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  1. java -Xmx4G -jar picard.jar AddOrReplaceReadGroups
  2. I=$SNIC_TMP/WCRO84_S23_L005.bam
  3. O=WCRO84_S23_L005.bam
  4. RGID=WCRO84_S23_L005
  5. RGLB=WCRO84
  6. RGPL=illumina
  7. RGPU=WCRO84_S23_L005
  8. RGSM=WCRO84
  9.  
  10. java -Xmx4G -jar picard.jar AddOrReplaceReadGroups
  11. I=$SNIC_TMP/WCRO84_S23_L005.bam
  12. O=WCRO84_S23_L005.bam
  13. RGID=WCRO84_S23_L005
  14. RGLB=WCRO84_S23_L005
  15. RGPL=illumina
  16. RGPU=WCRO84_S23_L005
  17. RGSM=WCRO84_S23_L005
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