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misnomer001

pandit kangju pass

misnomer001
Apr 14th, 2022
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  1. qpAdm: parameter file: parqpadm
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: fstatsa.txt
  5. popleft: left
  6. popright: right
  7. details: YES
  8. inbreed: NO
  9. ## qpAdm version: 1520
  10. seed: 2002036505
  11. inbreed set NO
  12. inbreed set NO
  13.  
  14. left pops:
  15. Kashmiri_Pandit.DG
  16. Iran_ShahrISokhta_BA2
  17. Kazakhstan_Kangju.SG
  18. Irula.DG
  19.  
  20. right pops:
  21. Mbuti.DG
  22. ZlatyKun
  23. ONG.SG
  24. Mongolia_North_N
  25. Serbia_IronGates_Mesolithic
  26. Iran_GanjDareh_N
  27. CHG
  28. EHG
  29. WSHG
  30. Tarim_EMBA1
  31. Russia_Samara_EBA_Yamnaya
  32. Kazakhstan_MLBA_Dali
  33. Uzbekistan_Bustan_BA
  34. Russia_MLBA_Sintashta
  35.  
  36. codimension 1
  37. f4info:
  38. f4rank: 2 dof: 11 chisq: 14.299 tail: 0.216863768 dofdiff: 13 chisqdiff: -14.299 taildiff: 1
  39. B:
  40. scale 1.000 1.000
  41. ZlatyKun 0.006 0.176
  42. ONG.SG -0.716 0.590
  43. Mongolia_North_N -0.238 0.372
  44. Serbia_IronGates_Mesolithic 1.404 1.425
  45. Iran_GanjDareh_N 0.568 -2.347
  46. CHG 0.986 -0.629
  47. EHG 1.319 0.815
  48. WSHG 1.015 -0.078
  49. Tarim_EMBA1 0.892 0.249
  50. Russia_Samara_EBA_Yamnaya 1.277 0.282
  51. Kazakhstan_MLBA_Dali 1.231 0.602
  52. Uzbekistan_Bustan_BA 0.726 -1.671
  53. Russia_MLBA_Sintashta 1.387 0.763
  54. A:
  55. scale 413.272 1627.474
  56. Iran_ShahrISokhta_BA2 -0.328 -1.319
  57. Kazakhstan_Kangju.SG 0.956 0.629
  58. Irula.DG -1.407 0.929
  59.  
  60.  
  61. full rank
  62. f4info:
  63. f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 11 chisqdiff: 14.299 taildiff: 0.216863768
  64. B:
  65. scale 901.086 380.944 303.098
  66. ZlatyKun 0.202 0.200 0.118
  67. ONG.SG 0.281 -0.421 0.894
  68. Mongolia_North_N 0.143 -0.034 0.372
  69. Serbia_IronGates_Mesolithic -1.602 1.659 -1.082
  70. Iran_GanjDareh_N 1.705 0.368 -0.885
  71. CHG -0.658 0.665 -1.292
  72. EHG -1.245 1.427 -1.131
  73. WSHG -0.311 1.063 -0.970
  74. Tarim_EMBA1 -0.970 0.786 -0.940
  75. Russia_Samara_EBA_Yamnaya -0.913 1.284 -1.215
  76. Kazakhstan_MLBA_Dali -1.008 1.368 -1.055
  77. Uzbekistan_Bustan_BA 0.704 0.418 -1.044
  78. Russia_MLBA_Sintashta -1.422 1.404 -1.282
  79. A:
  80. scale 1.732 1.732 1.732
  81. Iran_ShahrISokhta_BA2 1.732 0.000 0.000
  82. Kazakhstan_Kangju.SG 0.000 1.732 0.000
  83. Irula.DG 0.000 0.000 1.732
  84.  
  85.  
  86. best coefficients: 0.355 0.433 0.211
  87. totmean: 0.355 0.433 0.211
  88. boot mean: 0.355 0.433 0.212
  89. std. errors: 0.059 0.033 0.046
  90.  
  91. error covariance (* 1,000,000)
  92. 3496 -1227 -2269
  93. -1227 1066 161
  94. -2269 161 2108
  95.  
  96.  
  97. summ: Kashmiri_Pandit.DG 3 0.216864 0.355 0.433 0.212 3496 -1227 -2269 1066 161 ...
  98. 2108
  99.  
  100. fixed pat wt dof chisq tail prob
  101. 000 0 11 14.299 0.216864 0.355 0.433 0.211
  102. 001 1 12 36.158 0.000305573 0.576 0.424 0.000
  103. 010 1 12 188.149 0 0.891 0.000 0.109
  104. 100 1 12 50.880 9.77828e-07 0.000 0.557 0.443
  105. 011 2 13 192.348 0 1.000 0.000 0.000
  106. 101 2 13 300.065 0 0.000 1.000 0.000
  107. 110 2 13 382.359 0 0.000 0.000 1.000
  108. best pat: 000 0.216864 - -
  109. best pat: 001 0.000305573 chi(nested): 21.859 p-value for nested model: 2.935e-06
  110. best pat: 011 5.07049e-34 chi(nested): 156.190 p-value for nested model: 7.69411e-36
  111.  
  112. coeffs: 0.355 0.433 0.211
  113.  
  114. ## dscore:: f_4(Base, Fit, Rbase, right2)
  115. ## genstat:: f_4(Base, Fit, right1, right2)
  116.  
  117. details: Iran_ShahrISokhta_BA2 ZlatyKun 0.000225 0.489341
  118. details: Kazakhstan_Kangju.SG ZlatyKun 0.000526 1.119411
  119. details: Irula.DG ZlatyKun 0.000391 0.770666
  120. dscore: ZlatyKun f4: 0.000390 Z: 0.932633
  121.  
  122. details: Iran_ShahrISokhta_BA2 ONG.SG 0.000312 0.799483
  123. details: Kazakhstan_Kangju.SG ONG.SG -0.001104 -2.805246
  124. details: Irula.DG ONG.SG 0.002951 6.769145
  125. dscore: ONG.SG f4: 0.000257 Z: 0.720402
  126.  
  127. details: Iran_ShahrISokhta_BA2 Mongolia_North_N 0.000159 0.407363
  128. details: Kazakhstan_Kangju.SG Mongolia_North_N -0.000089 -0.234413
  129. details: Irula.DG Mongolia_North_N 0.001227 2.908585
  130. dscore: Mongolia_North_N f4: 0.000278 Z: 0.805546
  131.  
  132. details: Iran_ShahrISokhta_BA2 Serbia_IronGates_Mesolithic -0.001778 -4.726327
  133. details: Kazakhstan_Kangju.SG Serbia_IronGates_Mesolithic 0.004355 11.786873
  134. details: Irula.DG Serbia_IronGates_Mesolithic -0.003569 -8.931506
  135. dscore: Serbia_IronGates_Mesolithic f4: 0.000500 Z: 1.495543
  136.  
  137. details: Iran_ShahrISokhta_BA2 Iran_GanjDareh_N 0.001892 5.193503
  138. details: Kazakhstan_Kangju.SG Iran_GanjDareh_N 0.000965 2.635484
  139. details: Irula.DG Iran_GanjDareh_N -0.002919 -7.605584
  140. dscore: Iran_GanjDareh_N f4: 0.000473 Z: 1.443914
  141.  
  142. details: Iran_ShahrISokhta_BA2 CHG -0.000730 -1.658953
  143. details: Kazakhstan_Kangju.SG CHG 0.001745 4.053116
  144. details: Irula.DG CHG -0.004263 -9.149596
  145. dscore: CHG f4: -0.000405 Z: -1.025475
  146.  
  147. details: Iran_ShahrISokhta_BA2 EHG -0.001381 -3.202880
  148. details: Kazakhstan_Kangju.SG EHG 0.003746 8.795711
  149. details: Irula.DG EHG -0.003731 -8.504614
  150. dscore: EHG f4: 0.000343 Z: 0.900758
  151.  
  152. details: Iran_ShahrISokhta_BA2 WSHG -0.000345 -0.788883
  153. details: Kazakhstan_Kangju.SG WSHG 0.002790 6.232127
  154. details: Irula.DG WSHG -0.003200 -6.942847
  155. dscore: WSHG f4: 0.000410 Z: 1.042413
  156.  
  157. details: Iran_ShahrISokhta_BA2 Tarim_EMBA1 -0.001077 -2.438890
  158. details: Kazakhstan_Kangju.SG Tarim_EMBA1 0.002063 4.706961
  159. details: Irula.DG Tarim_EMBA1 -0.003101 -6.373243
  160. dscore: Tarim_EMBA1 f4: -0.000144 Z: -0.358296
  161.  
  162. details: Iran_ShahrISokhta_BA2 Russia_Samara_EBA_Yamnaya -0.001013 -2.819658
  163. details: Kazakhstan_Kangju.SG Russia_Samara_EBA_Yamnaya 0.003372 9.640231
  164. details: Irula.DG Russia_Samara_EBA_Yamnaya -0.004009 -10.558448
  165. dscore: Russia_Samara_EBA_Yamnaya f4: 0.000253 Z: 0.792660
  166.  
  167. details: Iran_ShahrISokhta_BA2 Kazakhstan_MLBA_Dali -0.001118 -2.642415
  168. details: Kazakhstan_Kangju.SG Kazakhstan_MLBA_Dali 0.003592 8.760509
  169. details: Irula.DG Kazakhstan_MLBA_Dali -0.003480 -7.812277
  170. dscore: Kazakhstan_MLBA_Dali f4: 0.000423 Z: 1.136257
  171.  
  172. details: Iran_ShahrISokhta_BA2 Uzbekistan_Bustan_BA 0.000781 2.194005
  173. details: Kazakhstan_Kangju.SG Uzbekistan_Bustan_BA 0.001097 3.154979
  174. details: Irula.DG Uzbekistan_Bustan_BA -0.003446 -9.278173
  175. dscore: Uzbekistan_Bustan_BA f4: 0.000024 Z: 0.077475
  176.  
  177. details: Iran_ShahrISokhta_BA2 Russia_MLBA_Sintashta -0.001578 -4.812586
  178. details: Kazakhstan_Kangju.SG Russia_MLBA_Sintashta 0.003687 11.781635
  179. details: Irula.DG Russia_MLBA_Sintashta -0.004229 -12.516052
  180. dscore: Russia_MLBA_Sintashta f4: 0.000142 Z: 0.497107
  181.  
  182. gendstat: Mbuti.DG ZlatyKun 0.933
  183. gendstat: Mbuti.DG ONG.SG 0.720
  184. gendstat: Mbuti.DG Mongolia_North_N 0.806
  185. gendstat: Mbuti.DG Serbia_IronGates_Mesolithic 1.496
  186. gendstat: Mbuti.DG Iran_GanjDareh_N 1.444
  187. gendstat: Mbuti.DG CHG -1.025
  188. gendstat: Mbuti.DG EHG 0.901
  189. gendstat: Mbuti.DG WSHG 1.042
  190. gendstat: Mbuti.DG Tarim_EMBA1 -0.358
  191. gendstat: Mbuti.DG Russia_Samara_EBA_Yamnaya 0.793
  192. gendstat: Mbuti.DG Kazakhstan_MLBA_Dali 1.136
  193. gendstat: Mbuti.DG Uzbekistan_Bustan_BA 0.077
  194. gendstat: Mbuti.DG Russia_MLBA_Sintashta 0.497
  195. gendstat: ZlatyKun ONG.SG -0.303
  196. gendstat: ZlatyKun Mongolia_North_N -0.255
  197. gendstat: ZlatyKun Serbia_IronGates_Mesolithic 0.250
  198. gendstat: ZlatyKun Iran_GanjDareh_N 0.188
  199. gendstat: ZlatyKun CHG -1.630
  200. gendstat: ZlatyKun EHG -0.103
  201. gendstat: ZlatyKun WSHG 0.040
  202. gendstat: ZlatyKun Tarim_EMBA1 -1.090
  203. gendstat: ZlatyKun Russia_Samara_EBA_Yamnaya -0.319
  204. gendstat: ZlatyKun Kazakhstan_MLBA_Dali 0.070
  205. gendstat: ZlatyKun Uzbekistan_Bustan_BA -0.847
  206. gendstat: ZlatyKun Russia_MLBA_Sintashta -0.603
  207. gendstat: ONG.SG Mongolia_North_N 0.064
  208. gendstat: ONG.SG Serbia_IronGates_Mesolithic 0.631
  209. gendstat: ONG.SG Iran_GanjDareh_N 0.562
  210. gendstat: ONG.SG CHG -1.495
  211. gendstat: ONG.SG EHG 0.203
  212. gendstat: ONG.SG WSHG 0.366
  213. gendstat: ONG.SG Tarim_EMBA1 -0.979
  214. gendstat: ONG.SG Russia_Samara_EBA_Yamnaya -0.010
  215. gendstat: ONG.SG Kazakhstan_MLBA_Dali 0.399
  216. gendstat: ONG.SG Uzbekistan_Bustan_BA -0.621
  217. gendstat: ONG.SG Russia_MLBA_Sintashta -0.331
  218. gendstat: Mongolia_North_N Serbia_IronGates_Mesolithic 0.610
  219. gendstat: Mongolia_North_N Iran_GanjDareh_N 0.531
  220. gendstat: Mongolia_North_N CHG -1.614
  221. gendstat: Mongolia_North_N EHG 0.163
  222. gendstat: Mongolia_North_N WSHG 0.337
  223. gendstat: Mongolia_North_N Tarim_EMBA1 -1.071
  224. gendstat: Mongolia_North_N Russia_Samara_EBA_Yamnaya -0.073
  225. gendstat: Mongolia_North_N Kazakhstan_MLBA_Dali 0.386
  226. gendstat: Mongolia_North_N Uzbekistan_Bustan_BA -0.739
  227. gendstat: Mongolia_North_N Russia_MLBA_Sintashta -0.418
  228. gendstat: Serbia_IronGates_Mesolithic Iran_GanjDareh_N -0.082
  229. gendstat: Serbia_IronGates_Mesolithic CHG -2.309
  230. gendstat: Serbia_IronGates_Mesolithic EHG -0.536
  231. gendstat: Serbia_IronGates_Mesolithic WSHG -0.260
  232. gendstat: Serbia_IronGates_Mesolithic Tarim_EMBA1 -1.724
  233. gendstat: Serbia_IronGates_Mesolithic Russia_Samara_EBA_Yamnaya -1.028
  234. gendstat: Serbia_IronGates_Mesolithic Kazakhstan_MLBA_Dali -0.251
  235. gendstat: Serbia_IronGates_Mesolithic Uzbekistan_Bustan_BA -1.597
  236. gendstat: Serbia_IronGates_Mesolithic Russia_MLBA_Sintashta -1.734
  237. gendstat: Iran_GanjDareh_N CHG -2.357
  238. gendstat: Iran_GanjDareh_N EHG -0.345
  239. gendstat: Iran_GanjDareh_N WSHG -0.164
  240. gendstat: Iran_GanjDareh_N Tarim_EMBA1 -1.560
  241. gendstat: Iran_GanjDareh_N Russia_Samara_EBA_Yamnaya -0.764
  242. gendstat: Iran_GanjDareh_N Kazakhstan_MLBA_Dali -0.145
  243. gendstat: Iran_GanjDareh_N Uzbekistan_Bustan_BA -1.721
  244. gendstat: Iran_GanjDareh_N Russia_MLBA_Sintashta -1.254
  245. gendstat: CHG EHG 1.745
  246. gendstat: CHG WSHG 1.899
  247. gendstat: CHG Tarim_EMBA1 0.586
  248. gendstat: CHG Russia_Samara_EBA_Yamnaya 1.905
  249. gendstat: CHG Kazakhstan_MLBA_Dali 1.992
  250. gendstat: CHG Uzbekistan_Bustan_BA 1.209
  251. gendstat: CHG Russia_MLBA_Sintashta 1.672
  252. gendstat: EHG WSHG 0.192
  253. gendstat: EHG Tarim_EMBA1 -1.383
  254. gendstat: EHG Russia_Samara_EBA_Yamnaya -0.296
  255. gendstat: EHG Kazakhstan_MLBA_Dali 0.223
  256. gendstat: EHG Uzbekistan_Bustan_BA -0.925
  257. gendstat: EHG Russia_MLBA_Sintashta -0.714
  258. gendstat: WSHG Tarim_EMBA1 -1.723
  259. gendstat: WSHG Russia_Samara_EBA_Yamnaya -0.478
  260. gendstat: WSHG Kazakhstan_MLBA_Dali 0.035
  261. gendstat: WSHG Uzbekistan_Bustan_BA -1.075
  262. gendstat: WSHG Russia_MLBA_Sintashta -0.882
  263. gendstat: Tarim_EMBA1 Russia_Samara_EBA_Yamnaya 1.223
  264. gendstat: Tarim_EMBA1 Kazakhstan_MLBA_Dali 1.475
  265. gendstat: Tarim_EMBA1 Uzbekistan_Bustan_BA 0.471
  266. gendstat: Tarim_EMBA1 Russia_MLBA_Sintashta 0.917
  267. gendstat: Russia_Samara_EBA_Yamnaya Kazakhstan_MLBA_Dali 0.580
  268. gendstat: Russia_Samara_EBA_Yamnaya Uzbekistan_Bustan_BA -0.951
  269. gendstat: Russia_Samara_EBA_Yamnaya Russia_MLBA_Sintashta -0.623
  270. gendstat: Kazakhstan_MLBA_Dali Uzbekistan_Bustan_BA -1.249
  271. gendstat: Kazakhstan_MLBA_Dali Russia_MLBA_Sintashta -1.094
  272. gendstat: Uzbekistan_Bustan_BA Russia_MLBA_Sintashta 0.518
  273.  
  274. ##end of qpAdm: 8.208 seconds cpu 1.118 Mbytes in use
  275.  
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