Advertisement
Guest User

Untitled

a guest
Aug 29th, 2012
308
0
Never
Not a member of Pastebin yet? Sign Up, it unlocks many cool features!
text 38.80 KB | None | 0 0
  1. [mgx@cmbcluster testing]$ /shared/openmpi-1.6.1/gcc/bin/mpirun -n 1 /shared/nwchem-6.1.1/bin/nwchem /home/mgx/testing/nwchem.nw
  2. argument 1 = /home/mgx/testing/nwchem.nw
  3. All connections between all procs tested: SUCCESS
  4.  
  5.  
  6.  
  7.  
  8. Northwest Computational Chemistry Package (NWChem) 6.1.1
  9. --------------------------------------------------------
  10.  
  11.  
  12. Environmental Molecular Sciences Laboratory
  13. Pacific Northwest National Laboratory
  14. Richland, WA 99352
  15.  
  16. Copyright (c) 1994-2012
  17. Pacific Northwest National Laboratory
  18. Battelle Memorial Institute
  19.  
  20. NWChem is an open-source computational chemistry package
  21. distributed under the terms of the
  22. Educational Community License (ECL) 2.0
  23. A copy of the license is included with this distribution
  24. in the LICENSE.TXT file
  25.  
  26. ACKNOWLEDGMENT
  27. --------------
  28.  
  29. This software and its documentation were developed at the
  30. EMSL at Pacific Northwest National Laboratory, a multiprogram
  31. national laboratory, operated for the U.S. Department of Energy
  32. by Battelle under Contract Number DE-AC05-76RL01830. Support
  33. for this work was provided by the Department of Energy Office
  34. of Biological and Environmental Research, Office of Basic
  35. Energy Sciences, and the Office of Advanced Scientific Computing.
  36.  
  37.  
  38. Job information
  39. ---------------
  40.  
  41. hostname = cmbcluster
  42. program = /shared/nwchem-6.1.1/bin/nwchem
  43. date = Wed Aug 29 14:10:09 2012
  44.  
  45. compiled = Tue_Aug_28_20:33:19_2012
  46. source = /shared/build/nwchem-6.1.1-src
  47. nwchem branch = 6.1.1
  48. input = /home/mgx/testing/nwchem.nw
  49. prefix = h2o.
  50. data base = ./h2o.db
  51. status = startup
  52. nproc = 1
  53. time left = -1s
  54.  
  55.  
  56.  
  57. Memory information
  58. ------------------
  59.  
  60. heap = 13107201 doubles = 100.0 Mbytes
  61. stack = 13107201 doubles = 100.0 Mbytes
  62. global = 26214400 doubles = 200.0 Mbytes (distinct from heap & stack)
  63. total = 52428802 doubles = 400.0 Mbytes
  64. verify = yes
  65. hardfail = no
  66.  
  67.  
  68. Directory information
  69. ---------------------
  70.  
  71. 0 permanent = .
  72. 0 scratch = .
  73.  
  74.  
  75.  
  76.  
  77. NWChem Input Module
  78. -------------------
  79.  
  80.  
  81. Water geometry optimization in cc-pvdz basis set
  82. ------------------------------------------------
  83.  
  84. Scaling coordinates for geometry "geometry" by 1.889725989
  85. (inverse scale = 0.529177249)
  86.  
  87. C2V symmetry detected
  88.  
  89. ------
  90. auto-z
  91. ------
  92.  
  93.  
  94. Geometry "geometry" -> ""
  95. -------------------------
  96.  
  97. Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
  98.  
  99. No. Tag Charge X Y Z
  100. ---- ---------------- ---------- -------------- -------------- --------------
  101. 1 O 8.0000 0.00000000 0.00000000 0.14800000
  102. 2 H 1.0000 -0.74000000 0.00000000 -0.59200000
  103. 3 H 1.0000 0.74000000 0.00000000 -0.59200000
  104.  
  105. Atomic Mass
  106. -----------
  107.  
  108. O 15.994910
  109. H 1.007825
  110.  
  111.  
  112. Effective nuclear repulsion energy (a.u.) 8.4480348162
  113.  
  114. Nuclear Dipole moment (a.u.)
  115. ----------------------------
  116. X Y Z
  117. ---------------- ---------------- ----------------
  118. 0.0000000000 0.0000000000 0.0000000000
  119.  
  120. Symmetry information
  121. --------------------
  122.  
  123. Group name C2v
  124. Group number 16
  125. Group order 4
  126. No. of unique centers 2
  127.  
  128. Symmetry unique atoms
  129.  
  130. 1 2
  131.  
  132.  
  133.  
  134. Z-matrix (autoz)
  135. --------
  136.  
  137. Units are Angstrom for bonds and degrees for angles
  138.  
  139. Type Name I J K L M Value
  140. ----------- -------- ----- ----- ----- ----- ----- ----------
  141. 1 Stretch 1 2 1.04652
  142. 2 Stretch 1 3 1.04652
  143. 3 Bend 2 1 3 90.00000
  144.  
  145.  
  146. XYZ format geometry
  147. -------------------
  148. 3
  149. geometry
  150. O 0.00000000 0.00000000 0.14800000
  151. H -0.74000000 0.00000000 -0.59200000
  152. H 0.74000000 0.00000000 -0.59200000
  153.  
  154. ==============================================================================
  155. internuclear distances
  156. ------------------------------------------------------------------------------
  157. center one | center two | atomic units | angstroms
  158. ------------------------------------------------------------------------------
  159. 2 H | 1 O | 1.97763 | 1.04652
  160. 3 H | 1 O | 1.97763 | 1.04652
  161. ------------------------------------------------------------------------------
  162. number of included internuclear distances: 2
  163. ==============================================================================
  164.  
  165.  
  166.  
  167. ==============================================================================
  168. internuclear angles
  169. ------------------------------------------------------------------------------
  170. center 1 | center 2 | center 3 | degrees
  171. ------------------------------------------------------------------------------
  172. 2 H | 1 O | 3 H | 90.00
  173. ------------------------------------------------------------------------------
  174. number of included internuclear angles: 1
  175. ==============================================================================
  176.  
  177.  
  178.  
  179. library name resolved from: .nwchemrc
  180. library file name is: </shared/nwchem-6.1.1/data/libraries/>
  181.  
  182. Basis "ao basis" -> "" (cartesian)
  183. -----
  184. H (Hydrogen)
  185. ------------
  186. Exponent Coefficients
  187. -------------- ---------------------------------------------------------
  188. 1 S 1.30100000E+01 0.019685
  189. 1 S 1.96200000E+00 0.137977
  190. 1 S 4.44600000E-01 0.478148
  191.  
  192. 2 S 1.22000000E-01 1.000000
  193.  
  194. 3 P 7.27000000E-01 1.000000
  195.  
  196. O (Oxygen)
  197. ----------
  198. Exponent Coefficients
  199. -------------- ---------------------------------------------------------
  200. 1 S 1.17200000E+04 0.000710
  201. 1 S 1.75900000E+03 0.005470
  202. 1 S 4.00800000E+02 0.027837
  203. 1 S 1.13700000E+02 0.104800
  204. 1 S 3.70300000E+01 0.283062
  205. 1 S 1.32700000E+01 0.448719
  206. 1 S 5.02500000E+00 0.270952
  207. 1 S 1.01300000E+00 0.015458
  208.  
  209. 2 S 1.17200000E+04 -0.000160
  210. 2 S 1.75900000E+03 -0.001263
  211. 2 S 4.00800000E+02 -0.006267
  212. 2 S 1.13700000E+02 -0.025716
  213. 2 S 3.70300000E+01 -0.070924
  214. 2 S 1.32700000E+01 -0.165411
  215. 2 S 5.02500000E+00 -0.116955
  216. 2 S 1.01300000E+00 0.557368
  217.  
  218. 3 S 3.02300000E-01 1.000000
  219.  
  220. 4 P 1.77000000E+01 0.043018
  221. 4 P 3.85400000E+00 0.228913
  222. 4 P 1.04600000E+00 0.508728
  223.  
  224. 5 P 2.75300000E-01 1.000000
  225.  
  226. 6 D 1.18500000E+00 1.000000
  227.  
  228.  
  229.  
  230. Summary of "ao basis" -> "" (cartesian)
  231. ------------------------------------------------------------------------------
  232. Tag Description Shells Functions and Types
  233. ---------------- ------------------------------ ------ ---------------------
  234. H cc-pvdz 3 5 2s1p
  235. O cc-pvdz 6 15 3s2p1d
  236.  
  237.  
  238.  
  239. Deleted DRIVER restart files
  240.  
  241.  
  242.  
  243. NWChem Geometry Optimization
  244. ----------------------------
  245.  
  246.  
  247.  
  248.  
  249. Water geometry optimization in cc-pvdz basis set
  250.  
  251.  
  252. maximum gradient threshold (gmax) = 0.000450
  253. rms gradient threshold (grms) = 0.000300
  254. maximum cartesian step threshold (xmax) = 0.001800
  255. rms cartesian step threshold (xrms) = 0.001200
  256. fixed trust radius (trust) = 0.300000
  257. maximum step size to saddle (sadstp) = 0.100000
  258. energy precision (eprec) = 1.0D-07
  259. maximum number of steps (nptopt) = 20
  260. initial hessian option (inhess) = 0
  261. line search option (linopt) = 1
  262. hessian update option (modupd) = 1
  263. saddle point option (modsad) = 0
  264. initial eigen-mode to follow (moddir) = 0
  265. initial variable to follow (vardir) = 0
  266. follow first negative mode (firstneg) = T
  267. apply conjugacy (opcg) = F
  268. source of zmatrix = autoz
  269.  
  270.  
  271. -------------------
  272. Energy Minimization
  273. -------------------
  274.  
  275.  
  276. Names of Z-matrix variables
  277. 1 2 3
  278.  
  279. Variables with the same non-blank name are constrained to be equal
  280.  
  281.  
  282. Using diagonal initial Hessian
  283. Scaling for Hessian diagonals: bonds = 1.00 angles = 0.25 torsions = 0.10
  284.  
  285. --------
  286. Step 0
  287. --------
  288.  
  289.  
  290. Geometry "geometry" -> "geometry"
  291. ---------------------------------
  292.  
  293. Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
  294.  
  295. No. Tag Charge X Y Z
  296. ---- ---------------- ---------- -------------- -------------- --------------
  297. 1 O 8.0000 0.00000000 0.00000000 0.14800000
  298. 2 H 1.0000 -0.74000000 0.00000000 -0.59200000
  299. 3 H 1.0000 0.74000000 0.00000000 -0.59200000
  300.  
  301. Atomic Mass
  302. -----------
  303.  
  304. O 15.994910
  305. H 1.007825
  306.  
  307.  
  308. Effective nuclear repulsion energy (a.u.) 8.4480348162
  309.  
  310. Nuclear Dipole moment (a.u.)
  311. ----------------------------
  312. X Y Z
  313. ---------------- ---------------- ----------------
  314. 0.0000000000 0.0000000000 0.0000000000
  315.  
  316. Symmetry information
  317. --------------------
  318.  
  319. Group name C2v
  320. Group number 16
  321. Group order 4
  322. No. of unique centers 2
  323.  
  324. Symmetry unique atoms
  325.  
  326. 1 2
  327.  
  328. NWChem SCF Module
  329. -----------------
  330.  
  331.  
  332. Water geometry optimization in cc-pvdz basis set
  333.  
  334.  
  335.  
  336. ao basis = "ao basis"
  337. functions = 25
  338. atoms = 3
  339. closed shells = 5
  340. open shells = 0
  341. charge = 0.00
  342. wavefunction = RHF
  343. input vectors = atomic
  344. output vectors = ./h2o.movecs
  345. use symmetry = T
  346. symmetry adapt = T
  347.  
  348.  
  349. Forming initial guess at 0.0s
  350.  
  351.  
  352. Starting SCF solution at 0.1s
  353.  
  354.  
  355.  
  356. Final RHF results
  357. ------------------
  358.  
  359. Total SCF energy = -76.006436831771
  360. One-electron energy = -121.738890941732
  361. Two-electron energy = 37.284419293776
  362. Nuclear repulsion energy = 8.448034816185
  363.  
  364. Time for solution = 0.1s
  365.  
  366.  
  367. NWChem Gradients Module
  368. -----------------------
  369.  
  370.  
  371.  
  372. RHF ENERGY GRADIENTS
  373.  
  374. atom coordinates gradient
  375. x y z x y z
  376. 1 O 0.000000 0.000000 0.279679 0.000000 0.000000 0.134854
  377. 2 H -1.398397 0.000000 -1.118718 -0.041296 0.000000 -0.067427
  378. 3 H 1.398397 0.000000 -1.118718 0.041296 0.000000 -0.067427
  379.  
  380.  
  381. @ Step Energy Delta E Gmax Grms Xrms Xmax Walltime
  382. @ ---- ---------------- -------- -------- -------- -------- -------- --------
  383. @ 0 -76.00643683 0.0D+00 0.07688 0.06376 0.00000 0.00000 0.4
  384.  
  385.  
  386.  
  387.  
  388. Z-matrix (autoz)
  389. --------
  390.  
  391. Units are Angstrom for bonds and degrees for angles
  392.  
  393. Type Name I J K L M Value Gradient
  394. ----------- -------- ----- ----- ----- ----- ----- ---------- ----------
  395. 1 Stretch 1 2 1.04652 0.07688
  396. 2 Stretch 1 3 1.04652 0.07688
  397. 3 Bend 2 1 3 90.00000 -0.01934
  398.  
  399. Restricting large step in mode 1 eval= 4.7D-02 step= 4.1D-01 new= 3.0D-01
  400. Restricting overall step due to large component. alpha= 1.00
  401. NWChem SCF Module
  402. -----------------
  403.  
  404.  
  405. Water geometry optimization in cc-pvdz basis set
  406.  
  407.  
  408.  
  409. ao basis = "ao basis"
  410. functions = 25
  411. atoms = 3
  412. closed shells = 5
  413. open shells = 0
  414. charge = 0.00
  415. wavefunction = RHF
  416. input vectors = ./h2o.movecs
  417. output vectors = ./h2o.movecs
  418. use symmetry = T
  419. symmetry adapt = T
  420.  
  421.  
  422. Forming initial guess at 0.4s
  423.  
  424.  
  425. Starting SCF solution at 0.4s
  426.  
  427.  
  428.  
  429. Final RHF results
  430. ------------------
  431.  
  432. Total SCF energy = -76.023471784325
  433. One-electron energy = -123.938749902886
  434. Two-electron energy = 38.259196284367
  435. Nuclear repulsion energy = 9.656081834194
  436.  
  437. Time for solution = 0.1s
  438.  
  439.  
  440. Line search:
  441. step= 1.00 grad=-4.5D-02 hess= 2.8D-02 energy= -76.023472 mode=downhill
  442. new step= 0.81 predicted energy= -76.024484
  443.  
  444. --------
  445. Step 1
  446. --------
  447.  
  448.  
  449. Geometry "geometry" -> "geometry"
  450. ---------------------------------
  451.  
  452. Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
  453.  
  454. No. Tag Charge X Y Z
  455. ---- ---------------- ---------- -------------- -------------- --------------
  456. 1 O 8.0000 0.00000000 0.00000000 0.06776821
  457. 2 H 1.0000 -0.70477029 0.00000000 -0.55188410
  458. 3 H 1.0000 0.70477029 0.00000000 -0.55188410
  459.  
  460. Atomic Mass
  461. -----------
  462.  
  463. O 15.994910
  464. H 1.007825
  465.  
  466.  
  467. Effective nuclear repulsion energy (a.u.) 9.3976680568
  468.  
  469. Nuclear Dipole moment (a.u.)
  470. ----------------------------
  471. X Y Z
  472. ---------------- ---------------- ----------------
  473. 0.0000000000 0.0000000000 -1.0613126930
  474.  
  475. Symmetry information
  476. --------------------
  477.  
  478. Group name C2v
  479. Group number 16
  480. Group order 4
  481. No. of unique centers 2
  482.  
  483. Symmetry unique atoms
  484.  
  485. 1 2
  486.  
  487. NWChem SCF Module
  488. -----------------
  489.  
  490.  
  491. Water geometry optimization in cc-pvdz basis set
  492.  
  493.  
  494.  
  495. ao basis = "ao basis"
  496. functions = 25
  497. atoms = 3
  498. closed shells = 5
  499. open shells = 0
  500. charge = 0.00
  501. wavefunction = RHF
  502. input vectors = ./h2o.movecs
  503. output vectors = ./h2o.movecs
  504. use symmetry = T
  505. symmetry adapt = T
  506.  
  507.  
  508. Forming initial guess at 0.5s
  509.  
  510.  
  511. Starting SCF solution at 0.5s
  512.  
  513.  
  514.  
  515. Final RHF results
  516. ------------------
  517.  
  518. Total SCF energy = -76.025659782246
  519. One-electron energy = -123.481331516485
  520. Two-electron energy = 38.058003677435
  521. Nuclear repulsion energy = 9.397668056804
  522.  
  523. Time for solution = 0.1s
  524.  
  525.  
  526. NWChem Gradients Module
  527. -----------------------
  528.  
  529.  
  530.  
  531. RHF ENERGY GRADIENTS
  532.  
  533. atom coordinates gradient
  534. x y z x y z
  535. 1 O 0.000000 0.000000 0.128063 0.000000 0.000000 0.003013
  536. 2 H -1.331823 0.000000 -1.042910 0.019634 0.000000 -0.001507
  537. 3 H 1.331823 0.000000 -1.042910 -0.019634 -0.000000 -0.001507
  538.  
  539.  
  540. Step Energy Delta E Gmax Grms Xrms Xmax Walltime
  541. ---- ---------------- -------- -------- -------- -------- -------- --------
  542. @ 1 -76.02565978 -1.9D-02 0.01375 0.01358 0.07094 0.14451 0.7
  543.  
  544.  
  545.  
  546.  
  547. Z-matrix (autoz)
  548. --------
  549.  
  550. Units are Angstrom for bonds and degrees for angles
  551.  
  552. Type Name I J K L M Value Gradient
  553. ----------- -------- ----- ----- ----- ----- ----- ---------- ----------
  554. 1 Stretch 1 2 0.93844 -0.01375
  555. 2 Stretch 1 3 0.93844 -0.01375
  556. 3 Bend 2 1 3 97.35445 -0.01323
  557.  
  558. NWChem SCF Module
  559. -----------------
  560.  
  561.  
  562. Water geometry optimization in cc-pvdz basis set
  563.  
  564.  
  565.  
  566. ao basis = "ao basis"
  567. functions = 25
  568. atoms = 3
  569. closed shells = 5
  570. open shells = 0
  571. charge = 0.00
  572. wavefunction = RHF
  573. input vectors = ./h2o.movecs
  574. output vectors = ./h2o.movecs
  575. use symmetry = T
  576. symmetry adapt = T
  577.  
  578.  
  579. Forming initial guess at 0.7s
  580.  
  581.  
  582. Starting SCF solution at 0.7s
  583.  
  584.  
  585.  
  586. Final RHF results
  587. ------------------
  588.  
  589. Total SCF energy = -76.027246824851
  590. One-electron energy = -123.255911966368
  591. Two-electron energy = 37.975113702580
  592. Nuclear repulsion energy = 9.253551438937
  593.  
  594. Time for solution = 0.1s
  595.  
  596.  
  597. Line search:
  598. step= 1.00 grad=-4.5D-03 hess= 2.9D-03 energy= -76.027247 mode=downhill
  599. new step= 0.77 predicted energy= -76.027403
  600.  
  601. --------
  602. Step 2
  603. --------
  604.  
  605.  
  606. Geometry "geometry" -> "geometry"
  607. ---------------------------------
  608.  
  609. Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
  610.  
  611. No. Tag Charge X Y Z
  612. ---- ---------------- ---------- -------------- -------------- --------------
  613. 1 O 8.0000 0.00000000 0.00000000 0.04275664
  614. 2 H 1.0000 -0.74807268 0.00000000 -0.53937832
  615. 3 H 1.0000 0.74807268 0.00000000 -0.53937832
  616.  
  617. Atomic Mass
  618. -----------
  619.  
  620. O 15.994910
  621. H 1.007825
  622.  
  623.  
  624. Effective nuclear repulsion energy (a.u.) 9.2859997431
  625.  
  626. Nuclear Dipole moment (a.u.)
  627. ----------------------------
  628. X Y Z
  629. ---------------- ---------------- ----------------
  630. 0.0000000000 0.0000000000 -1.3921677543
  631.  
  632. Symmetry information
  633. --------------------
  634.  
  635. Group name C2v
  636. Group number 16
  637. Group order 4
  638. No. of unique centers 2
  639.  
  640. Symmetry unique atoms
  641.  
  642. 1 2
  643.  
  644. NWChem SCF Module
  645. -----------------
  646.  
  647.  
  648. Water geometry optimization in cc-pvdz basis set
  649.  
  650.  
  651.  
  652. ao basis = "ao basis"
  653. functions = 25
  654. atoms = 3
  655. closed shells = 5
  656. open shells = 0
  657. charge = 0.00
  658. wavefunction = RHF
  659. input vectors = ./h2o.movecs
  660. output vectors = ./h2o.movecs
  661. use symmetry = T
  662. symmetry adapt = T
  663.  
  664.  
  665. Forming initial guess at 0.8s
  666.  
  667.  
  668. Starting SCF solution at 0.8s
  669.  
  670.  
  671.  
  672. Final RHF results
  673. ------------------
  674.  
  675. Total SCF energy = -76.027383294340
  676. One-electron energy = -123.306879770528
  677. Two-electron energy = 37.993496733043
  678. Nuclear repulsion energy = 9.285999743145
  679.  
  680. Time for solution = 0.1s
  681.  
  682.  
  683. NWChem Gradients Module
  684. -----------------------
  685.  
  686.  
  687.  
  688. RHF ENERGY GRADIENTS
  689.  
  690. atom coordinates gradient
  691. x y z x y z
  692. 1 O 0.000000 0.000000 0.080798 0.000000 0.000000 0.002498
  693. 2 H -1.413652 0.000000 -1.019277 -0.000988 0.000000 -0.001249
  694. 3 H 1.413652 0.000000 -1.019277 0.000988 0.000000 -0.001249
  695.  
  696.  
  697. Step Energy Delta E Gmax Grms Xrms Xmax Walltime
  698. ---- ---------------- -------- -------- -------- -------- -------- --------
  699. @ 2 -76.02738329 -1.7D-03 0.00155 0.00128 0.04247 0.07887 1.1
  700.  
  701.  
  702.  
  703.  
  704. Z-matrix (autoz)
  705. --------
  706.  
  707. Units are Angstrom for bonds and degrees for angles
  708.  
  709. Type Name I J K L M Value Gradient
  710. ----------- -------- ----- ----- ----- ----- ----- ---------- ----------
  711. 1 Stretch 1 2 0.94789 0.00155
  712. 2 Stretch 1 3 0.94789 0.00155
  713. 3 Bend 2 1 3 104.22134 -0.00036
  714.  
  715. NWChem SCF Module
  716. -----------------
  717.  
  718.  
  719. Water geometry optimization in cc-pvdz basis set
  720.  
  721.  
  722.  
  723. ao basis = "ao basis"
  724. functions = 25
  725. atoms = 3
  726. closed shells = 5
  727. open shells = 0
  728. charge = 0.00
  729. wavefunction = RHF
  730. input vectors = ./h2o.movecs
  731. output vectors = ./h2o.movecs
  732. use symmetry = T
  733. symmetry adapt = T
  734.  
  735.  
  736. Forming initial guess at 1.1s
  737.  
  738.  
  739. Starting SCF solution at 1.1s
  740.  
  741.  
  742.  
  743. Final RHF results
  744. ------------------
  745.  
  746. Total SCF energy = -76.027388616633
  747. One-electron energy = -123.339707941893
  748. Two-electron energy = 38.008297693665
  749. Nuclear repulsion energy = 9.304021631594
  750.  
  751. Time for solution = 0.1s
  752.  
  753.  
  754. Line search:
  755. step= 1.00 grad=-1.5D-05 hess= 9.7D-06 energy= -76.027389 mode=downhill
  756. new step= 0.77 predicted energy= -76.027389
  757.  
  758. --------
  759. Step 3
  760. --------
  761.  
  762.  
  763. Geometry "geometry" -> "geometry"
  764. ---------------------------------
  765.  
  766. Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
  767.  
  768. No. Tag Charge X Y Z
  769. ---- ---------------- ---------- -------------- -------------- --------------
  770. 1 O 8.0000 0.00000000 0.00000000 0.04106345
  771. 2 H 1.0000 -0.74816711 0.00000000 -0.53853173
  772. 3 H 1.0000 0.74816711 0.00000000 -0.53853173
  773.  
  774. Atomic Mass
  775. -----------
  776.  
  777. O 15.994910
  778. H 1.007825
  779.  
  780.  
  781. Effective nuclear repulsion energy (a.u.) 9.2999519315
  782.  
  783. Nuclear Dipole moment (a.u.)
  784. ----------------------------
  785. X Y Z
  786. ---------------- ---------------- ----------------
  787. 0.0000000000 0.0000000000 -1.4145654034
  788.  
  789. Symmetry information
  790. --------------------
  791.  
  792. Group name C2v
  793. Group number 16
  794. Group order 4
  795. No. of unique centers 2
  796.  
  797. Symmetry unique atoms
  798.  
  799. 1 2
  800.  
  801. NWChem SCF Module
  802. -----------------
  803.  
  804.  
  805. Water geometry optimization in cc-pvdz basis set
  806.  
  807.  
  808.  
  809. ao basis = "ao basis"
  810. functions = 25
  811. atoms = 3
  812. closed shells = 5
  813. open shells = 0
  814. charge = 0.00
  815. wavefunction = RHF
  816. input vectors = ./h2o.movecs
  817. output vectors = ./h2o.movecs
  818. use symmetry = T
  819. symmetry adapt = T
  820.  
  821.  
  822. Forming initial guess at 1.2s
  823.  
  824.  
  825. Starting SCF solution at 1.2s
  826.  
  827.  
  828.  
  829. Final RHF results
  830. ------------------
  831.  
  832. Total SCF energy = -76.027389113283
  833. One-electron energy = -123.332303135465
  834. Two-electron energy = 38.004962090711
  835. Nuclear repulsion energy = 9.299951931470
  836.  
  837. Time for solution = 0.1s
  838.  
  839.  
  840. NWChem Gradients Module
  841. -----------------------
  842.  
  843.  
  844.  
  845. RHF ENERGY GRADIENTS
  846.  
  847. atom coordinates gradient
  848. x y z x y z
  849. 1 O 0.000000 0.000000 0.077599 0.000000 0.000000 -0.000005
  850. 2 H -1.413831 0.000000 -1.017677 0.000056 0.000000 0.000003
  851. 3 H 1.413831 0.000000 -1.017677 -0.000056 0.000000 0.000003
  852.  
  853.  
  854. Step Energy Delta E Gmax Grms Xrms Xmax Walltime
  855. ---- ---------------- -------- -------- -------- -------- -------- --------
  856. @ 3 -76.02738911 -5.8D-06 0.00005 0.00004 0.00131 0.00320 1.4
  857. ok ok
  858.  
  859.  
  860.  
  861. Z-matrix (autoz)
  862. --------
  863.  
  864. Units are Angstrom for bonds and degrees for angles
  865.  
  866. Type Name I J K L M Value Gradient
  867. ----------- -------- ----- ----- ----- ----- ----- ---------- ----------
  868. 1 Stretch 1 2 0.94641 -0.00005
  869. 2 Stretch 1 3 0.94641 -0.00005
  870. 3 Bend 2 1 3 104.47106 -0.00003
  871.  
  872. NWChem SCF Module
  873. -----------------
  874.  
  875.  
  876. Water geometry optimization in cc-pvdz basis set
  877.  
  878.  
  879.  
  880. ao basis = "ao basis"
  881. functions = 25
  882. atoms = 3
  883. closed shells = 5
  884. open shells = 0
  885. charge = 0.00
  886. wavefunction = RHF
  887. input vectors = ./h2o.movecs
  888. output vectors = ./h2o.movecs
  889. use symmetry = T
  890. symmetry adapt = T
  891.  
  892.  
  893. Forming initial guess at 1.5s
  894.  
  895.  
  896. Starting SCF solution at 1.5s
  897.  
  898.  
  899.  
  900. Final RHF results
  901. ------------------
  902.  
  903. Total SCF energy = -76.027389124500
  904. One-electron energy = -123.331772635845
  905. Two-electron energy = 38.004762948344
  906. Nuclear repulsion energy = 9.299620563000
  907.  
  908. Time for solution = 0.1s
  909.  
  910.  
  911. Line search:
  912. step= 1.00 grad=-2.1D-08 hess= 1.0D-08 energy= -76.027389 mode=accept
  913. new step= 1.00 predicted energy= -76.027389
  914.  
  915. --------
  916. Step 4
  917. --------
  918.  
  919.  
  920. Geometry "geometry" -> "geometry"
  921. ---------------------------------
  922.  
  923. Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
  924.  
  925. No. Tag Charge X Y Z
  926. ---- ---------------- ---------- -------------- -------------- --------------
  927. 1 O 8.0000 0.00000000 0.00000000 0.04100576
  928. 2 H 1.0000 -0.74827186 0.00000000 -0.53850288
  929. 3 H 1.0000 0.74827186 0.00000000 -0.53850288
  930.  
  931. Atomic Mass
  932. -----------
  933.  
  934. O 15.994910
  935. H 1.007825
  936.  
  937.  
  938. Effective nuclear repulsion energy (a.u.) 9.2996205630
  939.  
  940. Nuclear Dipole moment (a.u.)
  941. ----------------------------
  942. X Y Z
  943. ---------------- ---------------- ----------------
  944. 0.0000000000 0.0000000000 -1.4153285923
  945.  
  946. Symmetry information
  947. --------------------
  948.  
  949. Group name C2v
  950. Group number 16
  951. Group order 4
  952. No. of unique centers 2
  953.  
  954. Symmetry unique atoms
  955.  
  956. 1 2
  957.  
  958. NWChem SCF Module
  959. -----------------
  960.  
  961.  
  962. Water geometry optimization in cc-pvdz basis set
  963.  
  964.  
  965.  
  966. ao basis = "ao basis"
  967. functions = 25
  968. atoms = 3
  969. closed shells = 5
  970. open shells = 0
  971. charge = 0.00
  972. wavefunction = RHF
  973. input vectors = ./h2o.movecs
  974. output vectors = ./h2o.movecs
  975. use symmetry = T
  976. symmetry adapt = T
  977.  
  978.  
  979. The SCF is already converged
  980.  
  981. Total SCF energy = -76.027389124500
  982.  
  983. NWChem Gradients Module
  984. -----------------------
  985.  
  986.  
  987.  
  988. RHF ENERGY GRADIENTS
  989.  
  990. atom coordinates gradient
  991. x y z x y z
  992. 1 O 0.000000 0.000000 0.077490 0.000000 0.000000 -0.000001
  993. 2 H -1.414029 0.000000 -1.017623 0.000003 0.000000 0.000000
  994. 3 H 1.414029 0.000000 -1.017623 -0.000003 0.000000 0.000000
  995.  
  996.  
  997. Step Energy Delta E Gmax Grms Xrms Xmax Walltime
  998. ---- ---------------- -------- -------- -------- -------- -------- --------
  999. @ 4 -76.02738912 -1.1D-08 0.00000 0.00000 0.00010 0.00020 1.7
  1000. ok ok ok ok
  1001.  
  1002.  
  1003.  
  1004. Z-matrix (autoz)
  1005. --------
  1006.  
  1007. Units are Angstrom for bonds and degrees for angles
  1008.  
  1009. Type Name I J K L M Value Gradient
  1010. ----------- -------- ----- ----- ----- ----- ----- ---------- ----------
  1011. 1 Stretch 1 2 0.94644 -0.00000
  1012. 2 Stretch 1 3 0.94644 -0.00000
  1013. 3 Bend 2 1 3 104.48711 -0.00000
  1014.  
  1015.  
  1016. ----------------------
  1017. Optimization converged
  1018. ----------------------
  1019.  
  1020.  
  1021. Step Energy Delta E Gmax Grms Xrms Xmax Walltime
  1022. ---- ---------------- -------- -------- -------- -------- -------- --------
  1023. @ 4 -76.02738912 -1.1D-08 0.00000 0.00000 0.00010 0.00020 1.7
  1024. ok ok ok ok
  1025.  
  1026.  
  1027.  
  1028. Z-matrix (autoz)
  1029. --------
  1030.  
  1031. Units are Angstrom for bonds and degrees for angles
  1032.  
  1033. Type Name I J K L M Value Gradient
  1034. ----------- -------- ----- ----- ----- ----- ----- ---------- ----------
  1035. 1 Stretch 1 2 0.94644 -0.00000
  1036. 2 Stretch 1 3 0.94644 -0.00000
  1037. 3 Bend 2 1 3 104.48711 -0.00000
  1038.  
  1039.  
  1040.  
  1041. Geometry "geometry" -> "geometry"
  1042. ---------------------------------
  1043.  
  1044. Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
  1045.  
  1046. No. Tag Charge X Y Z
  1047. ---- ---------------- ---------- -------------- -------------- --------------
  1048. 1 O 8.0000 0.00000000 0.00000000 0.04100576
  1049. 2 H 1.0000 -0.74827186 0.00000000 -0.53850288
  1050. 3 H 1.0000 0.74827186 0.00000000 -0.53850288
  1051.  
  1052. Atomic Mass
  1053. -----------
  1054.  
  1055. O 15.994910
  1056. H 1.007825
  1057.  
  1058.  
  1059. Effective nuclear repulsion energy (a.u.) 9.2996205630
  1060.  
  1061. Nuclear Dipole moment (a.u.)
  1062. ----------------------------
  1063. X Y Z
  1064. ---------------- ---------------- ----------------
  1065. 0.0000000000 0.0000000000 -1.4153285923
  1066.  
  1067. Symmetry information
  1068. --------------------
  1069.  
  1070. Group name C2v
  1071. Group number 16
  1072. Group order 4
  1073. No. of unique centers 2
  1074.  
  1075. Symmetry unique atoms
  1076.  
  1077. 1 2
  1078.  
  1079.  
  1080. Final and change from initial internal coordinates
  1081. --------------------------------------------------
  1082.  
  1083.  
  1084.  
  1085. Z-matrix (autoz)
  1086. --------
  1087.  
  1088. Units are Angstrom for bonds and degrees for angles
  1089.  
  1090. Type Name I J K L M Value Change
  1091. ----------- -------- ----- ----- ----- ----- ----- ---------- ----------
  1092. 1 Stretch 1 2 0.94644 -0.10008
  1093. 2 Stretch 1 3 0.94644 -0.10008
  1094. 3 Bend 2 1 3 104.48711 14.48711
  1095.  
  1096. ==============================================================================
  1097. internuclear distances
  1098. ------------------------------------------------------------------------------
  1099. center one | center two | atomic units | angstroms
  1100. ------------------------------------------------------------------------------
  1101. 2 H | 1 O | 1.78850 | 0.94644
  1102. 3 H | 1 O | 1.78850 | 0.94644
  1103. ------------------------------------------------------------------------------
  1104. number of included internuclear distances: 2
  1105. ==============================================================================
  1106.  
  1107.  
  1108.  
  1109. ==============================================================================
  1110. internuclear angles
  1111. ------------------------------------------------------------------------------
  1112. center 1 | center 2 | center 3 | degrees
  1113. ------------------------------------------------------------------------------
  1114. 2 H | 1 O | 3 H | 104.49
  1115. ------------------------------------------------------------------------------
  1116. number of included internuclear angles: 1
  1117. ==============================================================================
  1118.  
  1119.  
  1120.  
  1121.  
  1122. Task times cpu: 1.5s wall: 1.7s
  1123.  
  1124.  
  1125. NWChem Input Module
  1126. -------------------
  1127.  
  1128.  
  1129. Summary of allocated global arrays
  1130. -----------------------------------
  1131. No active global arrays
  1132.  
  1133.  
  1134.  
  1135. GA Statistics for process 0
  1136. ------------------------------
  1137.  
  1138. create destroy get put acc scatter gather read&inc
  1139. calls: 1625 1625 3.42e+04 6411 8662 0 0 0
  1140. number of processes/call 1.00e+00 1.00e+00 1.00e+00 0.00e+00 0.00e+00
  1141. bytes total: 1.08e+07 5.29e+06 3.85e+06 0.00e+00 0.00e+00 0.00e+00
  1142. bytes remote: 0.00e+00 0.00e+00 0.00e+00 0.00e+00 0.00e+00 0.00e+00
  1143. Max memory consumed for GA by this process: 64200 bytes
  1144.  
  1145. MA_summarize_allocated_blocks: starting scan ...
  1146. MA_summarize_allocated_blocks: scan completed: 0 heap blocks, 0 stack blocks
  1147. MA usage statistics:
  1148.  
  1149. allocation statistics:
  1150. heap stack
  1151. ---- -----
  1152. current number of blocks 0 0
  1153. maximum number of blocks 20 29
  1154. current total bytes 0 0
  1155. maximum total bytes 1061440 22509480
  1156. maximum total K-bytes 1062 22510
  1157. maximum total M-bytes 2 23
  1158.  
  1159.  
  1160. CITATION
  1161. --------
  1162. Please cite the following reference when publishing
  1163. results obtained with NWChem:
  1164.  
  1165. M. Valiev, E.J. Bylaska, N. Govind, K. Kowalski,
  1166. T.P. Straatsma, H.J.J. van Dam, D. Wang, J. Nieplocha,
  1167. E. Apra, T.L. Windus, W.A. de Jong
  1168. "NWChem: a comprehensive and scalable open-source
  1169. solution for large scale molecular simulations"
  1170. Comput. Phys. Commun. 181, 1477 (2010)
  1171. doi:10.1016/j.cpc.2010.04.018
  1172.  
  1173. AUTHORS & CONTRIBUTORS
  1174. ----------------------
  1175. E. J. Bylaska, W. A. de Jong, N. Govind, K. Kowalski, T. P. Straatsma,
  1176. M. Valiev, H. J. J. van Dam, D. Wang, E. Apra, T. L. Windus, J. Hammond,
  1177. J. Autschbach, F. Aquino, J. Mullin, P. Nichols, S. Hirata, M. T. Hackler,
  1178. Y. Zhao, P.-D. Fan, R. J. Harrison, M. Dupuis, D. M. A. Smith, K. Glaesemann,
  1179. J. Nieplocha, V. Tipparaju, M. Krishnan, A. Vazquez-Mayagoitia, L. Jensen,
  1180. M. Swart, Q. Wu, T. Van Voorhis, A. A. Auer, M. Nooijen, L. D. Crosby,
  1181. E. Brown, G. Cisneros, G. I. Fann, H. Fruchtl, J. Garza, K. Hirao,
  1182. R. Kendall, J. A. Nichols, K. Tsemekhman, K. Wolinski, J. Anchell,
  1183. D. Bernholdt, P. Borowski, T. Clark, D. Clerc, H. Dachsel, M. Deegan,
  1184. K. Dyall, D. Elwood, E. Glendening, M. Gutowski, A. Hess, J. Jaffe,
  1185. B. Johnson, J. Ju, R. Kobayashi, R. Kutteh, Z. Lin, R. Littlefield,
  1186. X. Long, B. Meng, T. Nakajima, S. Niu, L. Pollack, M. Rosing, G. Sandrone,
  1187. M. Stave, H. Taylor, G. Thomas, J. H. van Lenthe, A. Wong, Z. Zhang.
  1188.  
  1189. Total times cpu: 1.5s wall: 1.7s
Advertisement
Add Comment
Please, Sign In to add comment
Advertisement