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Bug with graph database in Sage

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  1. sage-main$ sage -tp 8 -long sage/graphs
  2. Detected SAGE64 flag
  3. Building Sage on OS X in 64-bit mode
  4. Testing that Sage starts...
  5. Building Sage on OS X in 64-bit mode
  6. Creating SAGE_LOCAL/lib/sage-64.txt since it does not exist
  7. Detected SAGE64 flag
  8. Building Sage on OS X in 64-bit mode
  9. Yes, Sage starts.
  10. Global iterations: 1
  11. File iterations: 1
  12. Using long cached timings to run longest doctests first.
  13. Doctesting 36 files doing 8 jobs in parallel
  14. sage -t -long sage/graphs/digraph.py
  15. [9.4 s]
  16. sage -t -long sage/graphs/digraph_generators.py
  17. [13.2 s]
  18. sage -t -long sage/graphs/graph_coloring.py
  19. [15.3 s]
  20. sage -t -long sage/graphs/generic_graph_pyx.pyx
  21. [8.6 s]
  22. sage -t -long sage/graphs/graph_plot.py
  23. [19.2 s]
  24. sage -t -long sage/graphs/base/c_graph.pyx
  25. [7.4 s]
  26. sage -t -long sage/graphs/trees.pyx
  27. [7.3 s]
  28. sage -t -long sage/graphs/bipartite_graph.py
  29. [5.7 s]
  30. sage -t -long sage/graphs/planarity.pyx
  31. [5.0 s]
  32. sage -t -long sage/graphs/genus.pyx
  33. [24.8 s]
  34. sage -t -long sage/graphs/base/dense_graph.pyx
  35. [4.4 s]
  36. sage -t -long sage/graphs/base/sparse_graph.pyx
  37. [4.0 s]
  38. sage -t -long sage/graphs/cliquer.pyx
  39. [3.2 s]
  40. sage -t -long sage/graphs/graph_latex.py
  41. [3.1 s]
  42. sage -t -long sage/graphs/spanning_tree.pyx
  43. [2.8 s]
  44. sage -t -long sage/graphs/base/graph_backends.py
  45. [2.9 s]
  46. sage -t -long sage/graphs/chrompoly.pyx
  47. [28.3 s]
  48. sage -t -long sage/graphs/dot2tex_utils.py
  49. [2.6 s]
  50. sage -t -long sage/graphs/linearextensions.py
  51. [3.0 s]
  52. sage -t -long sage/graphs/schnyder.py
  53. [3.1 s]
  54. sage -t -long sage/graphs/modular_decomposition/__init__.py
  55. [0.1 s]
  56. sage -t -long sage/graphs/graph_editor.py
  57. [2.9 s]
  58. sage -t -long sage/graphs/all.py
  59. [0.1 s]
  60. sage -t -long sage/graphs/__init__.py
  61. [0.1 s]
  62. sage -t -long sage/graphs/base/__init__.py
  63. [0.1 s]
  64. sage -t -long sage/graphs/base/all.py
  65. [0.1 s]
  66. sage -t -long sage/graphs/graph_bundle.py
  67. [3.0 s]
  68. sage -t -long sage/graphs/print_graphs.py
  69. [2.8 s]
  70. sage -t -long sage/graphs/pq_trees.py
  71. [2.9 s]
  72. sage -t -long sage/graphs/modular_decomposition/modular_decomposition.pyx
  73. [3.0 s]
  74. sage -t -long sage/graphs/graph_database.py
  75. **********************************************************************
  76. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 639:
  77. sage: Q = GraphQuery(display_cols=['graph6','num_vertices','degree_sequence'],num_edges=['<=',5],min_degree=1)
  78. Exception raised:
  79. Traceback (most recent call last):
  80. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  81. self.run_one_example(test, example, filename, compileflags)
  82. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  83. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  84. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  85. compileflags, 1) in test.globs
  86. File "<doctest __main__.example_10[2]>", line 1, in <module>
  87. Q = GraphQuery(display_cols=['graph6','num_vertices','degree_sequence'],num_edges=['<=',Integer(5)],min_degree=Integer(1))###line 639:
  88. sage: Q = GraphQuery(display_cols=['graph6','num_vertices','degree_sequence'],num_edges=['<=',5],min_degree=1)
  89. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  90. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  91. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  92. raise ValueError("Database has no table %s."%query_dict['table_name'])
  93. ValueError: Database has no table degrees.
  94. **********************************************************************
  95. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 640:
  96. sage: L = Q.get_graphs_list()
  97. Exception raised:
  98. Traceback (most recent call last):
  99. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  100. self.run_one_example(test, example, filename, compileflags)
  101. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  102. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  103. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  104. compileflags, 1) in test.globs
  105. File "<doctest __main__.example_10[3]>", line 1, in <module>
  106. L = Q.get_graphs_list()###line 640:
  107. sage: L = Q.get_graphs_list()
  108. NameError: name 'Q' is not defined
  109. **********************************************************************
  110. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 641:
  111. sage: L[0]
  112. Exception raised:
  113. Traceback (most recent call last):
  114. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  115. self.run_one_example(test, example, filename, compileflags)
  116. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  117. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  118. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  119. compileflags, 1) in test.globs
  120. File "<doctest __main__.example_10[4]>", line 1, in <module>
  121. L[Integer(0)]###line 641:
  122. sage: L[0]
  123. NameError: name 'L' is not defined
  124. **********************************************************************
  125. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 643:
  126. sage: len(L)
  127. Exception raised:
  128. Traceback (most recent call last):
  129. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  130. self.run_one_example(test, example, filename, compileflags)
  131. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  132. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  133. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  134. compileflags, 1) in test.globs
  135. File "<doctest __main__.example_10[5]>", line 1, in <module>
  136. len(L)###line 643:
  137. sage: len(L)
  138. NameError: name 'L' is not defined
  139. **********************************************************************
  140. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 661:
  141. sage: Q = GraphQuery(display_cols=['graph6','num_vertices','degree_sequence'],num_edges=['<=',5],min_degree=1)
  142. Exception raised:
  143. Traceback (most recent call last):
  144. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  145. self.run_one_example(test, example, filename, compileflags)
  146. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  147. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  148. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  149. compileflags, 1) in test.globs
  150. File "<doctest __main__.example_11[2]>", line 1, in <module>
  151. Q = GraphQuery(display_cols=['graph6','num_vertices','degree_sequence'],num_edges=['<=',Integer(5)],min_degree=Integer(1))###line 661:
  152. sage: Q = GraphQuery(display_cols=['graph6','num_vertices','degree_sequence'],num_edges=['<=',5],min_degree=1)
  153. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  154. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  155. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  156. raise ValueError("Database has no table %s."%query_dict['table_name'])
  157. ValueError: Database has no table degrees.
  158. **********************************************************************
  159. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 662:
  160. sage: Q.number_of()
  161. Exception raised:
  162. Traceback (most recent call last):
  163. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  164. self.run_one_example(test, example, filename, compileflags)
  165. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  166. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  167. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  168. compileflags, 1) in test.globs
  169. File "<doctest __main__.example_11[3]>", line 1, in <module>
  170. Q.number_of()###line 662:
  171. sage: Q.number_of()
  172. NameError: name 'Q' is not defined
  173. **********************************************************************
  174. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 710:
  175. sage: G.get_skeleton()
  176. Expected:
  177. {u'aut_grp': {u'edge_transitive': {'index': True, 'primary_key': False, 'sql': u'BOOLEAN'}, u'vertex_transitive': {'index': True, 'primary_key': False, 'sql': u'BOOLEAN'}, u'aut_grp_size': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'graph_id': {'index': False, 'primary_key': False, 'sql': u'INTEGER'}, u'num_orbits': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'num_fixed_points': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}}, u'degrees': {u'graph_id': {'index': False, 'primary_key': False, 'sql': u'INTEGER'}, u'degrees_sd': {'index': True, 'primary_key': False, 'sql': u'REAL'}, u'max_degree': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'regular': {'index': True, 'primary_key': False, 'sql': u'BOOLEAN'}, u'average_degree': {'index': True, 'primary_key': False, 'sql': u'REAL'}, u'degree_sequence': {'index': False, 'primary_key': False, 'sql': u'INTEGER'}, u'min_degree': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}}, u'spectrum': {u'max_eigenvalue': {'index': True, 'primary_key': False, 'sql': u'REAL'}, u'energy': {'index': True, 'primary_key': False, 'sql': u'REAL'}, u'spectrum': {'index': False, 'primary_key': False, 'sql': u'TEXT'}, u'eigenvalues_sd': {'index': True, 'primary_key': False, 'sql': u'REAL'}, u'graph_id': {'index': False, 'primary_key': False, 'sql': u'INTEGER'}, u'min_eigenvalue': {'index': True, 'primary_key': False, 'sql': u'REAL'}}, u'misc': {u'diameter': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'vertex_connectivity': {'index': True, 'primary_key': False, 'sql': u'BOOLEAN'}, u'graph_id': {'index': False, 'primary_key': False, 'sql': u'INTEGER'}, u'num_components': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'min_vertex_cover_size': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'edge_connectivity': {'index': True, 'primary_key': False, 'sql': u'BOOLEAN'}, u'num_spanning_trees': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'induced_subgraphs': {'index': True, 'primary_key': False, 'sql': u'TEXT'}, u'radius': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'num_cut_vertices': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'clique_number': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'independence_number': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'girth': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}}, u'graph_data': {u'perfect': {'index': True, 'primary_key': False, 'sql': u'BOOLEAN'}, u'planar': {'index': True, 'primary_key': False, 'sql': u'BOOLEAN'}, u'graph_id': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'complement_graph6': {'index': True, 'primary_key': False, 'sql': u'TEXT'}, u'num_edges': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'num_cycles': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'graph6': {'index': True, 'primary_key': False, 'sql': u'TEXT'}, u'num_hamiltonian_cycles': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}, u'lovasz_number': {'index': True, 'primary_key': False, 'sql': u'REAL'}, u'eulerian': {'index': True, 'primary_key': False, 'sql': u'BOOLEAN'}, u'num_vertices': {'index': True, 'primary_key': False, 'sql': u'INTEGER'}}}
  178. Got:
  179. {}
  180. **********************************************************************
  181. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 758:
  182. sage: q = D.query(display_cols=['graph6','num_vertices','degree_sequence'],num_edges=['<=',5])
  183. Exception raised:
  184. Traceback (most recent call last):
  185. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  186. self.run_one_example(test, example, filename, compileflags)
  187. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  188. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  189. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  190. compileflags, 1) in test.globs
  191. File "<doctest __main__.example_15[3]>", line 1, in <module>
  192. q = D.query(display_cols=['graph6','num_vertices','degree_sequence'],num_edges=['<=',Integer(5)])###line 758:
  193. sage: q = D.query(display_cols=['graph6','num_vertices','degree_sequence'],num_edges=['<=',5])
  194. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 873, in query
  195. return GraphQuery(self, query_dict, display_cols, **kwds)
  196. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  197. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  198. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  199. raise ValueError("Database has no table %s."%query_dict['table_name'])
  200. ValueError: Database has no table graph_data.
  201. **********************************************************************
  202. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 759:
  203. sage: q.show()
  204. Exception raised:
  205. Traceback (most recent call last):
  206. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  207. self.run_one_example(test, example, filename, compileflags)
  208. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  209. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  210. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  211. compileflags, 1) in test.globs
  212. File "<doctest __main__.example_15[4]>", line 1, in <module>
  213. q.show()###line 759:
  214. sage: q.show()
  215. NameError: name 'q' is not defined
  216. **********************************************************************
  217. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 133:
  218. sage: q = subgraphs_to_query(['all_of','A?','B?','C?'],gd)
  219. Exception raised:
  220. Traceback (most recent call last):
  221. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  222. self.run_one_example(test, example, filename, compileflags)
  223. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  224. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  225. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  226. compileflags, 1) in test.globs
  227. File "<doctest __main__.example_4[4]>", line 1, in <module>
  228. q = subgraphs_to_query(['all_of','A?','B?','C?'],gd)###line 133:
  229. sage: q = subgraphs_to_query(['all_of','A?','B?','C?'],gd)
  230. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 137, in subgraphs_to_query
  231. q = GraphQuery(graph_db=db,induced_subgraphs=subgraphs[1])
  232. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  233. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  234. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  235. raise ValueError("Database has no table %s."%query_dict['table_name'])
  236. ValueError: Database has no table misc.
  237. **********************************************************************
  238. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 134:
  239. sage: q.get_query_string()
  240. Exception raised:
  241. Traceback (most recent call last):
  242. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  243. self.run_one_example(test, example, filename, compileflags)
  244. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  245. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  246. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  247. compileflags, 1) in test.globs
  248. File "<doctest __main__.example_4[5]>", line 1, in <module>
  249. q.get_query_string()###line 134:
  250. sage: q.get_query_string()
  251. NameError: name 'q' is not defined
  252. **********************************************************************
  253. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 276:
  254. sage: Q.show()
  255. Exception raised:
  256. Traceback (most recent call last):
  257. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  258. self.run_one_example(test, example, filename, compileflags)
  259. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  260. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  261. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  262. compileflags, 1) in test.globs
  263. File "<doctest __main__.example_6[8]>", line 1, in <module>
  264. Q.show()###line 276:
  265. sage: Q.show()
  266. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 719, in show
  267. raise RuntimeError('Failure to fetch query.')
  268. RuntimeError: Failure to fetch query.
  269. **********************************************************************
  270. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 337:
  271. sage: Q = GraphQuery(display_cols=['graph6','num_vertices','degree_sequence'],num_edges=['<=',5],min_degree=1)
  272. Exception raised:
  273. Traceback (most recent call last):
  274. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  275. self.run_one_example(test, example, filename, compileflags)
  276. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  277. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  278. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  279. compileflags, 1) in test.globs
  280. File "<doctest __main__.example_7[2]>", line 1, in <module>
  281. Q = GraphQuery(display_cols=['graph6','num_vertices','degree_sequence'],num_edges=['<=',Integer(5)],min_degree=Integer(1))###line 337:
  282. sage: Q = GraphQuery(display_cols=['graph6','num_vertices','degree_sequence'],num_edges=['<=',5],min_degree=1)
  283. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  284. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  285. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  286. raise ValueError("Database has no table %s."%query_dict['table_name'])
  287. ValueError: Database has no table degrees.
  288. **********************************************************************
  289. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 338:
  290. sage: Q.number_of()
  291. Exception raised:
  292. Traceback (most recent call last):
  293. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  294. self.run_one_example(test, example, filename, compileflags)
  295. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  296. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  297. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  298. compileflags, 1) in test.globs
  299. File "<doctest __main__.example_7[3]>", line 1, in <module>
  300. Q.number_of()###line 338:
  301. sage: Q.number_of()
  302. NameError: name 'Q' is not defined
  303. **********************************************************************
  304. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 340:
  305. sage: Q.show()
  306. Exception raised:
  307. Traceback (most recent call last):
  308. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  309. self.run_one_example(test, example, filename, compileflags)
  310. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  311. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  312. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  313. compileflags, 1) in test.globs
  314. File "<doctest __main__.example_7[4]>", line 1, in <module>
  315. Q.show()###line 340:
  316. sage: Q.show()
  317. NameError: name 'Q' is not defined
  318. **********************************************************************
  319. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 485:
  320. sage: Q = GraphQuery(display_cols=['graph6'],num_vertices=7, diameter=5)
  321. Exception raised:
  322. Traceback (most recent call last):
  323. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  324. self.run_one_example(test, example, filename, compileflags)
  325. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  326. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  327. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  328. compileflags, 1) in test.globs
  329. File "<doctest __main__.example_8[2]>", line 1, in <module>
  330. Q = GraphQuery(display_cols=['graph6'],num_vertices=Integer(7), diameter=Integer(5))###line 485:
  331. sage: Q = GraphQuery(display_cols=['graph6'],num_vertices=7, diameter=5)
  332. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  333. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  334. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  335. raise ValueError("Database has no table %s."%query_dict['table_name'])
  336. ValueError: Database has no table misc.
  337. **********************************************************************
  338. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 486:
  339. sage: for g in Q:
  340. print g.graph6_string()
  341. Exception raised:
  342. Traceback (most recent call last):
  343. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  344. self.run_one_example(test, example, filename, compileflags)
  345. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  346. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  347. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  348. compileflags, 1) in test.globs
  349. File "<doctest __main__.example_8[3]>", line 1, in <module>
  350. for g in Q:###line 486:
  351. sage: for g in Q:
  352. NameError: name 'Q' is not defined
  353. **********************************************************************
  354. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 498:
  355. sage: Q = GraphQuery(display_cols=['graph6'],num_vertices=7, diameter=5)
  356. Exception raised:
  357. Traceback (most recent call last):
  358. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  359. self.run_one_example(test, example, filename, compileflags)
  360. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  361. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  362. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  363. compileflags, 1) in test.globs
  364. File "<doctest __main__.example_8[4]>", line 1, in <module>
  365. Q = GraphQuery(display_cols=['graph6'],num_vertices=Integer(7), diameter=Integer(5))###line 498:
  366. sage: Q = GraphQuery(display_cols=['graph6'],num_vertices=7, diameter=5)
  367. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  368. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  369. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  370. raise ValueError("Database has no table %s."%query_dict['table_name'])
  371. ValueError: Database has no table misc.
  372. **********************************************************************
  373. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 499:
  374. sage: it = iter(Q)
  375. Exception raised:
  376. Traceback (most recent call last):
  377. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  378. self.run_one_example(test, example, filename, compileflags)
  379. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  380. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  381. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  382. compileflags, 1) in test.globs
  383. File "<doctest __main__.example_8[5]>", line 1, in <module>
  384. it = iter(Q)###line 499:
  385. sage: it = iter(Q)
  386. NameError: name 'Q' is not defined
  387. **********************************************************************
  388. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 500:
  389. sage: while True:
  390. try: print it.next().graph6_string()
  391. except StopIteration: break
  392. Exception raised:
  393. Traceback (most recent call last):
  394. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  395. self.run_one_example(test, example, filename, compileflags)
  396. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  397. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  398. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  399. compileflags, 1) in test.globs
  400. File "<doctest __main__.example_8[6]>", line 2, in <module>
  401. try: print it.next().graph6_string()
  402. NameError: name 'it' is not defined
  403. **********************************************************************
  404. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 536:
  405. sage: Q = GraphQuery(G, display_cols=['graph6','num_vertices','aut_grp_size'], num_vertices=4, aut_grp_size=4)
  406. Exception raised:
  407. Traceback (most recent call last):
  408. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  409. self.run_one_example(test, example, filename, compileflags)
  410. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  411. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  412. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  413. compileflags, 1) in test.globs
  414. File "<doctest __main__.example_9[3]>", line 1, in <module>
  415. Q = GraphQuery(G, display_cols=['graph6','num_vertices','aut_grp_size'], num_vertices=Integer(4), aut_grp_size=Integer(4))###line 536:
  416. sage: Q = GraphQuery(G, display_cols=['graph6','num_vertices','aut_grp_size'], num_vertices=4, aut_grp_size=4)
  417. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  418. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  419. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  420. raise ValueError("Database has no table %s."%query_dict['table_name'])
  421. ValueError: Database has no table aut_grp.
  422. **********************************************************************
  423. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 537:
  424. sage: Q.show()
  425. Exception raised:
  426. Traceback (most recent call last):
  427. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  428. self.run_one_example(test, example, filename, compileflags)
  429. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  430. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  431. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  432. compileflags, 1) in test.globs
  433. File "<doctest __main__.example_9[4]>", line 1, in <module>
  434. Q.show()###line 537:
  435. sage: Q.show()
  436. NameError: name 'Q' is not defined
  437. **********************************************************************
  438. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 545:
  439. sage: R = GraphQuery(G, display_cols=['graph6','num_vertices','degree_sequence'], num_vertices=4)
  440. Exception raised:
  441. Traceback (most recent call last):
  442. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  443. self.run_one_example(test, example, filename, compileflags)
  444. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  445. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  446. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  447. compileflags, 1) in test.globs
  448. File "<doctest __main__.example_9[5]>", line 1, in <module>
  449. R = GraphQuery(G, display_cols=['graph6','num_vertices','degree_sequence'], num_vertices=Integer(4))###line 545:
  450. sage: R = GraphQuery(G, display_cols=['graph6','num_vertices','degree_sequence'], num_vertices=4)
  451. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  452. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  453. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  454. raise ValueError("Database has no table %s."%query_dict['table_name'])
  455. ValueError: Database has no table graph_data.
  456. **********************************************************************
  457. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 546:
  458. sage: R.show()
  459. Exception raised:
  460. Traceback (most recent call last):
  461. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  462. self.run_one_example(test, example, filename, compileflags)
  463. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  464. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  465. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  466. compileflags, 1) in test.globs
  467. File "<doctest __main__.example_9[6]>", line 1, in <module>
  468. R.show()###line 546:
  469. sage: R.show()
  470. AttributeError: type object 'R' has no attribute 'show'
  471. **********************************************************************
  472. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 563:
  473. sage: S = GraphQuery(G, display_cols=['graph6','aut_grp_size'], num_vertices=4)
  474. Exception raised:
  475. Traceback (most recent call last):
  476. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  477. self.run_one_example(test, example, filename, compileflags)
  478. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  479. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  480. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  481. compileflags, 1) in test.globs
  482. File "<doctest __main__.example_9[7]>", line 1, in <module>
  483. S = GraphQuery(G, display_cols=['graph6','aut_grp_size'], num_vertices=Integer(4))###line 563:
  484. sage: S = GraphQuery(G, display_cols=['graph6','aut_grp_size'], num_vertices=4)
  485. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  486. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  487. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  488. raise ValueError("Database has no table %s."%query_dict['table_name'])
  489. ValueError: Database has no table graph_data.
  490. **********************************************************************
  491. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 564:
  492. sage: S.show(with_picture=True)
  493. Expected:
  494. Traceback (most recent call last):
  495. ...
  496. NotImplementedError: Cannot display plot on command line.
  497. Got:
  498. Traceback (most recent call last):
  499. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  500. self.run_one_example(test, example, filename, compileflags)
  501. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  502. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  503. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  504. compileflags, 1) in test.globs
  505. File "<doctest __main__.example_9[8]>", line 1, in <module>
  506. S.show(with_picture=True)###line 564:
  507. sage: S.show(with_picture=True)
  508. NameError: name 'S' is not defined
  509. **********************************************************************
  510. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 571:
  511. sage: S.show(with_picture=False)
  512. Exception raised:
  513. Traceback (most recent call last):
  514. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  515. self.run_one_example(test, example, filename, compileflags)
  516. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  517. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  518. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  519. compileflags, 1) in test.globs
  520. File "<doctest __main__.example_9[9]>", line 1, in <module>
  521. S.show(with_picture=False)###line 571:
  522. sage: S.show(with_picture=False)
  523. NameError: name 'S' is not defined
  524. **********************************************************************
  525. File "/sage/devel/sage-main/sage/graphs/graph_database.py", line 589:
  526. sage: (GenericGraphQuery('select degree_sequence from degrees where max_degree=2 and min_degree >= 1',G)).show()
  527. Exception raised:
  528. Traceback (most recent call last):
  529. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  530. self.run_one_example(test, example, filename, compileflags)
  531. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  532. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  533. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  534. compileflags, 1) in test.globs
  535. File "<doctest __main__.example_9[10]>", line 1, in <module>
  536. (GenericGraphQuery('select degree_sequence from degrees where max_degree=2 and min_degree >= 1',G)).show()###line 589:
  537. sage: (GenericGraphQuery('select degree_sequence from degrees where max_degree=2 and min_degree >= 1',G)).show()
  538. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 719, in show
  539. raise RuntimeError('Failure to fetch query.')
  540. RuntimeError: Failure to fetch query.
  541. **********************************************************************
  542. 9 items had failures:
  543. 4 of 7 in __main__.example_10
  544. 2 of 5 in __main__.example_11
  545. 1 of 5 in __main__.example_12
  546. 2 of 6 in __main__.example_15
  547. 2 of 7 in __main__.example_4
  548. 1 of 10 in __main__.example_6
  549. 3 of 6 in __main__.example_7
  550. 5 of 8 in __main__.example_8
  551. 8 of 12 in __main__.example_9
  552. ***Test Failed*** 28 failures.
  553. For whitespace errors, see the file ~/.sage//tmp/.doctest_graph_database.py
  554. [2.6 s]
  555. sage -t -long sage/graphs/matchpoly.pyx
  556. [36.9 s]
  557. sage -t -long sage/graphs/graph_list.py
  558. **********************************************************************
  559. File "/sage/devel/sage-main/sage/graphs/graph_list.py", line 390:
  560. sage: gq = GraphQuery(display_cols=['graph6'],num_vertices=5)
  561. Exception raised:
  562. Traceback (most recent call last):
  563. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  564. self.run_one_example(test, example, filename, compileflags)
  565. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  566. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  567. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  568. compileflags, 1) in test.globs
  569. File "<doctest __main__.example_7[19]>", line 1, in <module>
  570. gq = GraphQuery(display_cols=['graph6'],num_vertices=Integer(5))###line 390:
  571. sage: gq = GraphQuery(display_cols=['graph6'],num_vertices=5)
  572. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  573. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  574. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  575. raise ValueError("Database has no table %s."%query_dict['table_name'])
  576. ValueError: Database has no table graph_data.
  577. **********************************************************************
  578. File "/sage/devel/sage-main/sage/graphs/graph_list.py", line 391:
  579. sage: g = gq.get_graphs_list()
  580. Exception raised:
  581. Traceback (most recent call last):
  582. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  583. self.run_one_example(test, example, filename, compileflags)
  584. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  585. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  586. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  587. compileflags, 1) in test.globs
  588. File "<doctest __main__.example_7[20]>", line 1, in <module>
  589. g = gq.get_graphs_list()###line 391:
  590. sage: g = gq.get_graphs_list()
  591. NameError: name 'gq' is not defined
  592. **********************************************************************
  593. File "/sage/devel/sage-main/sage/graphs/graph_list.py", line 392:
  594. sage: len(g)
  595. Exception raised:
  596. Traceback (most recent call last):
  597. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  598. self.run_one_example(test, example, filename, compileflags)
  599. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  600. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  601. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  602. compileflags, 1) in test.globs
  603. File "<doctest __main__.example_7[21]>", line 1, in <module>
  604. len(g)###line 392:
  605. sage: len(g)
  606. NameError: name 'g' is not defined
  607. **********************************************************************
  608. File "/sage/devel/sage-main/sage/graphs/graph_list.py", line 394:
  609. sage: graphs_list.show_graphs(g)
  610. Exception raised:
  611. Traceback (most recent call last):
  612. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  613. self.run_one_example(test, example, filename, compileflags)
  614. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  615. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  616. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  617. compileflags, 1) in test.globs
  618. File "<doctest __main__.example_7[22]>", line 1, in <module>
  619. graphs_list.show_graphs(g)###line 394:
  620. sage: graphs_list.show_graphs(g)
  621. NameError: name 'g' is not defined
  622. **********************************************************************
  623. 1 items had failures:
  624. 4 of 27 in __main__.example_7
  625. ***Test Failed*** 4 failures.
  626. For whitespace errors, see the file ~/.sage//tmp/.doctest_graph_list.py
  627. [12.0 s]
  628. sage -t -long sage/graphs/graph.py
  629. **********************************************************************
  630. File "/sage/devel/sage-main/sage/graphs/graph.py", line 248:
  631. sage: G = GraphQuery(display_cols=['graph6'], num_vertices=7, diameter=5)
  632. Exception raised:
  633. Traceback (most recent call last):
  634. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  635. self.run_one_example(test, example, filename, compileflags)
  636. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  637. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  638. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  639. compileflags, 1) in test.globs
  640. File "<doctest __main__.example_0[34]>", line 1, in <module>
  641. G = GraphQuery(display_cols=['graph6'], num_vertices=Integer(7), diameter=Integer(5))###line 248:
  642. sage: G = GraphQuery(display_cols=['graph6'], num_vertices=7, diameter=5)
  643. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  644. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  645. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  646. raise ValueError("Database has no table %s."%query_dict['table_name'])
  647. ValueError: Database has no table misc.
  648. **********************************************************************
  649. File "/sage/devel/sage-main/sage/graphs/graph.py", line 249:
  650. sage: L = G.get_graphs_list()
  651. Exception raised:
  652. Traceback (most recent call last):
  653. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  654. self.run_one_example(test, example, filename, compileflags)
  655. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  656. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  657. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  658. compileflags, 1) in test.globs
  659. File "<doctest __main__.example_0[35]>", line 1, in <module>
  660. L = G.get_graphs_list()###line 249:
  661. sage: L = G.get_graphs_list()
  662. AttributeError: 'Graph' object has no attribute 'get_graphs_list'
  663. **********************************************************************
  664. File "/sage/devel/sage-main/sage/graphs/graph.py", line 250:
  665. sage: graphs_list.show_graphs(L)
  666. Exception raised:
  667. Traceback (most recent call last):
  668. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  669. self.run_one_example(test, example, filename, compileflags)
  670. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  671. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  672. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  673. compileflags, 1) in test.globs
  674. File "<doctest __main__.example_0[36]>", line 1, in <module>
  675. graphs_list.show_graphs(L)###line 250:
  676. sage: graphs_list.show_graphs(L)
  677. NameError: name 'L' is not defined
  678. **********************************************************************
  679. File "/sage/devel/sage-main/sage/graphs/graph.py", line 311:
  680. sage: Q = GraphQuery(display_cols=['graph6'],num_vertices=7, diameter=5)
  681. Exception raised:
  682. Traceback (most recent call last):
  683. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  684. self.run_one_example(test, example, filename, compileflags)
  685. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  686. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  687. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  688. compileflags, 1) in test.globs
  689. File "<doctest __main__.example_0[46]>", line 1, in <module>
  690. Q = GraphQuery(display_cols=['graph6'],num_vertices=Integer(7), diameter=Integer(5))###line 311:
  691. sage: Q = GraphQuery(display_cols=['graph6'],num_vertices=7, diameter=5)
  692. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  693. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  694. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  695. raise ValueError("Database has no table %s."%query_dict['table_name'])
  696. ValueError: Database has no table misc.
  697. **********************************************************************
  698. File "/sage/devel/sage-main/sage/graphs/graph.py", line 312:
  699. sage: Q.show()
  700. Exception raised:
  701. Traceback (most recent call last):
  702. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  703. self.run_one_example(test, example, filename, compileflags)
  704. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  705. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  706. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  707. compileflags, 1) in test.globs
  708. File "<doctest __main__.example_0[47]>", line 1, in <module>
  709. Q.show()###line 312:
  710. sage: Q.show()
  711. NameError: name 'Q' is not defined
  712. **********************************************************************
  713. File "/sage/devel/sage-main/sage/graphs/graph.py", line 329:
  714. sage: for g in Q:
  715. show(g)
  716. Exception raised:
  717. Traceback (most recent call last):
  718. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  719. self.run_one_example(test, example, filename, compileflags)
  720. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  721. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  722. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  723. compileflags, 1) in test.globs
  724. File "<doctest __main__.example_0[48]>", line 1, in <module>
  725. for g in Q:###line 329:
  726. sage: for g in Q:
  727. NameError: name 'Q' is not defined
  728. **********************************************************************
  729. 1 items had failures:
  730. 6 of 56 in __main__.example_0
  731. ***Test Failed*** 6 failures.
  732. For whitespace errors, see the file ~/.sage//tmp/.doctest_graph.py
  733. [28.0 s]
  734. sage -t -long sage/graphs/graph_generators.py
  735. [106.6 s]
  736. sage -t -long sage/graphs/generic_graph.py
  737. **********************************************************************
  738. File "/sage/devel/sage-main/sage/graphs/generic_graph.py", line 14700:
  739. sage: graphs_query = GraphQuery(display_cols=['graph6'],num_vertices=4)
  740. Exception raised:
  741. Traceback (most recent call last):
  742. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  743. self.run_one_example(test, example, filename, compileflags)
  744. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  745. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  746. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  747. compileflags, 1) in test.globs
  748. File "<doctest __main__.example_212[2]>", line 1, in <module>
  749. graphs_query = GraphQuery(display_cols=['graph6'],num_vertices=Integer(4))###line 14700:
  750. sage: graphs_query = GraphQuery(display_cols=['graph6'],num_vertices=4)
  751. File "/sage/local/lib/python/site-packages/sage/graphs/graph_database.py", line 429, in __init__
  752. self.intersect(SQLQuery(graph_db, qdict), 'graph_data', join_dict,in_place=True)
  753. File "/sage/local/lib/python/site-packages/sage/databases/database.py", line 959, in __init__
  754. raise ValueError("Database has no table %s."%query_dict['table_name'])
  755. ValueError: Database has no table graph_data.
  756. **********************************************************************
  757. File "/sage/devel/sage-main/sage/graphs/generic_graph.py", line 14701:
  758. sage: L = graphs_query.get_graphs_list()
  759. Exception raised:
  760. Traceback (most recent call last):
  761. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  762. self.run_one_example(test, example, filename, compileflags)
  763. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  764. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  765. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  766. compileflags, 1) in test.globs
  767. File "<doctest __main__.example_212[3]>", line 1, in <module>
  768. L = graphs_query.get_graphs_list()###line 14701:
  769. sage: L = graphs_query.get_graphs_list()
  770. NameError: name 'graphs_query' is not defined
  771. **********************************************************************
  772. File "/sage/devel/sage-main/sage/graphs/generic_graph.py", line 14702:
  773. sage: graphs_list.show_graphs(L)
  774. Exception raised:
  775. Traceback (most recent call last):
  776. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  777. self.run_one_example(test, example, filename, compileflags)
  778. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  779. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  780. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  781. compileflags, 1) in test.globs
  782. File "<doctest __main__.example_212[4]>", line 1, in <module>
  783. graphs_list.show_graphs(L)###line 14702:
  784. sage: graphs_list.show_graphs(L)
  785. NameError: name 'L' is not defined
  786. **********************************************************************
  787. File "/sage/devel/sage-main/sage/graphs/generic_graph.py", line 14703:
  788. sage: for g in L:
  789. G = g.automorphism_group()
  790. G.order(), G.gens()
  791. Exception raised:
  792. Traceback (most recent call last):
  793. File "/sage/local/bin/ncadoctest.py", line 1231, in run_one_test
  794. self.run_one_example(test, example, filename, compileflags)
  795. File "/sage/local/bin/sagedoctest.py", line 38, in run_one_example
  796. OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
  797. File "/sage/local/bin/ncadoctest.py", line 1172, in run_one_example
  798. compileflags, 1) in test.globs
  799. File "<doctest __main__.example_212[5]>", line 1, in <module>
  800. for g in L:###line 14703:
  801. sage: for g in L:
  802. NameError: name 'L' is not defined
  803. **********************************************************************
  804. 1 items had failures:
  805. 4 of 45 in __main__.example_212
  806. ***Test Failed*** 4 failures.
  807. For whitespace errors, see the file ~/.sage//tmp/.doctest_generic_graph.py
  808. [94.4 s]
  809.  
  810. ----------------------------------------------------------------------
  811.  
  812. The following tests failed:
  813.  
  814. sage -t -long devel/sage-main/sage/graphs/graph_database.py # 28 doctests failed
  815. sage -t -long devel/sage-main/sage/graphs/graph_list.py # 4 doctests failed
  816. sage -t -long devel/sage-main/sage/graphs/graph.py # 6 doctests failed
  817. sage -t -long devel/sage-main/sage/graphs/generic_graph.py # 4 doctests failed
  818. ----------------------------------------------------------------------
  819. Timings have been updated.
  820. Total time for all tests: 125.1 seconds
  821. sage-main$
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