Solution: Install ntfs-3g with sudo apt-get install ntfs-3g. Then run the ntfsfix command on your NTFS partition.

ntfsfix v2.0.0 (libntfs 10:0:0)

Usage: ntfsfix [options] device

Attempt to fix an NTFS partition.

-h, --help             Display this help
-V, --version          Display version information
For example: ntfsfix /dev/hda6