurmdbd.service to /usr/lib/systemd/system/slurmdbd.service.
  198. Created symlink from /etc/systemd/system/multi-user.target.wants/mariadb.service to /usr/lib/systemd/system/mariadb.service.
  199. sacctmgr: error: slurm_persist_conn_open_without_init: failed to open persistent connection to 127:6819: Invalid argument
  200. sacctmgr: error: slurmdbd: Sending PersistInit msg: Invalid argument
  201. sacctmgr: error: Problem talking to the database: Invalid argument
  202. sacctmgr: error: slurm_persist_conn_open_without_init: failed to open persistent connection to 127:6819: Invalid argument
  203. sacctmgr: error: slurmdbd: Sending PersistInit msg: Invalid argument
  204. sacctmgr: error: Problem talking to the database: Invalid argument
  205. sacctmgr: error: slurm_persist_conn_open_without_init: failed to open persistent connection to 127:6819: Invalid argument
  206. sacctmgr: error: slurmdbd: Sending PersistInit msg: Invalid argument
  207. sacctmgr: error: Problem talking to the database: Invalid argument
  208. sacctmgr: error: slurm_persist_conn_open_without_init: failed to open persistent connection to 127:6819: Invalid argument
  209. sacctmgr: error: slurmdbd: Sending PersistInit msg: Invalid argument
  210. sacctmgr: error: Problem talking to the database: Invalid argument
  211. sacctmgr: error: slurm_persist_conn_open_without_init: failed to open persistent connection to 127:6819: Invalid argument
  212. sacctmgr: error: slurmdbd: Sending PersistInit msg: Invalid argument
  213. sacctmgr: error: Problem talking to the database: Invalid argument
  214. sacctmgr: error: slurm_persist_conn_open_without_init: failed to open persistent connection to 127:6819: Invalid argument
  215. sacctmgr: error: slurmdbd: Sending PersistInit msg: Invalid argument
  216. sacctmgr: error: Problem talking to the database: Invalid argument
  217. Created symlink from /etc/systemd/system/multi-user.target.wants/slurmctld.service to /usr/lib/systemd/system/slurmctld.service.
  218. ########################################################################
  219. # WARNING: The command: #
  220. # #
  221. # sacctmgr -i create cluster rocks.vm #
  222. # #
  223. # failed. Please run this command again #
  224. ########################################################################
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