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- TYPE text text text integer text float float text integer text text integer integer integer integer float float float float float float text text text text text text text text text text text integer integer integer
- FEPARAMS Protocol_Name Protocol_date Scan_ScannerName Scan_NumChannels Scan_Date Scan_MicronsPerPixelX Scan_MicronsPerPixelY Scan_OriginalGUID Scan_NumScanPass Grid_Name Grid_Date Grid_NumSubGridRows Grid_NumSubGridCols Grid_NumRows Grid_NumCols Grid_RowSpacing Grid_ColSpacing Grid_OffsetX Grid_OffsetY Grid_NomSpotWidth Grid_NomSpotHeight Grid_GenomicBuild FeatureExtractor_Barcode FeatureExtractor_Sample FeatureExtractor_ScanFileName FeatureExtractor_ArrayName FeatureExtractor_ScanFileGUID FeatureExtractor_DesignFileName FeatureExtractor_ExtractionTime FeatureExtractor_UserName FeatureExtractor_ComputerName FeatureExtractor_Version FeatureExtractor_IsXDRExtraction FeatureExtractor_ColorMode FeatureExtractor_QCReportType
- DATA miRNA_107_Sep09 (Read Only) 29-Sep-2009 12:14 Agilent Technologies Scanner G2505C US10133796 1 07-09-2014 15:59:08 3 3 9fa6daa0-31fc-4d0e-8222-a4019c10f815 1 046064_D_F_20121223 23-Dec-2012 00:00 1 1 384 164 36.6617 31.745 0 18.3309 30 30 hg19:GRCh37:Feb2009 254606412513_1_2 D:\ScanData\Tukuruk\140709\80\\US10133796_254606412513_S01.tif US10133796_254606412513_S01 0da40ae4-2ec3-4ef3-92c7-01db11da452f 046064_D_F_20121223.xml 09-Jul-2014 16:02:12 Administrator DEMO 10.7.3.1 0 0 2
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- TYPE float float float integer integer float float float integer float float float integer float float integer integer integer integer integer float float float integer float float float float float integer integer float float float float float integer float float float float integer float float float float float integer float float float float float float float integer float integer float float float float integer float float text float float float float float float float float integer integer integer integer float float float integer float integer text float float integer float float float float float float boolean float float boolean float boolean float boolean float boolean float boolean float boolean float boolean float boolean
- STATS gDarkOffsetAverage gDarkOffsetMedian gDarkOffsetStdDev gDarkOffsetNumPts gSaturationValue gAvgSig2BkgeQC gAvgSig2BkgNegCtrl gRatioSig2BkgeQC_NegCtrl gNumSatFeat gLocalBGInlierNetAve gLocalBGInlierAve gLocalBGInlierSDev gLocalBGInlierNum gGlobalBGInlierAve gGlobalBGInlierSDev gGlobalBGInlierNum gNumFeatureNonUnifOL gNumPopnOL gNumNonUnifBGOL gNumPopnBGOL gOffsetUsed gGlobalFeatInlierAve gGlobalFeatInlierSDev gGlobalFeatInlierNum AnyColorPrcntFeatNonUnifOL AnyColorPrcntBGNonUnifOL AnyColorPrcntFeatPopnOL AnyColorPrcntBGPopnOL TotalPrcntFeatOL gNumNegBGSubFeat gNonCtrlNumNegFeatBGSubSig gSpatialDetrendRMSFit gSpatialDetrendRMSFilteredMinusFit gSpatialDetrendSurfaceArea gSpatialDetrendVolume gSpatialDetrendAveFit gNonCtrlNumSatFeat gNonCtrl99PrcntNetSig gNonCtrl50PrcntNetSig gNonCtrl1PrcntNetSig gNonCtrlMedPrcntCVBGSubSig gCtrleQCNumSatFeat gCtrleQC99PrcntNetSig gCtrleQC50PrcntNetSig gCtrleQC1PrcntNetSig geQCMedPrcntCVBGSubSig geQCSig2BkgLow2 gNegCtrlNumInliers gNegCtrlAveNetSig gNegCtrlSDevNetSig gNegCtrlAveBGSubSig gNegCtrlSDevBGSubSig gAveNumPixOLLo gAveNumPixOLHi gPixCVofHighSignalFeat gNumHighSignalFeat AddErrorEstimateGreen TotalNumFeatures ROIHeight ROIWidth CentroidDiffX CentroidDiffY NumFoundFeat MaxNonUnifEdges MaxSpotNotFoundEdges eQCLowSigName2 gNonCtrl50PrcntBGSubSig gCtrleQC50PrcntBGSubSig gOutlierFlagger_Auto_FeatB_Term gOutlierFlagger_Auto_FeatC_Term gOutlierFlagger_Auto_BgndB_Term gOutlierFlagger_Auto_BgndC_Term OutlierFlagger_FeatChiSq OutlierFlagger_BgndChiSq GriddingStatus IsGoodGrid NumGeneNonUnifOL TotalNumberOfReplicatedGenes gMultDetrendMeanSignalDifference EffectiveFeatureSizeFraction FeatureUniformityAnomalyFraction UsedDefaultEffectiveFeatureSize gPercentileIntensityProcessedSignal ExtractionStatus QCMetricResults gTotalSignal99pctile gTotalSignal75pctile gNonCtrlNumWellAboveBG gdmr285GeneSignal gdmr31aGeneSignal gdmr6GeneSignal gdmr3GeneSignal gdmr6ProbeRatio gdmr3ProbeRatio GridHasBeenOptimized gNegCtrlSpread Metric_IsGoodGrid Metric_IsGoodGrid_IsInRange Metric_AddErrorEstimateGreen Metric_AddErrorEstimateGreen_IsInRange Metric_AnyColorPrcntFeatPopnOL Metric_AnyColorPrcntFeatPopnOL_IsInRange Metric_gNonCtrlMedPrcntCVBGSubSig Metric_gNonCtrlMedPrcntCVBGSubSig_IsInRange Metric_gTotalSignal75pctile Metric_gTotalSignal75pctile_IsInRange Metric_LabelingSpike-InSignal Metric_LabelingSpike-InSignal_IsInRange Metric_HybSpike-InSignal Metric_HybSpike-InSignal_IsInRange Metric_StringencySpike-InRatio Metric_StringencySpike-InRatio_IsInRange
- DATA 7.72655 7.72655 3.29326 0 777290 114.807 2.43245 47.1981 0 11.8818 19.6083 1.44555 62344 19.6083 1.44555 62344 2 1706 0 0 7.72655 79.1914 381.531 60638 0.00320801 0 2.73643 0 0.00332336 30219 29771 0.889504 2.13108 1.00002 1.26971 33.187 0 774.705 25.5007 19.8189 7.74895 0 8960.73 1952.22 668.971 3.28118 28.4593 986 28.3831 2.0841 2.93536 2.02091 0.179071 0.722844 0 0 2.13108 62344 3.71314 6.34842 0.921633 0.710092 59596 0 0.131098 dmr_285_18 0.0430926 1927.68 693.636 58.8187 55.4291 31.7379 2.29919 1.28049 0 1 0 4774 0 0.828911 1 0 3.4486 0 ExtractionInRange 445.259 0.1 8538 3.51111 3.2153 3.58207 3.97108 0.754071 1.22897 0 6.28183 1 1 2.13108 1 2.73643 1 7.74895 1 0.1 1 3.3632 1 3.77658 1 1.22897 1
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- TYPE integer integer integer integer integer text text float float float float float float float boolean boolean boolean boolean boolean boolean float boolean boolean float float float float float float boolean
- FEATURES FeatureNum Row Col SubTypeMask ControlType ProbeName SystematicName PositionX PositionY gProcessedSignal gProcessedSigError gMedianSignal gBGMedianSignal gBGPixSDev gIsSaturated gIsFeatNonUnifOL gIsBGNonUnifOL gIsFeatPopnOL gIsBGPopnOL IsManualFlag gBGSubSignal gIsPosAndSignif gIsWellAboveBG SpotExtentX gBGMeanSignal gTotalProbeSignal gTotalProbeError gTotalGeneSignal gTotalGeneError gIsGeneDetected
- DATA 1 1 1 0 1 miRNABrightCorner30 miRNABrightCorner30 5889.97 465.588 1.865756e+002 1.877887e+001 223.5 17 5.484242e+000 0 0 0 1 0 0 186.576 1 1 26.8687 17.0277 993.25 100.829 993.25 100.829 1
- DATA 2 1 2 0 1 Blank Blank 5911 465.5 -1.488655e+001 2.131084e+000 18 17 5.459987e+000 0 0 0 0 0 0 -14.8866 0 0 30 17.012 -101.775 13.4022 0.1 1 0
- DATA 3 1 3 0 1 Blank Blank 5932 465.5 -1.596166e+001 2.131084e+000 16 17 5.502248e+000 0 0 0 0 0 0 -15.9617 0 0 30 17.0844 -101.775 13.4022 0.1 1 0
- DATA 4 1 4 0 1 Blank Blank 5953.22 465.478 -1.555838e+001 2.131084e+000 17 17 5.488457e+000 0 0 0 0 0 0 -15.5584 0 0 27.0811 17.1062 -101.775 13.4022 0.1 1 0
- DATA 5 1 5 0 1 Blank Blank 5974.4 465.414 -1.366523e+001 2.131084e+000 18 17 5.401098e+000 0 0 0 0 0 0 -13.6652 0 0 30 16.9651 -101.775 13.4022 0.1 1 0
- DATA 6 1 6 0 1 Blank Blank 5995.5 465.324 -1.609236e+001 2.131084e+000 16 16 5.401615e+000 0 0 0 0 0 0 -16.0924 0 0 30 16.8839 -101.775 13.4022 0.1 1 0
- DATA 7 1 7 0 1 Blank Blank 6016.71 465.5 -1.416782e+001 2.131084e+000 17.5 17 5.437483e+000 0 0 0 0 0 0 -14.1678 0 0 30 16.8286 -101.775 13.4022 0.1 1 0
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