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  1. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-12 14:24:15,803| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  2. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-12 14:24:15,804| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  3. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-12 14:24:15,804| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  4. WARN - InitializationFilter$InitializationCompletion$1.run(1496) |2012-04-12 15:18:45,206| Error while trying to import test data
  5. java.io.EOFException: Unexpected end of ZLIB input stream
  6. at java.util.zip.InflaterInputStream.fill(InflaterInputStream.java:223)
  7. at java.util.zip.InflaterInputStream.read(InflaterInputStream.java:141)
  8. at java.util.zip.ZipInputStream.read(ZipInputStream.java:154)
  9. at java.io.FilterInputStream.read(FilterInputStream.java:90)
  10. at org.apache.commons.io.IOUtils.copyLarge(IOUtils.java:1025)
  11. at org.apache.commons.io.IOUtils.copy(IOUtils.java:999)
  12. at org.openmrs.web.filter.initialization.InitializationFilter.importTestDataSet(InitializationFilter.java:1026)
  13. at org.openmrs.web.filter.initialization.InitializationFilter.access$400(InitializationFilter.java:84)
  14. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1459)
  15. at java.lang.Thread.run(Thread.java:662)
  16. Apr 12, 2012 3:28:38 PM org.apache.catalina.core.AprLifecycleListener init
  17. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  18. Apr 12, 2012 3:28:38 PM org.apache.coyote.http11.Http11Protocol init
  19. INFO: Initializing Coyote HTTP/1.1 on http-8080
  20. Apr 12, 2012 3:28:38 PM org.apache.catalina.startup.Catalina load
  21. INFO: Initialization processed in 387 ms
  22. Apr 12, 2012 3:28:38 PM org.apache.catalina.core.StandardService start
  23. INFO: Starting service Catalina
  24. Apr 12, 2012 3:28:38 PM org.apache.catalina.core.StandardEngine start
  25. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  26. Apr 12, 2012 3:28:38 PM org.apache.catalina.startup.HostConfig deployDescriptor
  27. INFO: Deploying configuration descriptor openmrs.xml
  28. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-12 15:28:39,479| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  29. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-12 15:28:39,488| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  30. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-12 15:28:39,489| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  31. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-12 15:28:39,595| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  32. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-12 15:28:39,596| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  33. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-12 15:28:39,596| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  34. Apr 12, 2012 3:28:39 PM org.apache.catalina.startup.HostConfig deployDescriptor
  35. INFO: Deploying configuration descriptor ROOT.xml
  36. Apr 12, 2012 3:28:39 PM org.apache.catalina.startup.HostConfig deployDescriptor
  37. INFO: Deploying configuration descriptor manager.xml
  38. Apr 12, 2012 3:28:39 PM org.apache.catalina.startup.HostConfig deployDescriptor
  39. INFO: Deploying configuration descriptor host-manager.xml
  40. Apr 12, 2012 3:28:39 PM org.apache.coyote.http11.Http11Protocol start
  41. INFO: Starting Coyote HTTP/1.1 on http-8080
  42. Apr 12, 2012 3:28:39 PM org.apache.catalina.startup.Catalina start
  43. INFO: Server startup in 1512 ms
  44. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-12 15:30:51,606| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  45. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-12 15:30:51,606| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  46. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-12 15:31:01,224| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  47. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-12 15:31:01,225| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  48. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-12 15:31:01,225| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  49. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-12 15:31:37,335| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  50. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-12 15:31:37,336| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  51. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-12 15:31:37,336| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  52. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-12 15:36:38,475| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  53. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-12 15:36:38,476| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  54. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-12 15:36:38,477| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  55. WARN - InitializationFilter$InitializationCompletion$1.run(1496) |2012-04-12 16:26:29,374| Error while trying to import test data
  56. java.io.EOFException: Unexpected end of ZLIB input stream
  57. at java.util.zip.InflaterInputStream.fill(InflaterInputStream.java:223)
  58. at java.util.zip.InflaterInputStream.read(InflaterInputStream.java:141)
  59. at java.util.zip.ZipInputStream.read(ZipInputStream.java:154)
  60. at java.io.FilterInputStream.read(FilterInputStream.java:90)
  61. at org.apache.commons.io.IOUtils.copyLarge(IOUtils.java:1025)
  62. at org.apache.commons.io.IOUtils.copy(IOUtils.java:999)
  63. at org.openmrs.web.filter.initialization.InitializationFilter.importTestDataSet(InitializationFilter.java:1026)
  64. at org.openmrs.web.filter.initialization.InitializationFilter.access$400(InitializationFilter.java:84)
  65. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1459)
  66. at java.lang.Thread.run(Thread.java:662)
  67. Apr 13, 2012 8:26:58 AM org.apache.catalina.core.AprLifecycleListener init
  68. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  69. Apr 13, 2012 8:26:58 AM org.apache.coyote.http11.Http11Protocol init
  70. INFO: Initializing Coyote HTTP/1.1 on http-8080
  71. Apr 13, 2012 8:26:58 AM org.apache.catalina.startup.Catalina load
  72. INFO: Initialization processed in 389 ms
  73. Apr 13, 2012 8:26:58 AM org.apache.catalina.core.StandardService start
  74. INFO: Starting service Catalina
  75. Apr 13, 2012 8:26:58 AM org.apache.catalina.core.StandardEngine start
  76. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  77. Apr 13, 2012 8:26:58 AM org.apache.catalina.startup.HostConfig deployDescriptor
  78. INFO: Deploying configuration descriptor openmrs.xml
  79. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 08:26:59,680| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  80. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 08:26:59,689| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  81. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 08:26:59,689| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  82. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 08:26:59,795| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  83. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 08:26:59,796| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  84. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 08:26:59,796| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  85. Apr 13, 2012 8:26:59 AM org.apache.catalina.startup.HostConfig deployDescriptor
  86. INFO: Deploying configuration descriptor ROOT.xml
  87. Apr 13, 2012 8:26:59 AM org.apache.catalina.startup.HostConfig deployDescriptor
  88. INFO: Deploying configuration descriptor manager.xml
  89. Apr 13, 2012 8:26:59 AM org.apache.catalina.startup.HostConfig deployDescriptor
  90. INFO: Deploying configuration descriptor host-manager.xml
  91. Apr 13, 2012 8:26:59 AM org.apache.coyote.http11.Http11Protocol start
  92. INFO: Starting Coyote HTTP/1.1 on http-8080
  93. Apr 13, 2012 8:26:59 AM org.apache.catalina.startup.Catalina start
  94. INFO: Server startup in 1516 ms
  95. Apr 13, 2012 8:39:01 AM org.apache.catalina.loader.WebappClassLoader clearReferencesJdbc
  96. SEVERE: A web application registered the JBDC driver [com.mysql.jdbc.Driver] but failed to unregister it when the web application was stopped. To prevent a memory leak, the JDBC Driver has been forcibly unregistered.
  97. Apr 13, 2012 8:39:01 AM org.apache.catalina.loader.WebappClassLoader clearReferencesJdbc
  98. SEVERE: A web application registered the JBDC driver [org.postgresql.Driver] but failed to unregister it when the web application was stopped. To prevent a memory leak, the JDBC Driver has been forcibly unregistered.
  99. Apr 13, 2012 8:39:02 AM org.apache.catalina.startup.HostConfig checkResources
  100. INFO: Undeploying context [/openmrs]
  101. Apr 13, 2012 8:41:10 AM org.apache.catalina.startup.HostConfig deployWAR
  102. INFO: Deploying web application archive openmrs.war
  103. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 08:41:12,092| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  104. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 08:41:12,099| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  105. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 08:41:12,100| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  106. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 08:41:12,191| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  107. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 08:41:12,192| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  108. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 08:41:12,192| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  109. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 08:41:28,570| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  110. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 08:41:28,571| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  111. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 08:41:57,992| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  112. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 08:41:57,993| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  113. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 08:41:57,994| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  114. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 08:42:37,251| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  115. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 08:42:37,251| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  116. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 08:42:37,252| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  117. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 08:46:16,854| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  118. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 08:46:16,855| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  119. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 08:46:16,855| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  120. WARN - InitializationFilter$InitializationCompletion$1.run(1496) |2012-04-13 10:49:44,458| Error while trying to import test data
  121. java.io.EOFException: Unexpected end of ZLIB input stream
  122. at java.util.zip.InflaterInputStream.fill(InflaterInputStream.java:223)
  123. at java.util.zip.InflaterInputStream.read(InflaterInputStream.java:141)
  124. at java.util.zip.ZipInputStream.read(ZipInputStream.java:154)
  125. at java.io.FilterInputStream.read(FilterInputStream.java:90)
  126. at org.apache.commons.io.IOUtils.copyLarge(IOUtils.java:1025)
  127. at org.apache.commons.io.IOUtils.copy(IOUtils.java:999)
  128. at org.openmrs.web.filter.initialization.InitializationFilter.importTestDataSet(InitializationFilter.java:1026)
  129. at org.openmrs.web.filter.initialization.InitializationFilter.access$400(InitializationFilter.java:84)
  130. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1459)
  131. at java.lang.Thread.run(Thread.java:662)
  132. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 10:58:06,221| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  133. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 10:58:06,222| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  134. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 10:58:13,083| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  135. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 10:58:13,083| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  136. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 10:58:13,084| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  137. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 12:51:22,310| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  138. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 12:51:22,311| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  139. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 12:51:30,162| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  140. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 12:51:30,162| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  141. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 12:51:30,163| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  142. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 12:51:46,376| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  143. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 12:51:46,376| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  144. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 12:51:46,377| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  145. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 12:55:14,130| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  146. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 12:55:14,130| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  147. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 12:55:14,131| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  148. Apr 13, 2012 2:47:26 PM org.apache.catalina.core.AprLifecycleListener init
  149. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  150. Apr 13, 2012 2:47:26 PM org.apache.coyote.http11.Http11Protocol init
  151. INFO: Initializing Coyote HTTP/1.1 on http-8080
  152. Apr 13, 2012 2:47:26 PM org.apache.catalina.startup.Catalina load
  153. INFO: Initialization processed in 396 ms
  154. Apr 13, 2012 2:47:26 PM org.apache.catalina.core.StandardService start
  155. INFO: Starting service Catalina
  156. Apr 13, 2012 2:47:26 PM org.apache.catalina.core.StandardEngine start
  157. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  158. Apr 13, 2012 2:47:26 PM org.apache.catalina.startup.HostConfig deployDescriptor
  159. INFO: Deploying configuration descriptor openmrs.xml
  160. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 14:47:27,757| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  161. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 14:47:27,766| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  162. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 14:47:27,767| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  163. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 14:47:27,873| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  164. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 14:47:27,874| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  165. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 14:47:27,874| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  166. Apr 13, 2012 2:47:27 PM org.apache.catalina.startup.HostConfig deployDescriptor
  167. INFO: Deploying configuration descriptor ROOT.xml
  168. Apr 13, 2012 2:47:27 PM org.apache.catalina.startup.HostConfig deployDescriptor
  169. INFO: Deploying configuration descriptor manager.xml
  170. Apr 13, 2012 2:47:28 PM org.apache.catalina.startup.HostConfig deployDescriptor
  171. INFO: Deploying configuration descriptor host-manager.xml
  172. Apr 13, 2012 2:47:28 PM org.apache.coyote.http11.Http11Protocol start
  173. INFO: Starting Coyote HTTP/1.1 on http-8080
  174. Apr 13, 2012 2:47:28 PM org.apache.catalina.startup.Catalina start
  175. INFO: Server startup in 1626 ms
  176. Apr 13, 2012 2:51:19 PM org.apache.catalina.core.AprLifecycleListener init
  177. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  178. Apr 13, 2012 2:51:19 PM org.apache.coyote.http11.Http11Protocol init
  179. INFO: Initializing Coyote HTTP/1.1 on http-8080
  180. Apr 13, 2012 2:51:19 PM org.apache.catalina.startup.Catalina load
  181. INFO: Initialization processed in 391 ms
  182. Apr 13, 2012 2:51:19 PM org.apache.catalina.core.StandardService start
  183. INFO: Starting service Catalina
  184. Apr 13, 2012 2:51:19 PM org.apache.catalina.core.StandardEngine start
  185. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  186. Apr 13, 2012 2:51:19 PM org.apache.catalina.startup.HostConfig deployDescriptor
  187. INFO: Deploying configuration descriptor openmrs.xml
  188. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 14:51:20,450| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  189. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 14:51:20,459| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  190. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 14:51:20,460| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  191. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 14:51:20,563| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  192. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 14:51:20,563| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  193. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 14:51:20,564| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  194. Apr 13, 2012 2:51:20 PM org.apache.catalina.startup.HostConfig deployDescriptor
  195. INFO: Deploying configuration descriptor ROOT.xml
  196. Apr 13, 2012 2:51:20 PM org.apache.catalina.startup.HostConfig deployDescriptor
  197. INFO: Deploying configuration descriptor manager.xml
  198. Apr 13, 2012 2:51:20 PM org.apache.catalina.startup.HostConfig deployDescriptor
  199. INFO: Deploying configuration descriptor host-manager.xml
  200. Apr 13, 2012 2:51:20 PM org.apache.coyote.http11.Http11Protocol start
  201. INFO: Starting Coyote HTTP/1.1 on http-8080
  202. Apr 13, 2012 2:51:20 PM org.apache.catalina.startup.Catalina start
  203. INFO: Server startup in 1499 ms
  204. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 14:56:03,403| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  205. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 14:56:03,404| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  206. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 14:56:08,174| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  207. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 14:56:08,175| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  208. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 14:56:08,175| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  209. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 14:57:00,885| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  210. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 14:57:00,886| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  211. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 14:57:00,886| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  212. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 14:58:54,301| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  213. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 14:58:54,302| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  214. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 14:58:54,302| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  215. ERROR - TestInstallUtil.addTestData(117) |2012-04-13 17:06:53,292| The process terminated abnormally while adding test data
  216. INFO 4/13/12 5:07 PM:liquibase: Reading from `liquibasechangelog`
  217. WARNING 4/13/12 5:07 PM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  218. ERROR - DatabaseUpdater.executeChangelog(237) |2012-04-13 17:07:18,853| Could not release lock
  219. liquibase.exception.LockException: liquibase.exception.LockException: Did not update change log lock correctly.
  220.  
  221. 0 rows were updated instead of the expected 1 row using executor liquibase.executor.jvm.JdbcExecutor there are 0 rows in the table
  222. at liquibase.lockservice.LockService.releaseLock(LockService.java:152)
  223. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:234)
  224. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:164)
  225. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:149)
  226. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1525)
  227. at java.lang.Thread.run(Thread.java:662)
  228. Caused by: liquibase.exception.LockException: Did not update change log lock correctly.
  229.  
  230. 0 rows were updated instead of the expected 1 row using executor liquibase.executor.jvm.JdbcExecutor there are 0 rows in the table
  231. at liquibase.lockservice.LockService.releaseLock(LockService.java:140)
  232. ... 5 more
  233. WARN - InitializationFilter$InitializationCompletion$1.run(1531) |2012-04-13 17:07:18,854| Error while trying to update to the latest database version
  234. org.openmrs.util.DatabaseUpdateException: There was an error while updating the database to the latest. file: liquibase-update-to-latest.xml. Error: liquibase.exception.DatabaseException: Empty result set, expected one row
  235. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:152)
  236. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1525)
  237. at java.lang.Thread.run(Thread.java:662)
  238. Caused by: liquibase.exception.LockException: liquibase.exception.DatabaseException: Empty result set, expected one row
  239. at liquibase.lockservice.LockService.acquireLock(LockService.java:121)
  240. at liquibase.lockservice.LockService.waitForLock(LockService.java:61)
  241. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:216)
  242. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:164)
  243. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:149)
  244. ... 2 more
  245. Caused by: liquibase.exception.DatabaseException: Empty result set, expected one row
  246. at liquibase.util.JdbcUtils.requiredSingleResult(JdbcUtils.java:124)
  247. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:160)
  248. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:168)
  249. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:164)
  250. at liquibase.lockservice.LockService.acquireLock(LockService.java:96)
  251. ... 6 more
  252. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 17:52:41,297| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  253. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 17:52:41,297| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  254. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 17:52:47,828| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  255. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 17:52:47,829| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  256. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 17:52:47,829| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  257. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 17:53:08,996| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  258. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 17:53:08,997| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  259. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 17:53:08,997| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  260. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-13 17:53:21,759| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  261. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-13 17:53:21,760| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  262. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-13 17:53:21,760| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  263. ERROR - TestInstallUtil.addTestData(117) |2012-04-13 20:02:17,220| The process terminated abnormally while adding test data
  264. INFO 4/13/12 8:02 PM:liquibase: Reading from `liquibasechangelog`
  265. WARNING 4/13/12 8:02 PM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  266. ERROR - DatabaseUpdater.executeChangelog(237) |2012-04-13 20:02:37,386| Could not release lock
  267. liquibase.exception.LockException: liquibase.exception.LockException: Did not update change log lock correctly.
  268.  
  269. 0 rows were updated instead of the expected 1 row using executor liquibase.executor.jvm.JdbcExecutor there are 0 rows in the table
  270. at liquibase.lockservice.LockService.releaseLock(LockService.java:152)
  271. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:234)
  272. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:164)
  273. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:149)
  274. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1525)
  275. at java.lang.Thread.run(Thread.java:662)
  276. Caused by: liquibase.exception.LockException: Did not update change log lock correctly.
  277.  
  278. 0 rows were updated instead of the expected 1 row using executor liquibase.executor.jvm.JdbcExecutor there are 0 rows in the table
  279. at liquibase.lockservice.LockService.releaseLock(LockService.java:140)
  280. ... 5 more
  281. WARN - InitializationFilter$InitializationCompletion$1.run(1531) |2012-04-13 20:02:37,390| Error while trying to update to the latest database version
  282. org.openmrs.util.DatabaseUpdateException: There was an error while updating the database to the latest. file: liquibase-update-to-latest.xml. Error: liquibase.exception.DatabaseException: Empty result set, expected one row
  283. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:152)
  284. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1525)
  285. at java.lang.Thread.run(Thread.java:662)
  286. Caused by: liquibase.exception.LockException: liquibase.exception.DatabaseException: Empty result set, expected one row
  287. at liquibase.lockservice.LockService.acquireLock(LockService.java:121)
  288. at liquibase.lockservice.LockService.waitForLock(LockService.java:61)
  289. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:216)
  290. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:164)
  291. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:149)
  292. ... 2 more
  293. Caused by: liquibase.exception.DatabaseException: Empty result set, expected one row
  294. at liquibase.util.JdbcUtils.requiredSingleResult(JdbcUtils.java:124)
  295. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:160)
  296. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:168)
  297. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:164)
  298. at liquibase.lockservice.LockService.acquireLock(LockService.java:96)
  299. ... 6 more
  300. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-16 10:22:52,808| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  301. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-16 10:22:52,809| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  302. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-16 10:23:12,969| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  303. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-16 10:23:12,969| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  304. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-16 10:23:12,970| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  305. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-16 10:23:36,323| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  306. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-16 10:23:36,324| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  307. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-16 10:23:36,324| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  308. Apr 16, 2012 10:39:34 AM org.apache.coyote.http11.Http11Protocol pause
  309. INFO: Pausing Coyote HTTP/1.1 on http-8080
  310. Apr 16, 2012 10:39:41 AM org.apache.catalina.core.AprLifecycleListener init
  311. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  312. Apr 16, 2012 10:39:41 AM org.apache.coyote.http11.Http11Protocol init
  313. INFO: Initializing Coyote HTTP/1.1 on http-8080
  314. Apr 16, 2012 10:39:41 AM org.apache.catalina.startup.Catalina load
  315. INFO: Initialization processed in 990 ms
  316. Apr 16, 2012 10:39:41 AM org.apache.catalina.core.StandardService start
  317. INFO: Starting service Catalina
  318. Apr 16, 2012 10:39:41 AM org.apache.catalina.core.StandardEngine start
  319. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  320. Apr 16, 2012 10:39:41 AM org.apache.catalina.startup.HostConfig deployDescriptor
  321. INFO: Deploying configuration descriptor openmrs.xml
  322. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-16 10:39:43,816| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  323. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-16 10:39:43,854| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  324. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-16 10:39:43,854| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  325. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-16 10:39:44,047| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  326. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-16 10:39:44,048| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  327. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-16 10:39:44,048| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  328. Apr 16, 2012 10:39:44 AM org.apache.catalina.startup.HostConfig deployDescriptor
  329. INFO: Deploying configuration descriptor ROOT.xml
  330. Apr 16, 2012 10:39:44 AM org.apache.catalina.startup.HostConfig deployDescriptor
  331. INFO: Deploying configuration descriptor manager.xml
  332. Apr 16, 2012 10:39:44 AM org.apache.catalina.startup.HostConfig deployDescriptor
  333. INFO: Deploying configuration descriptor host-manager.xml
  334. Apr 16, 2012 10:39:44 AM org.apache.coyote.http11.Http11Protocol start
  335. INFO: Starting Coyote HTTP/1.1 on http-8080
  336. Apr 16, 2012 10:39:44 AM org.apache.catalina.startup.Catalina start
  337. INFO: Server startup in 3024 ms
  338. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-16 10:40:32,947| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  339. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-16 10:40:32,948| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  340. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-16 10:40:36,496| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  341. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-16 10:40:36,496| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  342. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-16 10:40:36,497| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  343. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-16 10:41:27,563| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  344. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-16 10:41:27,564| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  345. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-16 10:41:27,564| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  346. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-16 10:42:49,527| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  347. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-16 10:42:49,528| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  348. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-16 10:42:49,529| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  349. ERROR - TestInstallUtil.addTestData(117) |2012-04-16 13:06:13,138| The process terminated abnormally while adding test data
  350. INFO 4/16/12 1:06 PM:liquibase: Reading from `liquibasechangelog`
  351. WARNING 4/16/12 1:06 PM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  352. ERROR - DatabaseUpdater.executeChangelog(237) |2012-04-16 13:06:35,649| Could not release lock
  353. liquibase.exception.LockException: liquibase.exception.LockException: Did not update change log lock correctly.
  354.  
  355. 0 rows were updated instead of the expected 1 row using executor liquibase.executor.jvm.JdbcExecutor there are 0 rows in the table
  356. at liquibase.lockservice.LockService.releaseLock(LockService.java:152)
  357. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:234)
  358. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:164)
  359. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:149)
  360. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1525)
  361. at java.lang.Thread.run(Thread.java:662)
  362. Caused by: liquibase.exception.LockException: Did not update change log lock correctly.
  363.  
  364. 0 rows were updated instead of the expected 1 row using executor liquibase.executor.jvm.JdbcExecutor there are 0 rows in the table
  365. at liquibase.lockservice.LockService.releaseLock(LockService.java:140)
  366. ... 5 more
  367. WARN - InitializationFilter$InitializationCompletion$1.run(1531) |2012-04-16 13:06:35,651| Error while trying to update to the latest database version
  368. org.openmrs.util.DatabaseUpdateException: There was an error while updating the database to the latest. file: liquibase-update-to-latest.xml. Error: liquibase.exception.DatabaseException: Empty result set, expected one row
  369. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:152)
  370. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1525)
  371. at java.lang.Thread.run(Thread.java:662)
  372. Caused by: liquibase.exception.LockException: liquibase.exception.DatabaseException: Empty result set, expected one row
  373. at liquibase.lockservice.LockService.acquireLock(LockService.java:121)
  374. at liquibase.lockservice.LockService.waitForLock(LockService.java:61)
  375. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:216)
  376. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:164)
  377. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:149)
  378. ... 2 more
  379. Caused by: liquibase.exception.DatabaseException: Empty result set, expected one row
  380. at liquibase.util.JdbcUtils.requiredSingleResult(JdbcUtils.java:124)
  381. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:160)
  382. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:168)
  383. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:164)
  384. at liquibase.lockservice.LockService.acquireLock(LockService.java:96)
  385. ... 6 more
  386. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-16 14:29:07,530| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  387. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-16 14:29:07,531| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  388. Apr 17, 2012 8:35:54 AM org.apache.coyote.http11.Http11Protocol pause
  389. INFO: Pausing Coyote HTTP/1.1 on http-8080
  390. Apr 17, 2012 8:36:07 AM org.apache.catalina.core.AprLifecycleListener init
  391. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  392. Apr 17, 2012 8:36:07 AM org.apache.coyote.http11.Http11Protocol init
  393. INFO: Initializing Coyote HTTP/1.1 on http-8080
  394. Apr 17, 2012 8:36:07 AM org.apache.catalina.startup.Catalina load
  395. INFO: Initialization processed in 1034 ms
  396. Apr 17, 2012 8:36:07 AM org.apache.catalina.core.StandardService start
  397. INFO: Starting service Catalina
  398. Apr 17, 2012 8:36:07 AM org.apache.catalina.core.StandardEngine start
  399. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  400. Apr 17, 2012 8:36:07 AM org.apache.catalina.startup.HostConfig deployDescriptor
  401. INFO: Deploying configuration descriptor openmrs.xml
  402. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 08:36:10,277| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  403. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 08:36:10,312| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  404. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 08:36:10,313| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  405. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 08:36:10,513| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  406. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 08:36:10,514| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  407. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 08:36:10,515| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  408. Apr 17, 2012 8:36:10 AM org.apache.catalina.startup.HostConfig deployDescriptor
  409. INFO: Deploying configuration descriptor ROOT.xml
  410. Apr 17, 2012 8:36:10 AM org.apache.catalina.startup.HostConfig deployDescriptor
  411. INFO: Deploying configuration descriptor manager.xml
  412. Apr 17, 2012 8:36:10 AM org.apache.catalina.startup.HostConfig deployDescriptor
  413. INFO: Deploying configuration descriptor host-manager.xml
  414. Apr 17, 2012 8:36:10 AM org.apache.coyote.http11.Http11Protocol start
  415. INFO: Starting Coyote HTTP/1.1 on http-8080
  416. Apr 17, 2012 8:36:10 AM org.apache.catalina.startup.Catalina start
  417. INFO: Server startup in 3424 ms
  418. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 08:38:05,081| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  419. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 08:38:05,082| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  420. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 08:38:10,535| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  421. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 08:38:10,536| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  422. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 08:38:10,537| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  423. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 08:38:41,675| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  424. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 08:38:41,676| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  425. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 08:38:41,676| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  426. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 08:49:25,320| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  427. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 08:49:25,321| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  428. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 08:49:25,321| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  429. WARN - InitializationFilter.executeStatement(1097) |2012-04-17 08:49:33,705| error executing sql: create user '?'@'localhost' identified by '?'
  430. com.mysql.jdbc.exceptions.jdbc4.MySQLNonTransientConnectionException: Could not create connection to database server. Attempted reconnect 3 times. Giving up.
  431. at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
  432. at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
  433. at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
  434. at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
  435. at com.mysql.jdbc.Util.handleNewInstance(Util.java:406)
  436. at com.mysql.jdbc.Util.getInstance(Util.java:381)
  437. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:984)
  438. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:956)
  439. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:926)
  440. at com.mysql.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:2364)
  441. at com.mysql.jdbc.ConnectionImpl.<init>(ConnectionImpl.java:773)
  442. at com.mysql.jdbc.JDBC4Connection.<init>(JDBC4Connection.java:46)
  443. at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
  444. at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
  445. at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
  446. at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
  447. at com.mysql.jdbc.Util.handleNewInstance(Util.java:406)
  448. at com.mysql.jdbc.ConnectionImpl.getInstance(ConnectionImpl.java:352)
  449. at com.mysql.jdbc.NonRegisteringDriver.connect(NonRegisteringDriver.java:282)
  450. at java.sql.DriverManager.getConnection(DriverManager.java:582)
  451. at java.sql.DriverManager.getConnection(DriverManager.java:185)
  452. at org.openmrs.web.filter.initialization.InitializationFilter.executeStatement(InitializationFilter.java:1082)
  453. at org.openmrs.web.filter.initialization.InitializationFilter.access$200(InitializationFilter.java:84)
  454. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1327)
  455. at java.lang.Thread.run(Thread.java:662)
  456. Caused by: com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: Unknown database 'amrs'
  457. at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
  458. at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
  459. at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
  460. at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
  461. at com.mysql.jdbc.Util.handleNewInstance(Util.java:406)
  462. at com.mysql.jdbc.Util.getInstance(Util.java:381)
  463. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1030)
  464. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:956)
  465. at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3536)
  466. at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3468)
  467. at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:917)
  468. at com.mysql.jdbc.MysqlIO.secureAuth411(MysqlIO.java:3974)
  469. at com.mysql.jdbc.MysqlIO.doHandshake(MysqlIO.java:1282)
  470. at com.mysql.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:2292)
  471. ... 15 more
  472. Apr 17, 2012 9:01:39 AM org.apache.catalina.core.AprLifecycleListener init
  473. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  474. Apr 17, 2012 9:01:39 AM org.apache.coyote.http11.Http11Protocol init
  475. INFO: Initializing Coyote HTTP/1.1 on http-8080
  476. Apr 17, 2012 9:01:39 AM org.apache.catalina.startup.Catalina load
  477. INFO: Initialization processed in 391 ms
  478. Apr 17, 2012 9:01:39 AM org.apache.catalina.core.StandardService start
  479. INFO: Starting service Catalina
  480. Apr 17, 2012 9:01:39 AM org.apache.catalina.core.StandardEngine start
  481. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  482. Apr 17, 2012 9:01:39 AM org.apache.catalina.startup.HostConfig deployDescriptor
  483. INFO: Deploying configuration descriptor openmrs.xml
  484. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 09:01:40,523| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  485. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 09:01:40,532| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  486. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 09:01:40,533| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  487. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 09:01:40,639| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  488. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 09:01:40,639| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  489. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 09:01:40,640| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  490. Apr 17, 2012 9:01:40 AM org.apache.catalina.startup.HostConfig deployDescriptor
  491. INFO: Deploying configuration descriptor ROOT.xml
  492. Apr 17, 2012 9:01:40 AM org.apache.catalina.startup.HostConfig deployDescriptor
  493. INFO: Deploying configuration descriptor manager.xml
  494. Apr 17, 2012 9:01:40 AM org.apache.catalina.startup.HostConfig deployDescriptor
  495. INFO: Deploying configuration descriptor host-manager.xml
  496. Apr 17, 2012 9:01:40 AM org.apache.coyote.http11.Http11Protocol start
  497. INFO: Starting Coyote HTTP/1.1 on http-8080
  498. Apr 17, 2012 9:01:40 AM org.apache.catalina.startup.Catalina start
  499. INFO: Server startup in 1519 ms
  500. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 09:02:08,072| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  501. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 09:02:08,072| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  502. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 09:02:13,121| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  503. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 09:02:13,122| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  504. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 09:02:13,122| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  505. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 09:03:01,347| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  506. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 09:03:01,348| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  507. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 09:03:01,348| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  508. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 09:04:43,816| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  509. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 09:04:43,817| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  510. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 09:04:43,817| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  511. Apr 17, 2012 10:17:34 AM org.apache.catalina.loader.WebappClassLoader clearReferencesJdbc
  512. SEVERE: A web application registered the JBDC driver [org.postgresql.Driver] but failed to unregister it when the web application was stopped. To prevent a memory leak, the JDBC Driver has been forcibly unregistered.
  513. Apr 17, 2012 10:17:34 AM org.apache.catalina.loader.WebappClassLoader clearReferencesJdbc
  514. SEVERE: A web application registered the JBDC driver [com.mysql.jdbc.Driver] but failed to unregister it when the web application was stopped. To prevent a memory leak, the JDBC Driver has been forcibly unregistered.
  515. Apr 17, 2012 10:17:34 AM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads
  516. SEVERE: A web application appears to have started a thread named [Thread-9] but has failed to stop it. This is very likely to create a memory leak.
  517. Apr 17, 2012 10:17:34 AM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads
  518. SEVERE: A web application appears to have started a thread named [MySQL Statement Cancellation Timer] but has failed to stop it. This is very likely to create a memory leak.
  519. Apr 17, 2012 10:17:34 AM org.apache.catalina.startup.HostConfig checkResources
  520. INFO: Undeploying context [/openmrs]
  521. Apr 17, 2012 10:20:00 AM org.apache.catalina.startup.HostConfig deployWAR
  522. INFO: Deploying web application archive openmrs.war
  523. WARN - OpenmrsUtil.getRuntimeProperties(2274) |2012-04-17 10:20:01,864| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  524. WARN - OpenmrsUtil.getRuntimeProperties(2304) |2012-04-17 10:20:01,870| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  525. WARN - OpenmrsUtil.getRuntimeProperties(2321) |2012-04-17 10:20:01,870| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  526. WARN - OpenmrsUtil.getRuntimeProperties(2274) |2012-04-17 10:20:01,958| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  527. WARN - OpenmrsUtil.getRuntimeProperties(2304) |2012-04-17 10:20:01,959| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  528. WARN - OpenmrsUtil.getRuntimeProperties(2321) |2012-04-17 10:20:01,959| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  529. ERROR - Context.getServiceContext(253) |2012-04-17 10:21:15,298| serviceContext is null. Creating new ServiceContext()
  530. WARN - InitializationFilter.executeStatement(572) |2012-04-17 10:21:22,682| error executing sql: create database if not exists `?` default character set utf8
  531. com.mysql.jdbc.exceptions.jdbc4.MySQLNonTransientConnectionException: Could not create connection to database server. Attempted reconnect 3 times. Giving up.
  532. at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
  533. at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
  534. at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
  535. at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
  536. at com.mysql.jdbc.Util.handleNewInstance(Util.java:406)
  537. at com.mysql.jdbc.Util.getInstance(Util.java:381)
  538. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:984)
  539. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:956)
  540. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:926)
  541. at com.mysql.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:2364)
  542. at com.mysql.jdbc.ConnectionImpl.<init>(ConnectionImpl.java:773)
  543. at com.mysql.jdbc.JDBC4Connection.<init>(JDBC4Connection.java:46)
  544. at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
  545. at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
  546. at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
  547. at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
  548. at com.mysql.jdbc.Util.handleNewInstance(Util.java:406)
  549. at com.mysql.jdbc.ConnectionImpl.getInstance(ConnectionImpl.java:352)
  550. at com.mysql.jdbc.NonRegisteringDriver.connect(NonRegisteringDriver.java:282)
  551. at java.sql.DriverManager.getConnection(DriverManager.java:582)
  552. at java.sql.DriverManager.getConnection(DriverManager.java:185)
  553. at org.openmrs.web.filter.initialization.InitializationFilter.executeStatement(InitializationFilter.java:557)
  554. at org.openmrs.web.filter.initialization.InitializationFilter.access$100(InitializationFilter.java:71)
  555. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:768)
  556. at java.lang.Thread.run(Thread.java:662)
  557. Caused by: java.sql.SQLException: Access denied for user 'root'@'localhost' (using password: YES)
  558. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1055)
  559. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:956)
  560. at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3536)
  561. at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3468)
  562. at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:917)
  563. at com.mysql.jdbc.MysqlIO.secureAuth411(MysqlIO.java:3974)
  564. at com.mysql.jdbc.MysqlIO.doHandshake(MysqlIO.java:1282)
  565. at com.mysql.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:2292)
  566. ... 15 more
  567. WARN - InitializationFilter.executeStatement(572) |2012-04-17 10:22:40,014| error executing sql: create database if not exists `?` default character set utf8
  568. com.mysql.jdbc.exceptions.jdbc4.MySQLNonTransientConnectionException: Could not create connection to database server. Attempted reconnect 3 times. Giving up.
  569. at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
  570. at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
  571. at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
  572. at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
  573. at com.mysql.jdbc.Util.handleNewInstance(Util.java:406)
  574. at com.mysql.jdbc.Util.getInstance(Util.java:381)
  575. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:984)
  576. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:956)
  577. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:926)
  578. at com.mysql.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:2364)
  579. at com.mysql.jdbc.ConnectionImpl.<init>(ConnectionImpl.java:773)
  580. at com.mysql.jdbc.JDBC4Connection.<init>(JDBC4Connection.java:46)
  581. at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
  582. at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
  583. at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
  584. at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
  585. at com.mysql.jdbc.Util.handleNewInstance(Util.java:406)
  586. at com.mysql.jdbc.ConnectionImpl.getInstance(ConnectionImpl.java:352)
  587. at com.mysql.jdbc.NonRegisteringDriver.connect(NonRegisteringDriver.java:282)
  588. at java.sql.DriverManager.getConnection(DriverManager.java:582)
  589. at java.sql.DriverManager.getConnection(DriverManager.java:185)
  590. at org.openmrs.web.filter.initialization.InitializationFilter.executeStatement(InitializationFilter.java:557)
  591. at org.openmrs.web.filter.initialization.InitializationFilter.access$100(InitializationFilter.java:71)
  592. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:768)
  593. at java.lang.Thread.run(Thread.java:662)
  594. Caused by: java.sql.SQLException: Access denied for user 'root'@'localhost' (using password: YES)
  595. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1055)
  596. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:956)
  597. at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3536)
  598. at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3468)
  599. at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:917)
  600. at com.mysql.jdbc.MysqlIO.secureAuth411(MysqlIO.java:3974)
  601. at com.mysql.jdbc.MysqlIO.doHandshake(MysqlIO.java:1282)
  602. at com.mysql.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:2292)
  603. ... 15 more
  604. Apr 17, 2012 10:33:47 AM org.apache.catalina.core.AprLifecycleListener init
  605. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  606. Apr 17, 2012 10:33:47 AM org.apache.coyote.http11.Http11Protocol init
  607. INFO: Initializing Coyote HTTP/1.1 on http-8080
  608. Apr 17, 2012 10:33:47 AM org.apache.catalina.startup.Catalina load
  609. INFO: Initialization processed in 402 ms
  610. Apr 17, 2012 10:33:47 AM org.apache.catalina.core.StandardService start
  611. INFO: Starting service Catalina
  612. Apr 17, 2012 10:33:47 AM org.apache.catalina.core.StandardEngine start
  613. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  614. Apr 17, 2012 10:33:47 AM org.apache.catalina.startup.HostConfig deployDescriptor
  615. INFO: Deploying configuration descriptor openmrs.xml
  616. WARN - OpenmrsUtil.getRuntimeProperties(2274) |2012-04-17 10:33:48,571| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  617. WARN - OpenmrsUtil.getRuntimeProperties(2304) |2012-04-17 10:33:48,579| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  618. WARN - OpenmrsUtil.getRuntimeProperties(2321) |2012-04-17 10:33:48,580| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  619. WARN - OpenmrsUtil.getRuntimeProperties(2274) |2012-04-17 10:33:48,685| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  620. WARN - OpenmrsUtil.getRuntimeProperties(2304) |2012-04-17 10:33:48,686| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  621. WARN - OpenmrsUtil.getRuntimeProperties(2321) |2012-04-17 10:33:48,686| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  622. Apr 17, 2012 10:33:48 AM org.apache.catalina.startup.HostConfig deployDescriptor
  623. INFO: Deploying configuration descriptor ROOT.xml
  624. Apr 17, 2012 10:33:48 AM org.apache.catalina.startup.HostConfig deployDescriptor
  625. INFO: Deploying configuration descriptor manager.xml
  626. Apr 17, 2012 10:33:48 AM org.apache.catalina.startup.HostConfig deployDescriptor
  627. INFO: Deploying configuration descriptor host-manager.xml
  628. Apr 17, 2012 10:33:48 AM org.apache.coyote.http11.Http11Protocol start
  629. INFO: Starting Coyote HTTP/1.1 on http-8080
  630. Apr 17, 2012 10:33:48 AM org.apache.catalina.startup.Catalina start
  631. INFO: Server startup in 1467 ms
  632. Apr 17, 2012 10:43:02 AM org.apache.catalina.loader.WebappClassLoader clearReferencesJdbc
  633. SEVERE: A web application registered the JBDC driver [com.mysql.jdbc.Driver] but failed to unregister it when the web application was stopped. To prevent a memory leak, the JDBC Driver has been forcibly unregistered.
  634. Apr 17, 2012 10:43:03 AM org.apache.catalina.startup.HostConfig checkResources
  635. INFO: Undeploying context [/openmrs]
  636. Apr 17, 2012 10:43:34 AM org.apache.catalina.startup.HostConfig deployWAR
  637. INFO: Deploying web application archive openmrs.war
  638. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 10:43:35,991| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  639. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 10:43:35,998| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  640. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 10:43:35,998| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  641. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 10:43:36,091| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  642. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 10:43:36,092| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  643. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 10:43:36,092| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  644. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 10:44:07,710| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  645. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 10:44:07,711| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  646. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 10:44:11,386| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  647. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 10:44:11,387| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  648. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 10:44:11,387| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  649. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 10:45:35,278| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  650. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 10:45:35,279| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  651. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 10:45:35,279| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  652. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 10:46:16,017| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  653. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 10:46:16,018| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  654. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 10:46:16,019| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  655. Apr 17, 2012 11:32:49 AM org.apache.catalina.core.AprLifecycleListener init
  656. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  657. Apr 17, 2012 11:32:49 AM org.apache.coyote.http11.Http11Protocol init
  658. INFO: Initializing Coyote HTTP/1.1 on http-8080
  659. Apr 17, 2012 11:32:49 AM org.apache.catalina.startup.Catalina load
  660. INFO: Initialization processed in 396 ms
  661. Apr 17, 2012 11:32:49 AM org.apache.catalina.core.StandardService start
  662. INFO: Starting service Catalina
  663. Apr 17, 2012 11:32:49 AM org.apache.catalina.core.StandardEngine start
  664. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  665. Apr 17, 2012 11:32:49 AM org.apache.catalina.startup.HostConfig deployDescriptor
  666. INFO: Deploying configuration descriptor openmrs.xml
  667. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 11:32:50,387| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  668. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 11:32:50,396| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  669. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 11:32:50,397| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  670. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 11:32:50,503| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  671. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 11:32:50,503| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  672. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 11:32:50,504| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  673. Apr 17, 2012 11:32:50 AM org.apache.catalina.startup.HostConfig deployDescriptor
  674. INFO: Deploying configuration descriptor ROOT.xml
  675. Apr 17, 2012 11:32:50 AM org.apache.catalina.startup.HostConfig deployDescriptor
  676. INFO: Deploying configuration descriptor manager.xml
  677. Apr 17, 2012 11:32:50 AM org.apache.catalina.startup.HostConfig deployDescriptor
  678. INFO: Deploying configuration descriptor host-manager.xml
  679. Apr 17, 2012 11:32:50 AM org.apache.coyote.http11.Http11Protocol start
  680. INFO: Starting Coyote HTTP/1.1 on http-8080
  681. Apr 17, 2012 11:32:50 AM org.apache.catalina.startup.Catalina start
  682. INFO: Server startup in 1507 ms
  683. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 11:33:19,708| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  684. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 11:33:19,709| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  685. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 11:33:23,523| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  686. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 11:33:23,523| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  687. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 11:33:23,524| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  688. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 11:34:07,346| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  689. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 11:34:07,346| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  690. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 11:34:07,347| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  691. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 11:38:04,172| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  692. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 11:38:04,173| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  693. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 11:38:04,174| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  694. Apr 17, 2012 11:45:25 AM org.apache.catalina.core.AprLifecycleListener init
  695. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  696. Apr 17, 2012 11:45:25 AM org.apache.coyote.http11.Http11Protocol init
  697. INFO: Initializing Coyote HTTP/1.1 on http-8080
  698. Apr 17, 2012 11:45:25 AM org.apache.catalina.startup.Catalina load
  699. INFO: Initialization processed in 390 ms
  700. Apr 17, 2012 11:45:25 AM org.apache.catalina.core.StandardService start
  701. INFO: Starting service Catalina
  702. Apr 17, 2012 11:45:25 AM org.apache.catalina.core.StandardEngine start
  703. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  704. Apr 17, 2012 11:45:25 AM org.apache.catalina.startup.HostConfig deployDescriptor
  705. INFO: Deploying configuration descriptor openmrs.xml
  706. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 11:45:26,454| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  707. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 11:45:26,464| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  708. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 11:45:26,464| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  709. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 11:45:26,570| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  710. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 11:45:26,571| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  711. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 11:45:26,571| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  712. Apr 17, 2012 11:45:26 AM org.apache.catalina.startup.HostConfig deployDescriptor
  713. INFO: Deploying configuration descriptor ROOT.xml
  714. Apr 17, 2012 11:45:26 AM org.apache.catalina.startup.HostConfig deployDescriptor
  715. INFO: Deploying configuration descriptor manager.xml
  716. Apr 17, 2012 11:45:26 AM org.apache.catalina.startup.HostConfig deployDescriptor
  717. INFO: Deploying configuration descriptor host-manager.xml
  718. Apr 17, 2012 11:45:26 AM org.apache.coyote.http11.Http11Protocol start
  719. INFO: Starting Coyote HTTP/1.1 on http-8080
  720. Apr 17, 2012 11:45:26 AM org.apache.catalina.startup.Catalina start
  721. INFO: Server startup in 1504 ms
  722. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 11:50:24,913| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  723. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 11:50:24,914| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  724. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 11:50:37,853| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  725. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 11:50:37,853| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  726. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 11:50:37,854| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  727. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 11:51:18,703| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  728. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 11:51:18,703| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  729. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 11:51:18,704| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  730. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 11:51:53,600| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  731. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 11:51:53,600| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  732. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 11:51:53,601| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  733. ERROR - TestInstallUtil.addTestData(117) |2012-04-17 13:53:01,142| The process terminated abnormally while adding test data
  734. INFO 4/17/12 1:53 PM:liquibase: Reading from `liquibasechangelog`
  735. WARNING 4/17/12 1:53 PM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  736. ERROR - DatabaseUpdater.executeChangelog(237) |2012-04-17 13:53:22,221| Could not release lock
  737. liquibase.exception.LockException: liquibase.exception.LockException: Did not update change log lock correctly.
  738.  
  739. 0 rows were updated instead of the expected 1 row using executor liquibase.executor.jvm.JdbcExecutor there are 0 rows in the table
  740. at liquibase.lockservice.LockService.releaseLock(LockService.java:152)
  741. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:234)
  742. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:164)
  743. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:149)
  744. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1525)
  745. at java.lang.Thread.run(Thread.java:662)
  746. Caused by: liquibase.exception.LockException: Did not update change log lock correctly.
  747.  
  748. 0 rows were updated instead of the expected 1 row using executor liquibase.executor.jvm.JdbcExecutor there are 0 rows in the table
  749. at liquibase.lockservice.LockService.releaseLock(LockService.java:140)
  750. ... 5 more
  751. WARN - InitializationFilter$InitializationCompletion$1.run(1531) |2012-04-17 13:53:22,239| Error while trying to update to the latest database version
  752. org.openmrs.util.DatabaseUpdateException: There was an error while updating the database to the latest. file: liquibase-update-to-latest.xml. Error: liquibase.exception.DatabaseException: Empty result set, expected one row
  753. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:152)
  754. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1525)
  755. at java.lang.Thread.run(Thread.java:662)
  756. Caused by: liquibase.exception.LockException: liquibase.exception.DatabaseException: Empty result set, expected one row
  757. at liquibase.lockservice.LockService.acquireLock(LockService.java:121)
  758. at liquibase.lockservice.LockService.waitForLock(LockService.java:61)
  759. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:216)
  760. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:164)
  761. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:149)
  762. ... 2 more
  763. Caused by: liquibase.exception.DatabaseException: Empty result set, expected one row
  764. at liquibase.util.JdbcUtils.requiredSingleResult(JdbcUtils.java:124)
  765. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:160)
  766. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:168)
  767. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:164)
  768. at liquibase.lockservice.LockService.acquireLock(LockService.java:96)
  769. ... 6 more
  770. java.util.logging.ErrorManager: 1: FileHandler is closed or not yet initialized, unable to log [Apr 17, 2012 3:35:20 PM org.apache.coyote.http11.Http11Protocol pause
  771. INFO: Pausing Coyote HTTP/1.1 on http-8080
  772. ]
  773. Apr 17, 2012 3:35:20 PM org.apache.coyote.http11.Http11Protocol pause
  774. INFO: Pausing Coyote HTTP/1.1 on http-8080
  775. Apr 17, 2012 3:35:26 PM org.apache.catalina.core.AprLifecycleListener init
  776. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  777. Apr 17, 2012 3:35:26 PM org.apache.coyote.http11.Http11Protocol init
  778. INFO: Initializing Coyote HTTP/1.1 on http-8080
  779. Apr 17, 2012 3:35:26 PM org.apache.catalina.startup.Catalina load
  780. INFO: Initialization processed in 931 ms
  781. Apr 17, 2012 3:35:26 PM org.apache.catalina.core.StandardService start
  782. INFO: Starting service Catalina
  783. Apr 17, 2012 3:35:26 PM org.apache.catalina.core.StandardEngine start
  784. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  785. Apr 17, 2012 3:35:26 PM org.apache.catalina.startup.HostConfig deployDescriptor
  786. INFO: Deploying configuration descriptor openmrs.xml
  787. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 15:35:28,504| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  788. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 15:35:28,514| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  789. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 15:35:28,514| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  790. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 15:35:28,670| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  791. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 15:35:28,670| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  792. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 15:35:28,671| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  793. Apr 17, 2012 3:35:28 PM org.apache.catalina.startup.HostConfig deployDescriptor
  794. INFO: Deploying configuration descriptor ROOT.xml
  795. Apr 17, 2012 3:35:28 PM org.apache.catalina.startup.HostConfig deployDescriptor
  796. INFO: Deploying configuration descriptor manager.xml
  797. Apr 17, 2012 3:35:28 PM org.apache.catalina.startup.HostConfig deployDescriptor
  798. INFO: Deploying configuration descriptor host-manager.xml
  799. Apr 17, 2012 3:35:28 PM org.apache.coyote.http11.Http11Protocol start
  800. INFO: Starting Coyote HTTP/1.1 on http-8080
  801. Apr 17, 2012 3:35:28 PM org.apache.catalina.startup.Catalina start
  802. INFO: Server startup in 2683 ms
  803. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 15:44:05,956| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  804. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 15:44:05,957| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  805. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 15:44:10,282| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  806. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 15:44:10,282| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  807. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 15:44:10,283| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  808. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 15:45:56,248| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  809. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 15:45:56,249| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  810. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 15:45:56,249| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  811. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 15:46:49,482| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  812. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 15:46:49,482| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  813. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 15:46:49,483| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  814. WARN - InitializationFilter.executeStatement(1097) |2012-04-17 15:46:49,943| error executing sql: create user '?'@'localhost' identified by '?'
  815. com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: Table 'mysql.user' doesn't exist
  816. at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
  817. at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
  818. at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
  819. at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
  820. at com.mysql.jdbc.Util.handleNewInstance(Util.java:406)
  821. at com.mysql.jdbc.Util.getInstance(Util.java:381)
  822. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1030)
  823. at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:956)
  824. at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3536)
  825. at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3468)
  826. at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:1957)
  827. at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2107)
  828. at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2642)
  829. at com.mysql.jdbc.StatementImpl.executeUpdate(StatementImpl.java:1634)
  830. at com.mysql.jdbc.StatementImpl.executeUpdate(StatementImpl.java:1553)
  831. at org.openmrs.web.filter.initialization.InitializationFilter.executeStatement(InitializationFilter.java:1091)
  832. at org.openmrs.web.filter.initialization.InitializationFilter.access$200(InitializationFilter.java:84)
  833. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1327)
  834. at java.lang.Thread.run(Thread.java:662)
  835. Apr 17, 2012 4:02:21 PM org.apache.coyote.http11.Http11Protocol pause
  836. INFO: Pausing Coyote HTTP/1.1 on http-8080
  837. Apr 17, 2012 4:02:25 PM org.apache.catalina.core.AprLifecycleListener init
  838. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  839. Apr 17, 2012 4:02:25 PM org.apache.coyote.http11.Http11Protocol init
  840. INFO: Initializing Coyote HTTP/1.1 on http-8080
  841. Apr 17, 2012 4:02:25 PM org.apache.catalina.startup.Catalina load
  842. INFO: Initialization processed in 390 ms
  843. Apr 17, 2012 4:02:25 PM org.apache.catalina.core.StandardService start
  844. INFO: Starting service Catalina
  845. Apr 17, 2012 4:02:25 PM org.apache.catalina.core.StandardEngine start
  846. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  847. Apr 17, 2012 4:02:25 PM org.apache.catalina.startup.HostConfig deployDescriptor
  848. INFO: Deploying configuration descriptor openmrs.xml
  849. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 16:02:26,374| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  850. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 16:02:26,384| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  851. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 16:02:26,384| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  852. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 16:02:26,488| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  853. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 16:02:26,488| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  854. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 16:02:26,489| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  855. Apr 17, 2012 4:02:26 PM org.apache.catalina.startup.HostConfig deployDescriptor
  856. INFO: Deploying configuration descriptor ROOT.xml
  857. Apr 17, 2012 4:02:26 PM org.apache.catalina.startup.HostConfig deployDescriptor
  858. INFO: Deploying configuration descriptor manager.xml
  859. Apr 17, 2012 4:02:26 PM org.apache.catalina.startup.HostConfig deployDescriptor
  860. INFO: Deploying configuration descriptor host-manager.xml
  861. Apr 17, 2012 4:02:26 PM org.apache.coyote.http11.Http11Protocol start
  862. INFO: Starting Coyote HTTP/1.1 on http-8080
  863. Apr 17, 2012 4:02:26 PM org.apache.catalina.startup.Catalina start
  864. INFO: Server startup in 1496 ms
  865. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 16:08:15,649| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  866. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 16:08:15,650| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  867. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 16:08:19,475| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  868. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 16:08:19,476| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  869. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 16:08:19,476| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  870. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 16:08:57,489| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  871. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 16:08:57,490| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  872. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 16:08:57,490| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  873. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-17 16:10:58,198| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  874. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-17 16:10:58,199| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  875. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-17 16:10:58,199| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  876. ERROR - TestInstallUtil.addTestData(117) |2012-04-17 18:21:16,941| The process terminated abnormally while adding test data
  877. INFO 4/17/12 6:21 PM:liquibase: Reading from `liquibasechangelog`
  878. WARNING 4/17/12 6:21 PM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  879. ERROR - DatabaseUpdater.executeChangelog(237) |2012-04-17 18:21:40,011| Could not release lock
  880. liquibase.exception.LockException: liquibase.exception.LockException: Did not update change log lock correctly.
  881.  
  882. 0 rows were updated instead of the expected 1 row using executor liquibase.executor.jvm.JdbcExecutor there are 0 rows in the table
  883. at liquibase.lockservice.LockService.releaseLock(LockService.java:152)
  884. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:234)
  885. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:164)
  886. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:149)
  887. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1525)
  888. at java.lang.Thread.run(Thread.java:662)
  889. Caused by: liquibase.exception.LockException: Did not update change log lock correctly.
  890.  
  891. 0 rows were updated instead of the expected 1 row using executor liquibase.executor.jvm.JdbcExecutor there are 0 rows in the table
  892. at liquibase.lockservice.LockService.releaseLock(LockService.java:140)
  893. ... 5 more
  894. WARN - InitializationFilter$InitializationCompletion$1.run(1531) |2012-04-17 18:21:40,013| Error while trying to update to the latest database version
  895. org.openmrs.util.DatabaseUpdateException: There was an error while updating the database to the latest. file: liquibase-update-to-latest.xml. Error: liquibase.exception.DatabaseException: Empty result set, expected one row
  896. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:152)
  897. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1525)
  898. at java.lang.Thread.run(Thread.java:662)
  899. Caused by: liquibase.exception.LockException: liquibase.exception.DatabaseException: Empty result set, expected one row
  900. at liquibase.lockservice.LockService.acquireLock(LockService.java:121)
  901. at liquibase.lockservice.LockService.waitForLock(LockService.java:61)
  902. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:216)
  903. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:164)
  904. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:149)
  905. ... 2 more
  906. Caused by: liquibase.exception.DatabaseException: Empty result set, expected one row
  907. at liquibase.util.JdbcUtils.requiredSingleResult(JdbcUtils.java:124)
  908. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:160)
  909. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:168)
  910. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:164)
  911. at liquibase.lockservice.LockService.acquireLock(LockService.java:96)
  912. ... 6 more
  913. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-18 08:16:10,513| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  914. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-18 08:16:10,513| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  915. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-18 08:16:28,013| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  916. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-18 08:16:28,014| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  917. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-18 08:16:28,014| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  918. ERROR - Context.getServiceContext(255) |2012-04-18 08:17:45,833| serviceContext is null. Creating new ServiceContext()
  919. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-18 08:53:10,902| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  920. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-18 08:53:10,903| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  921. Apr 18, 2012 5:04:54 PM org.apache.coyote.http11.Http11Protocol pause
  922. INFO: Pausing Coyote HTTP/1.1 on http-8080
  923. Apr 18, 2012 5:10:46 PM org.apache.catalina.core.AprLifecycleListener init
  924. INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64/server:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/lib/amd64:/usr/lib/jvm/java-6-sun-1.6.0.26/jre/../lib/amd64:/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib
  925. Apr 18, 2012 5:10:46 PM org.apache.coyote.http11.Http11Protocol init
  926. INFO: Initializing Coyote HTTP/1.1 on http-8080
  927. Apr 18, 2012 5:10:46 PM org.apache.catalina.startup.Catalina load
  928. INFO: Initialization processed in 970 ms
  929. Apr 18, 2012 5:10:46 PM org.apache.catalina.core.StandardService start
  930. INFO: Starting service Catalina
  931. Apr 18, 2012 5:10:46 PM org.apache.catalina.core.StandardEngine start
  932. INFO: Starting Servlet Engine: Apache Tomcat/6.0.24
  933. Apr 18, 2012 5:10:46 PM org.apache.catalina.startup.HostConfig deployDescriptor
  934. INFO: Deploying configuration descriptor openmrs.xml
  935. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-18 17:10:48,993| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  936. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-18 17:10:49,002| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  937. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-18 17:10:49,003| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  938. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-18 17:10:49,159| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  939. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-18 17:10:49,160| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  940. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-18 17:10:49,160| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  941. Apr 18, 2012 5:10:49 PM org.apache.catalina.startup.HostConfig deployDescriptor
  942. INFO: Deploying configuration descriptor ROOT.xml
  943. Apr 18, 2012 5:10:49 PM org.apache.catalina.startup.HostConfig deployDescriptor
  944. INFO: Deploying configuration descriptor manager.xml
  945. Apr 18, 2012 5:10:49 PM org.apache.catalina.startup.HostConfig deployDescriptor
  946. INFO: Deploying configuration descriptor host-manager.xml
  947. Apr 18, 2012 5:10:49 PM org.apache.coyote.http11.Http11Protocol start
  948. INFO: Starting Coyote HTTP/1.1 on http-8080
  949. Apr 18, 2012 5:10:49 PM org.apache.catalina.startup.Catalina start
  950. INFO: Server startup in 2792 ms
  951. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-18 17:11:44,412| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  952. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-18 17:11:44,413| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  953. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-18 17:11:48,106| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  954. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-18 17:11:48,107| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  955. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-18 17:11:48,107| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  956. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-18 17:13:05,152| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  957. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-18 17:13:05,153| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  958. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-18 17:13:05,153| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  959. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-18 17:13:56,762| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  960. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-18 17:13:56,763| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
  961. WARN - OpenmrsUtil.getRuntimeProperties(2401) |2012-04-18 17:13:56,764| Unable to find a runtime properties file. Initial setup is needed. View the webapp to run the setup wizard.
  962. ERROR - TestInstallUtil.addTestData(117) |2012-04-18 19:19:47,558| The process terminated abnormally while adding test data
  963. INFO 4/18/12 7:20 PM:liquibase: Reading from `liquibasechangelog`
  964. WARNING 4/18/12 7:20 PM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  965. ERROR - DatabaseUpdater.executeChangelog(237) |2012-04-18 19:20:12,208| Could not release lock
  966. liquibase.exception.LockException: liquibase.exception.LockException: Did not update change log lock correctly.
  967.  
  968. 0 rows were updated instead of the expected 1 row using executor liquibase.executor.jvm.JdbcExecutor there are 0 rows in the table
  969. at liquibase.lockservice.LockService.releaseLock(LockService.java:152)
  970. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:234)
  971. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:164)
  972. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:149)
  973. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1525)
  974. at java.lang.Thread.run(Thread.java:662)
  975. Caused by: liquibase.exception.LockException: Did not update change log lock correctly.
  976.  
  977. 0 rows were updated instead of the expected 1 row using executor liquibase.executor.jvm.JdbcExecutor there are 0 rows in the table
  978. at liquibase.lockservice.LockService.releaseLock(LockService.java:140)
  979. ... 5 more
  980. WARN - InitializationFilter$InitializationCompletion$1.run(1531) |2012-04-18 19:20:12,208| Error while trying to update to the latest database version
  981. org.openmrs.util.DatabaseUpdateException: There was an error while updating the database to the latest. file: liquibase-update-to-latest.xml. Error: liquibase.exception.DatabaseException: Empty result set, expected one row
  982. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:152)
  983. at org.openmrs.web.filter.initialization.InitializationFilter$InitializationCompletion$1.run(InitializationFilter.java:1525)
  984. at java.lang.Thread.run(Thread.java:662)
  985. Caused by: liquibase.exception.LockException: liquibase.exception.DatabaseException: Empty result set, expected one row
  986. at liquibase.lockservice.LockService.acquireLock(LockService.java:121)
  987. at liquibase.lockservice.LockService.waitForLock(LockService.java:61)
  988. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:216)
  989. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:164)
  990. at org.openmrs.util.DatabaseUpdater.executeChangelog(DatabaseUpdater.java:149)
  991. ... 2 more
  992. Caused by: liquibase.exception.DatabaseException: Empty result set, expected one row
  993. at liquibase.util.JdbcUtils.requiredSingleResult(JdbcUtils.java:124)
  994. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:160)
  995. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:168)
  996. at liquibase.executor.jvm.JdbcExecutor.queryForObject(JdbcExecutor.java:164)
  997. at liquibase.lockservice.LockService.acquireLock(LockService.java:96)
  998. ... 6 more
  999. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2438) |2012-04-19 08:27:18,826| Unable to find a runtime properties file at /var/lib/tomcat6/openmrs-runtime.properties
  1000. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2464) |2012-04-19 08:27:18,827| Unable to find properties file: /usr/share/tomcat6/.OpenMRS/openmrs-runtime.properties
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