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Apr 30th, 2013
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  1. > reps = c("http://ftp.sunet.se/pub/lang/CRAN",
  2. +          "http://cran.gforge.se")
  3. > install.packages("Gmisc", repos=reps, dependencies=TRUE, type="source")
  4. also installing the dependencies ‘miscTools’, ‘rms’, ‘testthat’, ‘cmprsk’
  5.  
  6. trying URL 'http://ftp.sunet.se/pub/lang/CRAN/src/contrib/miscTools_0.6-16.tar.gz'
  7. Content type 'application/x-gzip' length 17377 bytes (16 Kb)
  8. opened URL
  9. ==================================================
  10. downloaded 16 Kb
  11.  
  12. trying URL 'http://ftp.sunet.se/pub/lang/CRAN/src/contrib/rms_3.6-3.tar.gz'
  13. Content type 'application/x-gzip' length 374286 bytes (365 Kb)
  14. opened URL
  15. ==================================================
  16. downloaded 365 Kb
  17.  
  18. trying URL 'http://ftp.sunet.se/pub/lang/CRAN/src/contrib/testthat_0.7.1.tar.gz'
  19. Content type 'application/x-gzip' length 26806 bytes (26 Kb)
  20. opened URL
  21. ==================================================
  22. downloaded 26 Kb
  23.  
  24. trying URL 'http://ftp.sunet.se/pub/lang/CRAN/src/contrib/cmprsk_2.2-6.tar.gz'
  25. Content type 'application/x-gzip' length 35012 bytes (34 Kb)
  26. opened URL
  27. ==================================================
  28. downloaded 34 Kb
  29.  
  30. trying URL 'http://cran.gforge.se/src/contrib/Gmisc_0.5.0.1.tar.gz'
  31. Content type 'application/x-gzip' length 80980 bytes (79 Kb)
  32. opened URL
  33. ==================================================
  34. downloaded 79 Kb
  35.  
  36. * installing *source* package ‘miscTools’ ...
  37. ** package ‘miscTools’ successfully unpacked and MD5 sums checked
  38. ** R
  39. ** preparing package for lazy loading
  40. ** help
  41. *** installing help indices
  42. ** building package indices
  43. ** testing if installed package can be loaded
  44. * DONE (miscTools)
  45. * installing *source* package ‘rms’ ...
  46. ** package ‘rms’ successfully unpacked and MD5 sums checked
  47. ** libs
  48. gfortran-4.2 -arch x86_64   -fPIC  -g -O2  -c lrmfit.f -o lrmfit.o
  49. make: gfortran-4.2: No such file or directory
  50. make: *** [lrmfit.o] Error 1
  51. ERROR: compilation failed for package ‘rms’
  52. * removing ‘/Library/Frameworks/R.framework/Versions/3.0/Resources/library/rms’
  53. * installing *source* package ‘testthat’ ...
  54. ** package ‘testthat’ successfully unpacked and MD5 sums checked
  55. ** R
  56. ** inst
  57. ** preparing package for lazy loading
  58. ** help
  59. *** installing help indices
  60. ** building package indices
  61. ** testing if installed package can be loaded
  62. * DONE (testthat)
  63. * installing *source* package ‘cmprsk’ ...
  64. ** package ‘cmprsk’ successfully unpacked and MD5 sums checked
  65. ** libs
  66. gfortran-4.2 -arch x86_64   -fPIC  -g -O2  -c cincsub.f -o cincsub.o
  67. make: gfortran-4.2: No such file or directory
  68. make: *** [cincsub.o] Error 1
  69. ERROR: compilation failed for package ‘cmprsk’
  70. * removing ‘/Library/Frameworks/R.framework/Versions/3.0/Resources/library/cmprsk’
  71. ERROR: dependency ‘rms’ is not available for package ‘Gmisc’
  72. * removing ‘/Library/Frameworks/R.framework/Versions/3.0/Resources/library/Gmisc’
  73.  
  74. The downloaded source packages are in
  75.     ‘/private/var/folders/17/mzkrb81d57566t_t81wfyw6m0000gn/T/RtmpsudWf8/downloaded_packages’
  76. Warning messages:
  77. 1: In install.packages("Gmisc", repos = reps, dependencies = TRUE,  :
  78.   installation of package ‘rms’ had non-zero exit status
  79. 2: In install.packages("Gmisc", repos = reps, dependencies = TRUE,  :
  80.   installation of package ‘cmprsk’ had non-zero exit status
  81. 3: In install.packages("Gmisc", repos = reps, dependencies = TRUE,  :
  82.   installation of package ‘Gmisc’ had non-zero exit status
  83. > library(Gmisc)
  84. Error in library(Gmisc) : there is no package called ‘Gmisc’
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