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gpuR windows install errors

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Jul 6th, 2016
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  1. install.packages("~/cdeterman-gpuR-58b6d07.tar", type = "SOURCE", repos = NULL)
  2. Installing package into ‘C:/Users/me/Documents/R/win-library/3.2’
  3. (as ‘lib’ is unspecified)
  4. * installing *source* package 'gpuR' ...
  5. g++ version =
  6. using CUDA_PATH
  7. ** libs
  8. Warning: this package has a non-empty 'configure.win' file,
  9. so building only the main architecture
  10.  
  11. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
  12. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c context.cpp -o context.o
  13. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c device.cpp -o device.o
  14. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c dynEigenMat.cpp -o dynEigenMat.o
  15. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c dynEigenVec.cpp -o dynEigenVec.o
  16. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c dynVCLMat.cpp -o dynVCLMat.o
  17. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c dynVCLVec.cpp -o dynVCLVec.o
  18. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c gpuEigenPtr.cpp -o gpuEigenPtr.o
  19. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c gpuMatrix_iaxpy.cpp -o gpuMatrix_iaxpy.o
  20. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c gpuMatrix_igemm.cpp -o gpuMatrix_igemm.o
  21. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c gpuVector_iaxpy.cpp -o gpuVector_iaxpy.o
  22. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c gpu_vector_algebra.cpp -o gpu_vector_algebra.o
  23. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c platform.cpp -o platform.o
  24. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c trunc_gpuMat.cpp -o trunc_gpuMat.o
  25. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c utils-vcl.cpp -o utils-vcl.o
  26. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c utils.cpp -o utils.o
  27. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c vclPtr.cpp -o vclPtr.o
  28. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c vienna_blas1.cpp -o vienna_blas1.o
  29. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c vienna_blas3.cpp -o vienna_blas3.o
  30. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c vienna_eigen.cpp -o vienna_eigen.o
  31. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c vienna_qr.cpp -o vienna_qr.o
  32. g++ -m64 -std=c++0x -I"C:/PROGRA~1/R/R-32~1.0/include" -DNDEBUG -I../inst/include -I'C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/include' -I"C:/Users/me/Documents/R/win-library/3.2/Rcpp/include" -I"C:/Users/me/Documents/R/win-library/3.2/RcppEigen/include" -I"C:/Users/me/Documents/R/win-library/3.2/RViennaCL/include" -I"C:/Users/me/Documents/R/win-library/3.2/BH/include" -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c vienna_stats.cpp -o vienna_stats.o
  33. C:\Rtools\mingw_64\bin\nm.exe: 'RcppExports.o': No such file
  34. C:\Rtools\mingw_64\bin\nm.exe: 'context.o': No such file
  35. C:\Rtools\mingw_64\bin\nm.exe: 'device.o': No such file
  36. C:\Rtools\mingw_64\bin\nm.exe: 'dynEigenMat.o': No such file
  37. C:\Rtools\mingw_64\bin\nm.exe: 'dynEigenVec.o': No such file
  38. C:\Rtools\mingw_64\bin\nm.exe: 'dynVCLMat.o': No such file
  39. C:\Rtools\mingw_64\bin\nm.exe: 'dynVCLVec.o': No such file
  40. C:\Rtools\mingw_64\bin\nm.exe: 'gpuEigenPtr.o': No such file
  41. C:\Rtools\mingw_64\bin\nm.exe: 'gpuMatrix_iaxpy.o': No such file
  42. C:\Rtools\mingw_64\bin\nm.exe: 'gpuMatrix_igemm.o': No such file
  43. C:\Rtools\mingw_64\bin\nm.exe: 'gpuVector_iaxpy.o': No such file
  44. C:\Rtools\mingw_64\bin\nm.exe: 'gpu_vector_algebra.o': No such file
  45. C:\Rtools\mingw_64\bin\nm.exe: 'platform.o': No such file
  46. C:\Rtools\mingw_64\bin\nm.exe: 'trunc_gpuMat.o': No such file
  47. C:\Rtools\mingw_64\bin\nm.exe: 'utils-vcl.o': No such file
  48. C:\Rtools\mingw_64\bin\nm.exe: 'utils.o': No such file
  49. C:\Rtools\mingw_64\bin\nm.exe: 'vclPtr.o': No such file
  50. C:\Rtools\mingw_64\bin\nm.exe: 'vienna_blas1.o': No such file
  51. C:\Rtools\mingw_64\bin\nm.exe: 'vienna_blas3.o': No such file
  52. C:\Rtools\mingw_64\bin\nm.exe: 'vienna_eigen.o': No such file
  53. C:\Rtools\mingw_64\bin\nm.exe: 'vienna_qr.o': No such file
  54. C:\Rtools\mingw_64\bin\nm.exe: 'vienna_stats.o': No such file
  55. g++ -m64 -shared -s -static-libgcc -o gpuR.dll tmp.def RcppExports.o context.o device.o dynEigenMat.o dynEigenVec.o dynVCLMat.o dynVCLVec.o gpuEigenPtr.o gpuMatrix_iaxpy.o gpuMatrix_igemm.o gpuVector_iaxpy.o gpu_vector_algebra.o platform.o trunc_gpuMat.o utils-vcl.o utils.o vclPtr.o vienna_blas1.o vienna_blas3.o vienna_eigen.o vienna_qr.o vienna_stats.o -LC:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/lib/x64 -lOpenCL -Wl,-rpath,C:/Program Files/NVIDIA GPU Computing Toolkit/CUDA/v7.5/lib/x64 -Ld:/RCompile/r-compiling/local/local320/lib/x64 -Ld:/RCompile/r-compiling/local/local320/lib -LC:/PROGRA~1/R/R-32~1.0/bin/x64 -lR
  56. no DLL was created
  57. ERROR: compilation failed for package 'gpuR'
  58. * removing 'C:/Users/me/Documents/R/win-library/3.2/gpuR'
  59. * restoring previous 'C:/Users/me/Documents/R/win-library/3.2/gpuR'
  60. Warning in install.packages :
  61. running command '"C:/PROGRA~1/R/R-32~1.0/bin/x64/R" CMD INSTALL -l "C:\Users\me\Documents\R\win-library\3.2" "C:/Users/me/Documents/cdeterman-gpuR-58b6d07.tar"' had status 1
  62. Warning in install.packages :
  63. installation of package ‘C:/Users/me/Documents/cdeterman-gpuR-58b6d07.tar’ had non-zero exit status
  64. >
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