Pastebin launched a little side project called VERYVIRAL.com, check it out ;-) Want more features on Pastebin? Sign Up, it's FREE!
Guest

Untitled

By: a guest on Sep 21st, 2011  |  syntax: None  |  size: 2.54 KB  |  views: 40  |  expires: Never
download  |  raw  |  embed  |  report abuse  |  print
Text below is selected. Please press Ctrl+C to copy to your clipboard. (⌘+C on Mac)
  1. ##!/bin/bash
  2. #$ -N fish-Assemblathon2-k31-20110921-4-g++-ofud
  3.  
  4. jobName=fish-Assemblathon2-k31-20110921-4-g++-ofud
  5.  
  6. #$ -P nne-790-ab
  7. #$ -l h_rt=48:00:00
  8. #$ -pe default 256
  9. #$ -R y
  10. #$ -cwd
  11.  
  12. module load compilers/gcc/4.4.2 mpi/openmpi/1.4.3_gcc
  13.  
  14.  
  15. cp /home/sboisver12/Ray /home/sboisver12/Ray-$jobName
  16.  
  17. mpiexec -n 256 -output-filename $jobName \
  18. --mca btl self,ofud \
  19. /home/sboisver12/Ray \
  20. -test-network-only
  21.  
  22.  
  23. [sboisver12@colosse1 Fish]$ ldd ~/Ray-fish-Assemblathon2-k31-20110921-4-g++-ofud
  24.         linux-vdso.so.1 =>  (0x00007fffb79fc000)
  25.         libmpi_cxx.so.0 => /software/MPI/openmpi-1.4.3_gcc/lib/libmpi_cxx.so.0 (0x00002b0d3585a000)
  26.         libmpi.so.0 => /software/MPI/openmpi-1.4.3_gcc/lib/libmpi.so.0 (0x00002b0d35a74000)
  27.         libopen-rte.so.0 => /software/MPI/openmpi-1.4.3_gcc/lib/libopen-rte.so.0 (0x00002b0d35f74000)
  28.         libopen-pal.so.0 => /software/MPI/openmpi-1.4.3_gcc/lib/libopen-pal.so.0 (0x00002b0d3623b000)
  29.         librdmacm.so.1 => /usr/lib64/librdmacm.so.1 (0x0000003ee8c00000)
  30.         libibverbs.so.1 => /usr/lib64/libibverbs.so.1 (0x0000003ee8400000)
  31.         libdl.so.2 => /lib64/libdl.so.2 (0x0000003ee8000000)
  32.         libnsl.so.1 => /lib64/libnsl.so.1 (0x0000003ef0000000)
  33.         libutil.so.1 => /lib64/libutil.so.1 (0x0000003ef4400000)
  34.         libstdc++.so.6 => /software/gcc-4.4.2/lib64/libstdc++.so.6 (0x00002b0d364d5000)
  35.         libm.so.6 => /lib64/libm.so.6 (0x00002b0d367e4000)
  36.         libgcc_s.so.1 => /software/gcc-4.4.2/lib64/libgcc_s.so.1 (0x00002b0d36a68000)
  37.         libpthread.so.0 => /lib64/libpthread.so.0 (0x0000003ee8800000)
  38.         libc.so.6 => /lib64/libc.so.6 (0x0000003ee7c00000)
  39.         /lib64/ld-linux-x86-64.so.2 (0x0000003ee7800000)
  40.  
  41.  
  42.  
  43. [sboisver12@colosse1 Fish]$ ~/git-clones/colosse-tools/ViewJobHosts.py 3047410|head
  44. Queue name      Mode    Job name        Job identifier  Host    Number of cores Memory  Average load    Utilised memory
  45. med@r101-n17    SLAVE   fish-Assemblathon2-k31-20110921-4-g++-ofud      3047410 r101-n17        8       23.6G   7.16    777.2M
  46. med@r101-n17    SLAVE   fish-Assemblathon2-k31-20110921-4-g++-ofud      3047410 r101-n17        8       23.6G   7.16    777.2M
  47. med@r101-n17    SLAVE   fish-Assemblathon2-k31-20110921-4-g++-ofud      3047410 r101-n17        8       23.6G   7.16    777.2M
  48. med@r101-n17    SLAVE   fish-Assemblathon2-k31-20110921-4-g++-ofud      3047410 r101-n17        8       23.6G   7.16    777.2M
  49. med@r101-n17    SLAVE   fish-Assemblathon2-k31-20110921-4-g++-ofud      3047410 r101-n17        8       23.6G   7.16    777.2M
  50. med@r101-n17    SLAVE   fish-Assemblathon2-k31-20110921-4-g++-ofud      3047410 r101-n17        8       23.6G   7.16    777.2M
  51. med@r101-n17    SLAVE   fish-Assemblathon2-k31-20110921-4-g++-ofud      3047410 r101-n17        8       23.6G   7.16    777.2M
  52. med@r101-n17    SLAVE   fish-Assemblathon2-k31-20110921-4-g++-ofud      3047410 r101-n17        8       23.6G   7.16    777.2M
clone this paste RAW Paste Data