bwa.xml

<appConfig xmlns="http://nbcr.sdsc.edu/opal/types"
 xmlns:xsd="http://www.w3.org/2001/XMLSchema">
 <metadata appName="BWA">
  <usage><![CDATA[Prueba bwa.]]></usage>
  <info xsd:type="xsd:string">
    <![CDATA[bwa]]>
  </info>

  <types>
    <!-- list of flags -->
    <flags></flags>

    <!-- list of tagged parameters -->
    <taggedParams></taggedParams>

    <!-- list of untagged parameters, in order -->
    <untaggedParams></untaggedParams>

      <groups></groups>
    </types>

  </metadata>
  <binaryLocation>/opt/web/opal_scripts/bwa/bwa.condor</binaryLocation>
  <defaultArgs></defaultArgs>
  <parallel>false</parallel>
</appConfig>