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  1. DEBUG: Executing shell function do_compile
  2. Running from numpy source directory.
  3. non-existing path in 'numpy/distutils': 'site.cfg'
  4. F2PY Version 2
  5. blas_opt_info:
  6. blas_mkl_info:
  7. libraries mkl,vml,guide not found in ['/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib', '/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
  8. NOT AVAILABLE
  9.  
  10. atlas_blas_threads_info:
  11. Setting PTATLAS=ATLAS
  12. libraries ptf77blas,ptcblas,atlas not found in ['/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib', '/usr/local/lib64', '/usr/local/lib', '/usr/lib64/atlas', '/usr/lib64/sse2', '/usr/lib64', '/usr/lib']
  13. NOT AVAILABLE
  14.  
  15. atlas_blas_info:
  16. libraries f77blas,cblas,atlas not found in ['/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib', '/usr/local/lib64', '/usr/local/lib', '/usr/lib64/atlas', '/usr/lib64/sse2', '/usr/lib64', '/usr/lib']
  17. NOT AVAILABLE
  18.  
  19. /home/vidal/POKY/build062913_dylan/poky/build/tmp/work/armv7a-vfp-neon-poky-linux-gnueabi/python-numpy/1.7.0-r0/numpy-1.7.0/numpy/distutils/system_info.py:1494: UserWarning:
  20. Atlas (http://math-atlas.sourceforge.net/) libraries not found.
  21. Directories to search for the libraries can be specified in the
  22. numpy/distutils/site.cfg file (section [atlas]) or by setting
  23. the ATLAS environment variable.
  24. warnings.warn(AtlasNotFoundError.__doc__)
  25. blas_info:
  26. FOUND:
  27. libraries = ['blas']
  28. library_dirs = ['/usr/lib64']
  29. language = f77
  30.  
  31. FOUND:
  32. libraries = ['blas']
  33. library_dirs = ['/usr/lib64']
  34. define_macros = [('NO_ATLAS_INFO', 1)]
  35. language = f77
  36.  
  37. lapack_opt_info:
  38. lapack_mkl_info:
  39. mkl_info:
  40. libraries mkl,vml,guide not found in ['/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib', '/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
  41. NOT AVAILABLE
  42.  
  43. NOT AVAILABLE
  44.  
  45. atlas_threads_info:
  46. Setting PTATLAS=ATLAS
  47. libraries ptf77blas,ptcblas,atlas not found in /home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib
  48. libraries lapack_atlas not found in /home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib
  49. libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib64
  50. libraries lapack_atlas not found in /usr/local/lib64
  51. libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
  52. libraries lapack_atlas not found in /usr/local/lib
  53. libraries ptf77blas,ptcblas,atlas not found in /usr/lib64/atlas
  54. libraries lapack_atlas not found in /usr/lib64/atlas
  55. libraries ptf77blas,ptcblas,atlas not found in /usr/lib64/sse2
  56. libraries lapack_atlas not found in /usr/lib64/sse2
  57. libraries ptf77blas,ptcblas,atlas not found in /usr/lib64
  58. libraries lapack_atlas not found in /usr/lib64
  59. libraries ptf77blas,ptcblas,atlas not found in /usr/lib
  60. libraries lapack_atlas not found in /usr/lib
  61. numpy.distutils.system_info.atlas_threads_info
  62. NOT AVAILABLE
  63.  
  64. atlas_info:
  65. libraries f77blas,cblas,atlas not found in /home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib
  66. libraries lapack_atlas not found in /home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib
  67. libraries f77blas,cblas,atlas not found in /usr/local/lib64
  68. libraries lapack_atlas not found in /usr/local/lib64
  69. libraries f77blas,cblas,atlas not found in /usr/local/lib
  70. libraries lapack_atlas not found in /usr/local/lib
  71. libraries f77blas,cblas,atlas not found in /usr/lib64/atlas
  72. libraries lapack_atlas not found in /usr/lib64/atlas
  73. libraries f77blas,cblas,atlas not found in /usr/lib64/sse2
  74. libraries lapack_atlas not found in /usr/lib64/sse2
  75. libraries f77blas,cblas,atlas not found in /usr/lib64
  76. libraries lapack_atlas not found in /usr/lib64
  77. libraries f77blas,cblas,atlas not found in /usr/lib
  78. libraries lapack_atlas not found in /usr/lib
  79. numpy.distutils.system_info.atlas_info
  80. NOT AVAILABLE
  81.  
  82. /home/vidal/POKY/build062913_dylan/poky/build/tmp/work/armv7a-vfp-neon-poky-linux-gnueabi/python-numpy/1.7.0-r0/numpy-1.7.0/numpy/distutils/system_info.py:1408: UserWarning:
  83. Atlas (http://math-atlas.sourceforge.net/) libraries not found.
  84. Directories to search for the libraries can be specified in the
  85. numpy/distutils/site.cfg file (section [atlas]) or by setting
  86. the ATLAS environment variable.
  87. warnings.warn(AtlasNotFoundError.__doc__)
  88. lapack_info:
  89. FOUND:
  90. libraries = ['lapack']
  91. library_dirs = ['/usr/lib64']
  92. language = f77
  93.  
  94. FOUND:
  95. libraries = ['lapack', 'blas']
  96. library_dirs = ['/usr/lib64']
  97. define_macros = [('NO_ATLAS_INFO', 1)]
  98. language = f77
  99.  
  100. running build
  101. running config_cc
  102. unifing config_cc, config, build_clib, build_ext, build commands --compiler options
  103. running config_fc
  104. unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
  105. running build_src
  106. build_src
  107. building py_modules sources
  108. building library "npymath" sources
  109. customize Gnu95FCompiler
  110. Found executable /usr/bin/gfortran
  111. Could not locate executable arm-poky-linux-gnueabi-g77 -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard
  112. Could not locate executable arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard -shared
  113. Could not locate executable arm-poky-linux-gnueabi-ld --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard
  114. Found executable /home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/bin/armv7a-vfp-neon-poky-linux-gnueabi/arm-poky-linux-gnueabi-ar
  115. Found executable /home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/bin/armv7a-vfp-neon-poky-linux-gnueabi/arm-poky-linux-gnueabi-ranlib
  116. customize Gnu95FCompiler
  117. customize Gnu95FCompiler using config
  118. C compiler: arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -O2 -pipe -g -feliminate-unused-debug-types -fPIC
  119.  
  120. compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include -I/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/include/python2.7 -c'
  121. arm-poky-linux-gnueabi-gcc: _configtest.c
  122. arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard _configtest.o -o _configtest
  123. success!
  124. removing: _configtest.c _configtest.o _configtest
  125. C compiler: arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -O2 -pipe -g -feliminate-unused-debug-types -fPIC
  126.  
  127. compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include -I/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/include/python2.7 -c'
  128. arm-poky-linux-gnueabi-gcc: _configtest.c
  129. _configtest.c:1:5: warning: conflicting types for built-in function 'exp' [enabled by default]
  130. arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard _configtest.o -o _configtest
  131. _configtest.o: In function `main':
  132. /home/vidal/POKY/build062913_dylan/poky/build/tmp/work/armv7a-vfp-neon-poky-linux-gnueabi/python-numpy/1.7.0-r0/numpy-1.7.0/_configtest.c:6: undefined reference to `exp'
  133. collect2: error: ld returned 1 exit status
  134. _configtest.o: In function `main':
  135. /home/vidal/POKY/build062913_dylan/poky/build/tmp/work/armv7a-vfp-neon-poky-linux-gnueabi/python-numpy/1.7.0-r0/numpy-1.7.0/_configtest.c:6: undefined reference to `exp'
  136. collect2: error: ld returned 1 exit status
  137. failure.
  138. removing: _configtest.c _configtest.o
  139. C compiler: arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -O2 -pipe -g -feliminate-unused-debug-types -fPIC
  140.  
  141. compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include -I/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/include/python2.7 -c'
  142. arm-poky-linux-gnueabi-gcc: _configtest.c
  143. _configtest.c:1:5: warning: conflicting types for built-in function 'exp' [enabled by default]
  144. arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard _configtest.o -lm -o _configtest
  145. success!
  146. removing: _configtest.c _configtest.o _configtest
  147. building library "npysort" sources
  148. building extension "numpy.core._dummy" sources
  149. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h' to sources.
  150. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h' to sources.
  151. executing numpy/core/code_generators/generate_numpy_api.py
  152. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.h' to sources.
  153. numpy.core - nothing done with h_files = ['build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.h']
  154. building extension "numpy.core.multiarray" sources
  155. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h' to sources.
  156. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h' to sources.
  157. executing numpy/core/code_generators/generate_numpy_api.py
  158. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.h' to sources.
  159. numpy.core - nothing done with h_files = ['build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.h']
  160. building extension "numpy.core.umath" sources
  161. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h' to sources.
  162. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h' to sources.
  163. executing numpy/core/code_generators/generate_ufunc_api.py
  164. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__ufunc_api.h' to sources.
  165. adding 'build/src.linux-x86_64-2.7/numpy/core/src/umath' to include_dirs.
  166. numpy.core - nothing done with h_files = ['build/src.linux-x86_64-2.7/numpy/core/src/umath/funcs.inc', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__ufunc_api.h']
  167. building extension "numpy.core.scalarmath" sources
  168. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h' to sources.
  169. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h' to sources.
  170. executing numpy/core/code_generators/generate_numpy_api.py
  171. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.h' to sources.
  172. executing numpy/core/code_generators/generate_ufunc_api.py
  173. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__ufunc_api.h' to sources.
  174. numpy.core - nothing done with h_files = ['build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__ufunc_api.h']
  175. building extension "numpy.core._dotblas" sources
  176. building extension "numpy.core.umath_tests" sources
  177. building extension "numpy.core.multiarray_tests" sources
  178. building extension "numpy.lib._compiled_base" sources
  179. building extension "numpy.numarray._capi" sources
  180. building extension "numpy.fft.fftpack_lite" sources
  181. building extension "numpy.linalg.lapack_lite" sources
  182. adding 'numpy/linalg/lapack_litemodule.c' to sources.
  183. adding 'numpy/linalg/python_xerbla.c' to sources.
  184. building extension "numpy.random.mtrand" sources
  185. C compiler: arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -O2 -pipe -g -feliminate-unused-debug-types -fPIC
  186.  
  187. compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include -I/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/include/python2.7 -c'
  188. arm-poky-linux-gnueabi-gcc: _configtest.c
  189. arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard _configtest.o -o _configtest
  190. _configtest
  191. unable to execute _configtest: Exec format error
  192. failure.
  193. removing: _configtest.c _configtest.o _configtest
  194. building data_files sources
  195. build_src: building npy-pkg config files
  196. running build_py
  197. copying numpy/version.py -> build/lib.linux-x86_64-2.7/numpy
  198. copying build/src.linux-x86_64-2.7/numpy/__config__.py -> build/lib.linux-x86_64-2.7/numpy
  199. copying build/src.linux-x86_64-2.7/numpy/distutils/__config__.py -> build/lib.linux-x86_64-2.7/numpy/distutils
  200. running build_clib
  201. customize UnixCCompiler
  202. customize UnixCCompiler using build_clib
  203. running build_ext
  204. customize UnixCCompiler
  205. customize UnixCCompiler using build_ext
  206. customize Gnu95FCompiler
  207. customize Gnu95FCompiler
  208. customize Gnu95FCompiler using build_ext
  209. building 'numpy.linalg.lapack_lite' extension
  210. compiling C sources
  211. C compiler: arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -O2 -pipe -g -feliminate-unused-debug-types -fPIC
  212.  
  213. compile options: '-DNO_ATLAS_INFO=1 -Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include -I/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/multiarray -Ibuild/src.linux-x86_64-2.7/numpy/core/src/umath -c'
  214. arm-poky-linux-gnueabi-gcc: numpy/linalg/lapack_litemodule.c
  215. arm-poky-linux-gnueabi-gcc: numpy/linalg/python_xerbla.c
  216. /usr/bin/gfortran -Wall -Wl,-O1 -Wl,--hash-style=gnu -Wl,--as-needed build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o build/temp.linux-x86_64-2.7/numpy/linalg/python_xerbla.o -L/usr/lib64 -L/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/lib -Lbuild/temp.linux-x86_64-2.7 -llapack -lblas -lpython2.7 -lgfortran -o build/lib.linux-x86_64-2.7/numpy/linalg/lapack_lite.so
  217. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  218. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  219. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  220. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  221. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  222. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  223. build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: could not read symbols: File in wrong format
  224. collect2: ld returned 1 exit status
  225. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  226. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  227. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  228. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  229. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  230. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  231. build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: could not read symbols: File in wrong format
  232. collect2: ld returned 1 exit status
  233. error: Command "/usr/bin/gfortran -Wall -Wl,-O1 -Wl,--hash-style=gnu -Wl,--as-needed build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o build/temp.linux-x86_64-2.7/numpy/linalg/python_xerbla.o -L/usr/lib64 -L/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/lib -Lbuild/temp.linux-x86_64-2.7 -llapack -lblas -lpython2.7 -lgfortran -o build/lib.linux-x86_64-2.7/numpy/linalg/lapack_lite.so" failed with exit status 1
  234. Running from numpy source directory.
  235. non-existing path in 'numpy/distutils': 'site.cfg'
  236. F2PY Version 2
  237. blas_opt_info:
  238. blas_mkl_info:
  239. libraries mkl,vml,guide not found in ['/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib', '/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
  240. NOT AVAILABLE
  241.  
  242. atlas_blas_threads_info:
  243. Setting PTATLAS=ATLAS
  244. libraries ptf77blas,ptcblas,atlas not found in ['/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib', '/usr/local/lib64', '/usr/local/lib', '/usr/lib64/atlas', '/usr/lib64/sse2', '/usr/lib64', '/usr/lib']
  245. NOT AVAILABLE
  246.  
  247. atlas_blas_info:
  248. libraries f77blas,cblas,atlas not found in ['/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib', '/usr/local/lib64', '/usr/local/lib', '/usr/lib64/atlas', '/usr/lib64/sse2', '/usr/lib64', '/usr/lib']
  249. NOT AVAILABLE
  250.  
  251. /home/vidal/POKY/build062913_dylan/poky/build/tmp/work/armv7a-vfp-neon-poky-linux-gnueabi/python-numpy/1.7.0-r0/numpy-1.7.0/numpy/distutils/system_info.py:1494: UserWarning:
  252. Atlas (http://math-atlas.sourceforge.net/) libraries not found.
  253. Directories to search for the libraries can be specified in the
  254. numpy/distutils/site.cfg file (section [atlas]) or by setting
  255. the ATLAS environment variable.
  256. warnings.warn(AtlasNotFoundError.__doc__)
  257. blas_info:
  258. FOUND:
  259. libraries = ['blas']
  260. library_dirs = ['/usr/lib64']
  261. language = f77
  262.  
  263. FOUND:
  264. libraries = ['blas']
  265. library_dirs = ['/usr/lib64']
  266. define_macros = [('NO_ATLAS_INFO', 1)]
  267. language = f77
  268.  
  269. lapack_opt_info:
  270. lapack_mkl_info:
  271. mkl_info:
  272. libraries mkl,vml,guide not found in ['/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib', '/usr/local/lib64', '/usr/local/lib', '/usr/lib64', '/usr/lib']
  273. NOT AVAILABLE
  274.  
  275. NOT AVAILABLE
  276.  
  277. atlas_threads_info:
  278. Setting PTATLAS=ATLAS
  279. libraries ptf77blas,ptcblas,atlas not found in /home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib
  280. libraries lapack_atlas not found in /home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib
  281. libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib64
  282. libraries lapack_atlas not found in /usr/local/lib64
  283. libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
  284. libraries lapack_atlas not found in /usr/local/lib
  285. libraries ptf77blas,ptcblas,atlas not found in /usr/lib64/atlas
  286. libraries lapack_atlas not found in /usr/lib64/atlas
  287. libraries ptf77blas,ptcblas,atlas not found in /usr/lib64/sse2
  288. libraries lapack_atlas not found in /usr/lib64/sse2
  289. libraries ptf77blas,ptcblas,atlas not found in /usr/lib64
  290. libraries lapack_atlas not found in /usr/lib64
  291. libraries ptf77blas,ptcblas,atlas not found in /usr/lib
  292. libraries lapack_atlas not found in /usr/lib
  293. numpy.distutils.system_info.atlas_threads_info
  294. NOT AVAILABLE
  295.  
  296. atlas_info:
  297. libraries f77blas,cblas,atlas not found in /home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib
  298. libraries lapack_atlas not found in /home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/lib
  299. libraries f77blas,cblas,atlas not found in /usr/local/lib64
  300. libraries lapack_atlas not found in /usr/local/lib64
  301. libraries f77blas,cblas,atlas not found in /usr/local/lib
  302. libraries lapack_atlas not found in /usr/local/lib
  303. libraries f77blas,cblas,atlas not found in /usr/lib64/atlas
  304. libraries lapack_atlas not found in /usr/lib64/atlas
  305. libraries f77blas,cblas,atlas not found in /usr/lib64/sse2
  306. libraries lapack_atlas not found in /usr/lib64/sse2
  307. libraries f77blas,cblas,atlas not found in /usr/lib64
  308. libraries lapack_atlas not found in /usr/lib64
  309. libraries f77blas,cblas,atlas not found in /usr/lib
  310. libraries lapack_atlas not found in /usr/lib
  311. numpy.distutils.system_info.atlas_info
  312. NOT AVAILABLE
  313.  
  314. /home/vidal/POKY/build062913_dylan/poky/build/tmp/work/armv7a-vfp-neon-poky-linux-gnueabi/python-numpy/1.7.0-r0/numpy-1.7.0/numpy/distutils/system_info.py:1408: UserWarning:
  315. Atlas (http://math-atlas.sourceforge.net/) libraries not found.
  316. Directories to search for the libraries can be specified in the
  317. numpy/distutils/site.cfg file (section [atlas]) or by setting
  318. the ATLAS environment variable.
  319. warnings.warn(AtlasNotFoundError.__doc__)
  320. lapack_info:
  321. FOUND:
  322. libraries = ['lapack']
  323. library_dirs = ['/usr/lib64']
  324. language = f77
  325.  
  326. FOUND:
  327. libraries = ['lapack', 'blas']
  328. library_dirs = ['/usr/lib64']
  329. define_macros = [('NO_ATLAS_INFO', 1)]
  330. language = f77
  331.  
  332. running build
  333. running config_cc
  334. unifing config_cc, config, build_clib, build_ext, build commands --compiler options
  335. running config_fc
  336. unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
  337. running build_src
  338. build_src
  339. building py_modules sources
  340. building library "npymath" sources
  341. customize Gnu95FCompiler
  342. Found executable /usr/bin/gfortran
  343. Could not locate executable arm-poky-linux-gnueabi-g77 -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard
  344. Could not locate executable arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard -shared
  345. Could not locate executable arm-poky-linux-gnueabi-ld --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard
  346. Found executable /home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/bin/armv7a-vfp-neon-poky-linux-gnueabi/arm-poky-linux-gnueabi-ar
  347. Found executable /home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/x86_64-linux/usr/bin/armv7a-vfp-neon-poky-linux-gnueabi/arm-poky-linux-gnueabi-ranlib
  348. customize Gnu95FCompiler
  349. customize Gnu95FCompiler using config
  350. C compiler: arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -O2 -pipe -g -feliminate-unused-debug-types -fPIC
  351.  
  352. compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include -I/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/include/python2.7 -c'
  353. arm-poky-linux-gnueabi-gcc: _configtest.c
  354. arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard _configtest.o -o _configtest
  355. success!
  356. removing: _configtest.c _configtest.o _configtest
  357. C compiler: arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -O2 -pipe -g -feliminate-unused-debug-types -fPIC
  358.  
  359. compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include -I/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/include/python2.7 -c'
  360. arm-poky-linux-gnueabi-gcc: _configtest.c
  361. _configtest.c:1:5: warning: conflicting types for built-in function 'exp' [enabled by default]
  362. arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard _configtest.o -o _configtest
  363. _configtest.o: In function `main':
  364. /home/vidal/POKY/build062913_dylan/poky/build/tmp/work/armv7a-vfp-neon-poky-linux-gnueabi/python-numpy/1.7.0-r0/numpy-1.7.0/_configtest.c:6: undefined reference to `exp'
  365. collect2: error: ld returned 1 exit status
  366. _configtest.o: In function `main':
  367. /home/vidal/POKY/build062913_dylan/poky/build/tmp/work/armv7a-vfp-neon-poky-linux-gnueabi/python-numpy/1.7.0-r0/numpy-1.7.0/_configtest.c:6: undefined reference to `exp'
  368. collect2: error: ld returned 1 exit status
  369. failure.
  370. removing: _configtest.c _configtest.o
  371. C compiler: arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -O2 -pipe -g -feliminate-unused-debug-types -fPIC
  372.  
  373. compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include -I/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/include/python2.7 -c'
  374. arm-poky-linux-gnueabi-gcc: _configtest.c
  375. _configtest.c:1:5: warning: conflicting types for built-in function 'exp' [enabled by default]
  376. arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard _configtest.o -lm -o _configtest
  377. success!
  378. removing: _configtest.c _configtest.o _configtest
  379. building library "npysort" sources
  380. building extension "numpy.core._dummy" sources
  381. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h' to sources.
  382. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h' to sources.
  383. executing numpy/core/code_generators/generate_numpy_api.py
  384. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.h' to sources.
  385. numpy.core - nothing done with h_files = ['build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.h']
  386. building extension "numpy.core.multiarray" sources
  387. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h' to sources.
  388. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h' to sources.
  389. executing numpy/core/code_generators/generate_numpy_api.py
  390. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.h' to sources.
  391. numpy.core - nothing done with h_files = ['build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.h']
  392. building extension "numpy.core.umath" sources
  393. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h' to sources.
  394. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h' to sources.
  395. executing numpy/core/code_generators/generate_ufunc_api.py
  396. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__ufunc_api.h' to sources.
  397. adding 'build/src.linux-x86_64-2.7/numpy/core/src/umath' to include_dirs.
  398. numpy.core - nothing done with h_files = ['build/src.linux-x86_64-2.7/numpy/core/src/umath/funcs.inc', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__ufunc_api.h']
  399. building extension "numpy.core.scalarmath" sources
  400. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h' to sources.
  401. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h' to sources.
  402. executing numpy/core/code_generators/generate_numpy_api.py
  403. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.h' to sources.
  404. executing numpy/core/code_generators/generate_ufunc_api.py
  405. adding 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__ufunc_api.h' to sources.
  406. numpy.core - nothing done with h_files = ['build/src.linux-x86_64-2.7/numpy/core/include/numpy/config.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/_numpyconfig.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__multiarray_api.h', 'build/src.linux-x86_64-2.7/numpy/core/include/numpy/__ufunc_api.h']
  407. building extension "numpy.core._dotblas" sources
  408. building extension "numpy.core.umath_tests" sources
  409. building extension "numpy.core.multiarray_tests" sources
  410. building extension "numpy.lib._compiled_base" sources
  411. building extension "numpy.numarray._capi" sources
  412. building extension "numpy.fft.fftpack_lite" sources
  413. building extension "numpy.linalg.lapack_lite" sources
  414. adding 'numpy/linalg/lapack_litemodule.c' to sources.
  415. adding 'numpy/linalg/python_xerbla.c' to sources.
  416. building extension "numpy.random.mtrand" sources
  417. C compiler: arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -O2 -pipe -g -feliminate-unused-debug-types -fPIC
  418.  
  419. compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include -I/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/include/python2.7 -c'
  420. arm-poky-linux-gnueabi-gcc: _configtest.c
  421. arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard _configtest.o -o _configtest
  422. _configtest
  423. unable to execute _configtest: Exec format error
  424. failure.
  425. removing: _configtest.c _configtest.o _configtest
  426. building data_files sources
  427. build_src: building npy-pkg config files
  428. running build_py
  429. copying numpy/version.py -> build/lib.linux-x86_64-2.7/numpy
  430. copying build/src.linux-x86_64-2.7/numpy/__config__.py -> build/lib.linux-x86_64-2.7/numpy
  431. copying build/src.linux-x86_64-2.7/numpy/distutils/__config__.py -> build/lib.linux-x86_64-2.7/numpy/distutils
  432. running build_clib
  433. customize UnixCCompiler
  434. customize UnixCCompiler using build_clib
  435. running build_ext
  436. customize UnixCCompiler
  437. customize UnixCCompiler using build_ext
  438. customize Gnu95FCompiler
  439. customize Gnu95FCompiler
  440. customize Gnu95FCompiler using build_ext
  441. building 'numpy.linalg.lapack_lite' extension
  442. compiling C sources
  443. C compiler: arm-poky-linux-gnueabi-gcc -march=armv7-a -mthumb-interwork -mfloat-abi=softfp -mfpu=neon --sysroot=/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -O2 -pipe -g -feliminate-unused-debug-types -fPIC
  444.  
  445. compile options: '-DNO_ATLAS_INFO=1 -Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include -I/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/multiarray -Ibuild/src.linux-x86_64-2.7/numpy/core/src/umath -c'
  446. arm-poky-linux-gnueabi-gcc: numpy/linalg/lapack_litemodule.c
  447. arm-poky-linux-gnueabi-gcc: numpy/linalg/python_xerbla.c
  448. /usr/bin/gfortran -Wall -Wl,-O1 -Wl,--hash-style=gnu -Wl,--as-needed build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o build/temp.linux-x86_64-2.7/numpy/linalg/python_xerbla.o -L/usr/lib64 -L/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/lib -Lbuild/temp.linux-x86_64-2.7 -llapack -lblas -lpython2.7 -lgfortran -o build/lib.linux-x86_64-2.7/numpy/linalg/lapack_lite.so
  449. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  450. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  451. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  452. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  453. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  454. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  455. build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: could not read symbols: File in wrong format
  456. collect2: ld returned 1 exit status
  457. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  458. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  459. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  460. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  461. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  462. /usr/bin/ld: build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: Relocations in generic ELF (EM: 40)
  463. build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o: could not read symbols: File in wrong format
  464. collect2: ld returned 1 exit status
  465. error: Command "/usr/bin/gfortran -Wall -Wl,-O1 -Wl,--hash-style=gnu -Wl,--as-needed build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o build/temp.linux-x86_64-2.7/numpy/linalg/python_xerbla.o -L/usr/lib64 -L/home/vidal/POKY/build062913_dylan/poky/build/tmp/sysroots/beagleboard/usr/lib -Lbuild/temp.linux-x86_64-2.7 -llapack -lblas -lpython2.7 -lgfortran -o build/lib.linux-x86_64-2.7/numpy/linalg/lapack_lite.so" failed with exit status 1
  466. ERROR: python setup.py build_ext execution failed.
  467. ERROR: Function failed: do_compile (see /home/vidal/POKY/build062913_dylan/poky/build/tmp/work/armv7a-vfp-neon-poky-linux-gnueabi/python-numpy/1.7.0-r0/temp/log.do_compile.5878 for further information)
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