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  1. $ ./procheck.scr ../1SW3.pdb 2
  2.  
  3.  
  4. Check of stereochemical quality - PROCHECK v.3.5.4 (Feb 2001)
  5. -------------------------------------------------------------
  6.  
  7. Coordinates file: [ ../1SW3.pdb ]
  8.  
  9. Resolution: 2
  10.  
  11. Program directory: /home/renzo/procheck/procheck
  12.  
  13. Running clean-up on file: ../1SW3.pdb
  14.  
  15. /home/renzo/procheck/procheck/clean: Command not found.
  16.  
  17. .................................................................
  18.  
  19. Secondary structure assignment
  20.  
  21. /home/renzo/procheck/procheck/secstr: Command not found.
  22.  
  23. ..................................................................
  24.  
  25. Non-bonded interactions
  26.  
  27. **** Failed to open specified input file!
  28. * Program completed
  29.  
  30. ..................................................................
  31.  
  32. Calculation of bond lengths and bond angles
  33.  
  34. *** ERROR. Unable to open data file:
  35.  
  36. ..................................................................
  37.  
  38. Phi-psi and chi1-chi2 distributions
  39.  
  40. /home/renzo/procheck/procheck/tplot: Command not found.
  41.  
  42.  
  43. ..................................................................
  44.  
  45. Stereochemical quality plots and residue-by-residue listing
  46.  
  47.  
  48. *** ERROR. Unable to open .rin data file
  49. *
  50.  
  51. ..................................................................
  52.  
  53. Main-chain bond-lengths and angles, and planar groups
  54.  
  55.  
  56.  
  57. ..................................................................
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