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  1. >homolog_cds_gaps
  2. -----------------------------------------------------------------------------------------------------------------GAACCTGCCCAGGCCATCAAGGGTATGCATATCCGAAAAGCCAGCAA-------------------------------------------------------------------AGTAACGCTGAGCTTAAGGGTCTAGATGTAGATTCTCTGGTCATTGAACACATCCAGGTGAACAAAGCACCTAAGATGCGCCGCCGAACTTACAGAGCTCACGGCCGGATTAACCCATACATGAGCCTCCCCCTGCCACATCGAAATGATCCTCAACGGAAAAGGAACAGATTGTTCCAAAGCCAGAAGAGGAGGTTGCACAGAAAGAAAAAGATATCCCAGAAGAAACTGAAGAAACAAAAACTTATGGCACGGGAATAAATTCAGCAATAAAATAAATGCAGAATAAA-----
  3. >>homolog_cds_NOgaps
  4. GAACCTGCCCAGGCCATCAAGGGTATGCATATCCGAAAAGCCAGCAAAGTAACGCTGAGCTTAAGGGTCTAGATGTAGATTCTCTGGTCATTGAACACATCCAGGTGAACAAAGCACCTAAGATGCGCCGCCGAACTTACAGAGCTCACGGCCGGATTAACCCATACATGAGCCTCCCCCTGCCACATCGAAATGATCCTCAACGGAAAAGGAACAGATTGTTCCAAAGCCAGAAGAGGAGGTTGCACAGAAAGAAAAAGATATCCCAGAAGAAACTGAAGAAACAAAAACTTATGGCACGGGAATAA
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