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$ python setup.py build_ext --inplace

lamiastella
Jan 12th, 2021
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  1. [3645:3637 0:2090] 11:04:08 Tue Jan 12 [mona@goku:pts/0 +1] ~/mesh-fusion/libfusiongpu
  2. $ python setup.py build_ext --inplace
  3. Added OpenMP
  4. running build_ext
  5. skipping 'cyfusion.cpp' Cython extension (up-to-date)
  6. building 'cyfusion' extension
  7. x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/mona/venv/tsdf/lib/python3.8/site-packages/numpy/core/include -I/home/mona/venv/tsdf/include -I/usr/include/python3.8 -c cyfusion.cpp -o build/temp.linux-x86_64-3.8/cyfusion.o -ffast-math -msse -msse2 -msse3 -msse4.2 -fopenmp
  8. In file included from /home/mona/venv/tsdf/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
  9. from /home/mona/venv/tsdf/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
  10. from /home/mona/venv/tsdf/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:4,
  11. from cyfusion.cpp:531:
  12. /home/mona/venv/tsdf/lib/python3.8/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
  13. 17 | #warning "Using deprecated NumPy API, disable it with " \
  14. | ^~~~~~~
  15. cyfusion.cpp: In function ‘PyObject* PyInit_cyfusion()’:
  16. cyfusion.cpp:22866:32: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  17. 22866 | __pyx_type_8cyfusion_PyViews.tp_print = 0;
  18. | ^~~~~~~~
  19. In file included from /usr/include/python3.8/object.h:746,
  20. from /usr/include/python3.8/pytime.h:6,
  21. from /usr/include/python3.8/Python.h:85,
  22. from cyfusion.cpp:4:
  23. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  24. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  25. | ^~~~~~~~
  26. cyfusion.cpp:22866:32: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  27. 22866 | __pyx_type_8cyfusion_PyViews.tp_print = 0;
  28. | ^~~~~~~~
  29. In file included from /usr/include/python3.8/object.h:746,
  30. from /usr/include/python3.8/pytime.h:6,
  31. from /usr/include/python3.8/Python.h:85,
  32. from cyfusion.cpp:4:
  33. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  34. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  35. | ^~~~~~~~
  36. cyfusion.cpp:22866:32: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  37. 22866 | __pyx_type_8cyfusion_PyViews.tp_print = 0;
  38. | ^~~~~~~~
  39. In file included from /usr/include/python3.8/object.h:746,
  40. from /usr/include/python3.8/pytime.h:6,
  41. from /usr/include/python3.8/Python.h:85,
  42. from cyfusion.cpp:4:
  43. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  44. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  45. | ^~~~~~~~
  46. cyfusion.cpp:22871:33: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  47. 22871 | __pyx_type_8cyfusion_PyVolume.tp_print = 0;
  48. | ^~~~~~~~
  49. In file included from /usr/include/python3.8/object.h:746,
  50. from /usr/include/python3.8/pytime.h:6,
  51. from /usr/include/python3.8/Python.h:85,
  52. from cyfusion.cpp:4:
  53. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  54. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  55. | ^~~~~~~~
  56. cyfusion.cpp:22871:33: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  57. 22871 | __pyx_type_8cyfusion_PyVolume.tp_print = 0;
  58. | ^~~~~~~~
  59. In file included from /usr/include/python3.8/object.h:746,
  60. from /usr/include/python3.8/pytime.h:6,
  61. from /usr/include/python3.8/Python.h:85,
  62. from cyfusion.cpp:4:
  63. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  64. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  65. | ^~~~~~~~
  66. cyfusion.cpp:22871:33: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  67. 22871 | __pyx_type_8cyfusion_PyVolume.tp_print = 0;
  68. | ^~~~~~~~
  69. In file included from /usr/include/python3.8/object.h:746,
  70. from /usr/include/python3.8/pytime.h:6,
  71. from /usr/include/python3.8/Python.h:85,
  72. from cyfusion.cpp:4:
  73. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  74. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  75. | ^~~~~~~~
  76. cyfusion.cpp:22878:26: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  77. 22878 | __pyx_type___pyx_array.tp_print = 0;
  78. | ^~~~~~~~
  79. In file included from /usr/include/python3.8/object.h:746,
  80. from /usr/include/python3.8/pytime.h:6,
  81. from /usr/include/python3.8/Python.h:85,
  82. from cyfusion.cpp:4:
  83. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  84. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  85. | ^~~~~~~~
  86. cyfusion.cpp:22878:26: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  87. 22878 | __pyx_type___pyx_array.tp_print = 0;
  88. | ^~~~~~~~
  89. In file included from /usr/include/python3.8/object.h:746,
  90. from /usr/include/python3.8/pytime.h:6,
  91. from /usr/include/python3.8/Python.h:85,
  92. from cyfusion.cpp:4:
  93. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  94. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  95. | ^~~~~~~~
  96. cyfusion.cpp:22878:26: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  97. 22878 | __pyx_type___pyx_array.tp_print = 0;
  98. | ^~~~~~~~
  99. In file included from /usr/include/python3.8/object.h:746,
  100. from /usr/include/python3.8/pytime.h:6,
  101. from /usr/include/python3.8/Python.h:85,
  102. from cyfusion.cpp:4:
  103. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  104. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  105. | ^~~~~~~~
  106. cyfusion.cpp:22883:32: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  107. 22883 | __pyx_type___pyx_MemviewEnum.tp_print = 0;
  108. | ^~~~~~~~
  109. In file included from /usr/include/python3.8/object.h:746,
  110. from /usr/include/python3.8/pytime.h:6,
  111. from /usr/include/python3.8/Python.h:85,
  112. from cyfusion.cpp:4:
  113. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  114. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  115. | ^~~~~~~~
  116. cyfusion.cpp:22883:32: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  117. 22883 | __pyx_type___pyx_MemviewEnum.tp_print = 0;
  118. | ^~~~~~~~
  119. In file included from /usr/include/python3.8/object.h:746,
  120. from /usr/include/python3.8/pytime.h:6,
  121. from /usr/include/python3.8/Python.h:85,
  122. from cyfusion.cpp:4:
  123. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  124. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  125. | ^~~~~~~~
  126. cyfusion.cpp:22883:32: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  127. 22883 | __pyx_type___pyx_MemviewEnum.tp_print = 0;
  128. | ^~~~~~~~
  129. In file included from /usr/include/python3.8/object.h:746,
  130. from /usr/include/python3.8/pytime.h:6,
  131. from /usr/include/python3.8/Python.h:85,
  132. from cyfusion.cpp:4:
  133. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  134. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  135. | ^~~~~~~~
  136. cyfusion.cpp:22895:31: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  137. 22895 | __pyx_type___pyx_memoryview.tp_print = 0;
  138. | ^~~~~~~~
  139. In file included from /usr/include/python3.8/object.h:746,
  140. from /usr/include/python3.8/pytime.h:6,
  141. from /usr/include/python3.8/Python.h:85,
  142. from cyfusion.cpp:4:
  143. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  144. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  145. | ^~~~~~~~
  146. cyfusion.cpp:22895:31: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  147. 22895 | __pyx_type___pyx_memoryview.tp_print = 0;
  148. | ^~~~~~~~
  149. In file included from /usr/include/python3.8/object.h:746,
  150. from /usr/include/python3.8/pytime.h:6,
  151. from /usr/include/python3.8/Python.h:85,
  152. from cyfusion.cpp:4:
  153. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  154. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  155. | ^~~~~~~~
  156. cyfusion.cpp:22895:31: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  157. 22895 | __pyx_type___pyx_memoryview.tp_print = 0;
  158. | ^~~~~~~~
  159. In file included from /usr/include/python3.8/object.h:746,
  160. from /usr/include/python3.8/pytime.h:6,
  161. from /usr/include/python3.8/Python.h:85,
  162. from cyfusion.cpp:4:
  163. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  164. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  165. | ^~~~~~~~
  166. cyfusion.cpp:22905:36: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  167. 22905 | __pyx_type___pyx_memoryviewslice.tp_print = 0;
  168. | ^~~~~~~~
  169. In file included from /usr/include/python3.8/object.h:746,
  170. from /usr/include/python3.8/pytime.h:6,
  171. from /usr/include/python3.8/Python.h:85,
  172. from cyfusion.cpp:4:
  173. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  174. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  175. | ^~~~~~~~
  176. cyfusion.cpp:22905:36: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  177. 22905 | __pyx_type___pyx_memoryviewslice.tp_print = 0;
  178. | ^~~~~~~~
  179. In file included from /usr/include/python3.8/object.h:746,
  180. from /usr/include/python3.8/pytime.h:6,
  181. from /usr/include/python3.8/Python.h:85,
  182. from cyfusion.cpp:4:
  183. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  184. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  185. | ^~~~~~~~
  186. cyfusion.cpp:22905:36: warning: ‘_typeobject::tp_print’ is deprecated [-Wdeprecated-declarations]
  187. 22905 | __pyx_type___pyx_memoryviewslice.tp_print = 0;
  188. | ^~~~~~~~
  189. In file included from /usr/include/python3.8/object.h:746,
  190. from /usr/include/python3.8/pytime.h:6,
  191. from /usr/include/python3.8/Python.h:85,
  192. from cyfusion.cpp:4:
  193. /usr/include/python3.8/cpython/object.h:260:30: note: declared here
  194. 260 | Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
  195. | ^~~~~~~~
  196. cyfusion.cpp: In function ‘void __Pyx__ExceptionSave(PyThreadState*, PyObject**, PyObject**, PyObject**)’:
  197. cyfusion.cpp:24028:21: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  198. 24028 | *type = tstate->exc_type;
  199. | ^~~~~~~~
  200. | curexc_type
  201. cyfusion.cpp:24029:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  202. 24029 | *value = tstate->exc_value;
  203. | ^~~~~~~~~
  204. | curexc_value
  205. cyfusion.cpp:24030:19: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  206. 24030 | *tb = tstate->exc_traceback;
  207. | ^~~~~~~~~~~~~
  208. | curexc_traceback
  209. cyfusion.cpp: In function ‘void __Pyx__ExceptionReset(PyThreadState*, PyObject*, PyObject*, PyObject*)’:
  210. cyfusion.cpp:24037:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  211. 24037 | tmp_type = tstate->exc_type;
  212. | ^~~~~~~~
  213. | curexc_type
  214. cyfusion.cpp:24038:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  215. 24038 | tmp_value = tstate->exc_value;
  216. | ^~~~~~~~~
  217. | curexc_value
  218. cyfusion.cpp:24039:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  219. 24039 | tmp_tb = tstate->exc_traceback;
  220. | ^~~~~~~~~~~~~
  221. | curexc_traceback
  222. cyfusion.cpp:24040:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  223. 24040 | tstate->exc_type = type;
  224. | ^~~~~~~~
  225. | curexc_type
  226. cyfusion.cpp:24041:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  227. 24041 | tstate->exc_value = value;
  228. | ^~~~~~~~~
  229. | curexc_value
  230. cyfusion.cpp:24042:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  231. 24042 | tstate->exc_traceback = tb;
  232. | ^~~~~~~~~~~~~
  233. | curexc_traceback
  234. cyfusion.cpp: In function ‘int __Pyx__GetException(PyThreadState*, PyObject**, PyObject**, PyObject**)’:
  235. cyfusion.cpp:24112:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  236. 24112 | tmp_type = tstate->exc_type;
  237. | ^~~~~~~~
  238. | curexc_type
  239. cyfusion.cpp:24113:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  240. 24113 | tmp_value = tstate->exc_value;
  241. | ^~~~~~~~~
  242. | curexc_value
  243. cyfusion.cpp:24114:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  244. 24114 | tmp_tb = tstate->exc_traceback;
  245. | ^~~~~~~~~~~~~
  246. | curexc_traceback
  247. cyfusion.cpp:24115:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  248. 24115 | tstate->exc_type = local_type;
  249. | ^~~~~~~~
  250. | curexc_type
  251. cyfusion.cpp:24116:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  252. 24116 | tstate->exc_value = local_value;
  253. | ^~~~~~~~~
  254. | curexc_value
  255. cyfusion.cpp:24117:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  256. 24117 | tstate->exc_traceback = local_tb;
  257. | ^~~~~~~~~~~~~
  258. | curexc_traceback
  259. cyfusion.cpp: In function ‘void __Pyx__ExceptionSwap(PyThreadState*, PyObject**, PyObject**, PyObject**)’:
  260. cyfusion.cpp:24354:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  261. 24354 | tmp_type = tstate->exc_type;
  262. | ^~~~~~~~
  263. | curexc_type
  264. cyfusion.cpp:24355:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  265. 24355 | tmp_value = tstate->exc_value;
  266. | ^~~~~~~~~
  267. | curexc_value
  268. cyfusion.cpp:24356:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  269. 24356 | tmp_tb = tstate->exc_traceback;
  270. | ^~~~~~~~~~~~~
  271. | curexc_traceback
  272. cyfusion.cpp:24357:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’?
  273. 24357 | tstate->exc_type = *type;
  274. | ^~~~~~~~
  275. | curexc_type
  276. cyfusion.cpp:24358:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’?
  277. 24358 | tstate->exc_value = *value;
  278. | ^~~~~~~~~
  279. | curexc_value
  280. cyfusion.cpp:24359:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
  281. 24359 | tstate->exc_traceback = *tb;
  282. | ^~~~~~~~~~~~~
  283. | curexc_traceback
  284. error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
  285. 19149/31772MB(tsdf)
  286.  
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