Advertisement
Guest User

Untitled

a guest
Mar 26th, 2019
85
0
Never
Not a member of Pastebin yet? Sign Up, it unlocks many cool features!
text 8.07 KB | None | 0 0
  1. == 2019-03-21 16:01:35,480 easyblock.py:274 INFO This is EasyBuild 3.9.0.dev0 (framework: 3.9.0.dev0, easyblocks: 3.9.0.dev0) on host nic406.
  2. == 2019-03-21 16:01:35,480 easyblock.py:280 INFO This is easyblock Tarball from module easybuild.easyblocks.generic.tarball (/dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/easybuild-easyblocks/easybuild/easyblocks/generic/tarball.py)
  3. == 2019-03-21 16:01:35,480 easyblock.py:830 INFO Build dir set to /dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/metaWRAP/1.1.5/foss-2018b-Python-2.7.15
  4. == 2019-03-21 16:01:35,480 easyblock.py:890 INFO Software install dir set to /dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/software/metaWRAP/1.1.5-foss-2018b-Python-2.7.15
  5. == 2019-03-21 16:01:35,480 easyblock.py:895 INFO Module install dir set to /dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/modules/all
  6. == 2019-03-21 16:01:35,480 easyblock.py:259 INFO Init completed for application name metaWRAP version 1.1.5
  7. == 2019-03-21 16:01:35,481 easyblock.py:2866 INFO Obtained application instance of for metaWRAP (easyblock: Tarball)
  8. == 2019-03-21 16:01:35,481 one.py:146 INFO Skipping reformatting value for parameter 'toolchain'
  9. == 2019-03-21 16:01:35,482 filetools.py:1200 INFO Creating directory /dev/shm/wapoelma/1980817/eb-wMSY7w/reprod_20190321160135_187245 (parents: True, set_gid: False, sticky: False)
  10. == 2019-03-21 16:01:35,483 easyblock.py:3036 INFO Dumped easyconfig instance to /dev/shm/wapoelma/1980817/eb-wMSY7w/reprod_20190321160135_187245/metaWRAP-1.1.5-foss-2018b-Python-2.7.15.eb
  11. == 2019-03-21 16:01:35,483 filetools.py:1200 INFO Creating directory /dev/shm/wapoelma/1980817/eb-wMSY7w/reprod_20190321160135_187245/easyblocks (parents: True, set_gid: False, sticky: False)
  12. == 2019-03-21 16:01:35,483 filetools.py:1670 INFO /dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/easybuild-easyblocks/easybuild/easyblocks/generic/tarball.py copied to /dev/shm/wapoelma/1980817/eb-wMSY7w/reprod_20190321160135_187245/easyblocks/tarball.py
  13. == 2019-03-21 16:01:35,483 easyblock.py:3051 INFO Dumped easyblock tarball.py required for reproduction to /dev/shm/wapoelma/1980817/eb-wMSY7w/reprod_20190321160135_187245/easyblocks
  14. == 2019-03-21 16:01:35,483 easyblock.py:1542 INFO Number of iterations to perform for central part of installation procedure: 1
  15. == 2019-03-21 16:01:35,483 build_log.py:252 INFO building and installing metaWRAP/1.1.5-foss-2018b-Python-2.7.15...
  16. == 2019-03-21 16:01:35,483 build_log.py:252 INFO fetching files...
  17. == 2019-03-21 16:01:35,483 easyblock.py:2649 INFO Starting fetch step
  18. == 2019-03-21 16:01:35,484 easyblock.py:2655 INFO Running method fetch_step part of step fetch
  19. == 2019-03-21 16:01:35,484 easyblock.py:1623 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version
  20. == 2019-03-21 16:01:35,484 filetools.py:394 INFO Command eb found at /dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/easybuild-framework/eb
  21. == 2019-03-21 16:01:35,493 easyblock.py:658 INFO Found file metaWRAP-1.1.5.tar.gz at /u/wapoelma/.local/easybuild/sources/m/metaWRAP/metaWRAP-1.1.5.tar.gz
  22. == 2019-03-21 16:01:35,494 easyblock.py:388 INFO Added sources: [{'path': '/u/wapoelma/.local/easybuild/sources/m/metaWRAP/metaWRAP-1.1.5.tar.gz', 'cmd': None, 'finalpath': '/dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/metaWRAP/1.1.5/foss-2018b-Python-2.7.15', 'name': 'metaWRAP-1.1.5.tar.gz', 'checksum': '4aee033cd4af0b59525dffb792c074c6948c8bfc0552645f3639a975ac78e3b7'}]
  23. == 2019-03-21 16:01:35,494 easyblock.py:1664 INFO no patches provided
  24. == 2019-03-21 16:01:35,614 easyblock.py:1674 INFO md5 checksum for /u/wapoelma/.local/easybuild/sources/m/metaWRAP/metaWRAP-1.1.5.tar.gz: c93c5fe080f454391e5e224393464719
  25. == 2019-03-21 16:01:35,620 easyblock.py:1674 INFO sha256 checksum for /u/wapoelma/.local/easybuild/sources/m/metaWRAP/metaWRAP-1.1.5.tar.gz: 4aee033cd4af0b59525dffb792c074c6948c8bfc0552645f3639a975ac78e3b7
  26. == 2019-03-21 16:01:35,620 easyblock.py:1709 INFO Checking dirs that need to be created: ['/dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/software/metaWRAP/1.1.5-foss-2018b-Python-2.7.15', '/dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/modules/all/metaWRAP', '/dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/modules/bio/metaWRAP']
  27. == 2019-03-21 16:01:35,620 filetools.py:1200 INFO Creating directory /dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/software/metaWRAP/1.1.5-foss-2018b-Python-2.7.15 (parents: True, set_gid: False, sticky: False)
  28. == 2019-03-21 16:01:35,620 filetools.py:1200 INFO Creating directory /dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/modules/all/metaWRAP (parents: True, set_gid: False, sticky: False)
  29. == 2019-03-21 16:01:35,620 filetools.py:1200 INFO Creating directory /dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/modules/bio/metaWRAP (parents: True, set_gid: False, sticky: False)
  30. == 2019-03-21 16:01:35,621 build_log.py:252 INFO creating build dir, resetting environment...
  31. == 2019-03-21 16:01:35,621 easyblock.py:2649 INFO Starting ready step
  32. == 2019-03-21 16:01:35,621 easyblock.py:2655 INFO Running method check_readiness_step part of step ready
  33. == 2019-03-21 16:01:35,622 easyblock.py:1561 INFO Setting parallelism: 4
  34. == 2019-03-21 16:01:35,670 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '')
  35. == 2019-03-21 16:01:35,670 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '')
  36. == 2019-03-21 16:01:35,671 easyblock.py:2655 INFO Running method make_builddir part of step ready
  37. == 2019-03-21 16:01:35,671 filetools.py:1200 INFO Creating directory /dev/shm/wapoelma/1980817/eb_sandbox_20190321_14-56-32_qYI91/metaWRAP/1.1.5/foss-2018b-Python-2.7.15 (parents: True, set_gid: False, sticky: False)
  38. == 2019-03-21 16:01:35,671 easyblock.py:2655 INFO Running method reset_env part of step ready
  39. == 2019-03-21 16:01:35,671 easyblock.py:2655 INFO Running method handle_iterate_opts part of step ready
  40. == 2019-03-21 16:01:35,672 build_log.py:252 INFO unpacking...
  41. == 2019-03-21 16:01:35,672 easyblock.py:2649 INFO Starting source step
  42. == 2019-03-21 16:01:35,672 easyblock.py:2655 INFO Running method checksum_step part of step source
  43. == 2019-03-21 16:01:35,678 easyblock.py:1725 INFO Checksum verification for /u/wapoelma/.local/easybuild/sources/m/metaWRAP/metaWRAP-1.1.5.tar.gz using 4aee033cd4af0b59525dffb792c074c6948c8bfc0552645f3639a975ac78e3b7 passed.
  44. == 2019-03-21 16:01:35,678 easyblock.py:2655 INFO Running method extract_step part of step source
  45. == 2019-03-21 16:01:35,678 easyblock.py:1793 INFO Unpacking source metaWRAP-1.1.5.tar.gz
  46. == 2019-03-21 16:01:35,679 run.py:141 INFO Auto-enabling streaming output of 'tar xzf /u/wapoelma/.local/easybuild/sources/m/metaWRAP/metaWRAP-1.1.5.tar.gz' command because logging to stdout is enabled
  47. == 2019-03-21 16:01:35,679 run.py:192 INFO running cmd: tar xzf /u/wapoelma/.local/easybuild/sources/m/metaWRAP/metaWRAP-1.1.5.tar.gz
  48. == 2019-03-21 16:01:35,720 build_log.py:252 INFO patching...
  49. == 2019-03-21 16:01:35,721 easyblock.py:2649 INFO Starting patch step
  50. == 2019-03-21 16:01:35,721 easyblock.py:2655 INFO Running method patch_step part of step patch
  51. == 2019-03-21 16:01:35,721 build_log.py:252 INFO preparing...
  52. == 2019-03-21 16:01:35,721 easyblock.py:2649 INFO Starting prepare step
  53. == 2019-03-21 16:01:35,721 easyblock.py:2655 INFO Running method prepare_step part of step prepare
  54. == 2019-03-21 16:01:36,295 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '')
  55. == 2019-03-21 16:01:36,295 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '')
  56. == 2019-03-21 16:01:36,763 build_log.py:163 ERROR EasyBuild crashed with an error (at ?:124 in __init__): Missing modules for dependencies (use --robot?): Salmon/0.12.0-foss-2018b (at easybuild/tools/toolchain/toolchain.py:420 in _check_dependencies)
  57. == 2019-03-21 16:01:36,764 easyblock.py:2896 WARNING build failed (first 300 chars): Missing modules for dependencies (use --robot?): Salmon/0.12.0-foss-2018b
  58. == 2019-03-21 16:01:36,764 easyblock.py:289 INFO Closing log for application name metaWRAP version 1.1.5
Advertisement
Add Comment
Please, Sign In to add comment
Advertisement