sci-physics/root-6.02.05-r2/temp/build.log

 * Package:    sci-physics/root-6.02.05-r2
 * Repository: gentoo
 * Maintainer: bircoph@gentoo.org sci-physics@gentoo.org
 * USE:        X abi_x86_32 elibc_glibc emacs examples kerberos kernel_linux math memstat opengl openmp python python_targets_python2_7 qt4 ssl tiff userland_GNU x86 xml
 * FEATURES:   preserve-libs sandbox userpriv usersandbox
 * Using following Fortran compiler:
 *   F77: i686-pc-linux-gnu-gfortran
 *   FC:  i686-pc-linux-gnu-gfortran

 * There are extra options on packages not yet in Gentoo:
 * Afdsmgrd, AliEn, castor, Chirp, dCache, gfal, Globus, gLite,
 * HDFS, Monalisa, MaxDB/SapDB, SRP.
 * You can use the env variable EXTRA_ECONF variable for this.
 * For example, for SRP, you would set:
 * EXTRA_ECONF="--enable-srp --with-srp-libdir=/usr/lib"

>>> Unpacking source...
>>> Unpacking root_v6.02.05.source.tar.gz to /var/tmp/portage/sci-physics/root-6.02.05-r2/work
>>> Source unpacked in /var/tmp/portage/sci-physics/root-6.02.05-r2/work
>>> Preparing source in /var/tmp/portage/sci-physics/root-6.02.05-r2/work/root-6.02.05 ...
 * Applying root-5.28.00b-glibc212.patch ...
 [ ok ]
 * Applying root-5.32.00-afs.patch ...
 [ ok ]
 * Applying root-5.32.00-cfitsio.patch ...
 [ ok ]
 * Applying root-5.32.00-chklib64.patch ...
 [ ok ]
 * Applying root-5.34.13-desktop.patch ...
 [ ok ]
 * Applying root-5.34.13-unuran.patch ...
 [ ok ]
 * Applying root-6.00.01-dotfont.patch ...
 [ ok ]
 * Applying root-6.00.01-geocad.patch ...
 [ ok ]
 * Applying root-6.00.01-llvm.patch ...
 [ ok ]
 * Applying root-6.00.01-nobyte-compile.patch ...
 [ ok ]
 * Applying root-6.00.01-prop-flags.patch ...
 [ ok ]
 * Applying root-6.02.05-dictpch.patch ...
 [ ok ]
 * Applying root-6.02.05-xrootd4.patch ...
 [ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-physics/root-6.02.05-r2/work/root-6.02.05 ...
Checking for source directory ... /var/tmp/portage/sci-physics/root-6.02.05-r2/work/root-6.02.05
Configuring for linux
INFO: --enable-shared: already enabled by default.
INFO: --enable-x11: already enabled by default.
INFO: --enable-asimage: already enabled by default.
INFO: --enable-xft: already enabled by default.
INFO: --enable-krb5: already enabled by default.
INFO: --enable-genvector: already enabled by default.
INFO: --enable-mathmore: already enabled by default.
INFO: --enable-tmva: already enabled by default.
INFO: --enable-vdt: already enabled by default.
INFO: --enable-memstat: already enabled by default.
INFO: --enable-opengl: already enabled by default.
INFO: --enable-python: already enabled by default.
INFO: --enable-ssl: already enabled by default.
INFO: --enable-astiff: already enabled by default.
INFO: --enable-xml: already enabled by default.
Checking for GNU Make version >= 3.80 ... ok
Checking for C compiler ... i686-pc-linux-gnu-gcc
Checking for C++ compiler ... i686-pc-linux-gnu-g++
Checking for linker (LD) ... i686-pc-linux-gnu-g++
Checking for F77 compiler ... i686-pc-linux-gnu-gfortran
Checking whether c++11 mode is supported ... yes
Checking for Python version >= 2.5 ... yes
Checking for libX11 ... /usr/lib
Checking for X11/Xlib.h ... /usr/include
Checking for X11/xpm.h ... /usr/include
Checking for X11/Xft/Xft.h ... /usr/include
Checking for X11/extensions/shape.h ... /usr/include
Checking for libXpm ... /usr/lib
Checking for libXft ... /usr/lib
Checking for libXext ... /usr/lib
Checking for freetype-config ... /usr/bin/freetype-config
Checking for libfreetype version >= 9.3.0 ... ok
Checking whether to build included libfreetype6 ... no
Checking for pcre-config ... /usr/bin/pcre-config
Checking for libpcre version >= 3.9 ... ok
Checking whether to build included libpcre ... no
Checking for zlib.h ... /usr/include
Checking for libz ... /usr/lib
Checking whether to build included zlib ... no
Checking for lzma.h ... /usr/include
Checking for liblzma ... /usr/lib
Checking whether to build included lzma ... no
Checking for GL/gl.h, or gl.h ... /usr/include
Checking for libGL, or libMesaGL ... /usr/lib
Checking for libGLU, or libMesaGLU ... /usr/lib
Checking for GL/glew.h ... /usr/include
Checking for libGLEW ... /usr/lib
Checking whether to build included GLEW ... no
Checking for pkg-config ... /usr/bin/pkg-config
Checking for libftgl ... ok
Checking for ftgl version > 2.1.2 ... ok
Checking whether to build included libftgl ... no
Checking for sql.h ... no
Checking for libsqlod ... no
Checking for Qt/qglobal.h ... /usr/include/qt4
Checking for 4.8.0 <= Qt version < 5.0.0  ... 4.8.5
Checking for libQtCore, QtCore, QtCore4, or QtCore4 ... /usr/lib/qt4
Checking for libQtGui, QtGui, QtGui4, or QtGui4 ... /usr/lib/qt4
Checking for libQt3Support, Qt3Support, Qt3Support4, or Qt3Support4 ... /usr/lib/qt4
Checking for moc or moc.exe ... /usr/bin/moc
Checking for rfio_api.h ... no
Checking for librfio, libdpm, libcastorrfio, libshift, shiftmd, or shift ... no
Checking for rfio_api.h ... no
Checking for stager_api.h ... no
Checking for libcastorrfio, libshift, shiftmd, or shift ... no
Checking for gfal_api.h ... no
Checking for libgfal ... no
Checking for gfal_srm_ifce_types.h ... no
Checking for ApMon.h ... no
Checking for libapmoncpp ... no
Checking for dcap.h ... no
Checking for libdcap ... no
Checking for davix.hpp ... no
Checking for libdavix ... no
Checking for chirp_reli.h ... no
Checking for libchirp_client ... no
Checking for hdfs.h ... no
Checking for jni.h ... /etc/java-config-2/current-system-vm/include
Checking for libhdfs ... no
Checking for libjvm ... /etc/java-config-2/current-system-vm/jre/lib/i386/server
Checking for libglite-api-wrapper ... no
Checking for gapiUI.h ... no
Checking for libgapiUI ... no
Checking for afterimage-config ... /usr/bin/afterimage-config
Checking whether to build included libAfterImage ... no
Checking for PyROOT prerequisites ... yes
Checking for Python.h ... /usr/include/python2.7
Checking for python2.7, libpython2.7, libpython, python, or Python ... /usr/lib
Checking for xml2-config ... /usr/bin/xml2-config
Checking for libxml2 version >= 2.4.x ... ok
Checking for libssl ... /usr/lib
Checking for libcrypto ... /usr/lib
Checking for openssl/bio.h ... /usr/include
Checking for openssl/blowfish.h ... /usr/include
Checking for openssl/err.h ... /usr/include
Checking for openssl/pem.h ... /usr/include
Checking for openssl/rand.h ... /usr/include
Checking for openssl/rsa.h ... /usr/include
Checking for t_server.h ... no
Checking for libsrp ... no
Checking for libgmp ... /usr/lib
Checking for libmisc ... no
Checking for pwauth.h ... no
Checking for krb5.h ... /usr/include
Checking for krb5.h redirect ... /usr/include/krb5/krb5.h
Checking for krb5_c_valid_cksumtype in krb5.h ... yes
Checking for valid_cksumtype in krb5.h ... no
Checking for libk5crypto ... /usr/lib
Checking whether we're using MIT Kerberos ... yes
Checking for krb5_c_valid_cksumtype in /usr/lib/libk5crypto.so ... ok
Checking for valid_cksumtype in /usr/lib/libk5crypto.so ... ok
Checking for libkrb5 ... /usr/lib
Checking for kinit ... /usr/bin/kinit
Checking for libcom_err ... /usr/lib
Checking for shadow passwords ... no
Checking required compiler/assembler workarounds ...  -Wno-unused-function
Checking SIMD specific compiler flags ... -mavx -msse4.1 -mssse3 -msse3 -msse2 -DVC_IMPL=SSE+XOP+FMA4~-mxop~-mfma4 -mavx~-mxop~-mfma4
Checking ABI version compiler flags ... -fabi-version=0
Checking for gsl/gsl_version.h ... /usr/include
Checking for GSL version >= 1.10 ... ok
Checking for libgsl, gslML, or gsl ... /usr/lib
Checking for libgslcblas, gslcblasML, gslcblas, or cblas ... /usr/lib
Checking whether to build libMathMore ... yes
Checking whether to build libGenVector ... yes
Checking whether to build libRooFit ... yes
Checking whether to build libMinuit2 ... yes
Checking whether to build libUnuran ... yes
Checking whether to build libVc ... yes
Checking whether to install VDT ... yes
Checking whether to build libGdml ... no
Checking whether to build libTable ... no
Checking whether to build libTMVA ... yes
Checking whether to build libRHTTP ... no
Checking whether to build libMemStat ... yes
Checking whether to build afdsmgrd ... no
Checking whether setresuid declared in /usr/include/unistd.h ... yes
Creating include ... done
Creating bin ... done
Creating lib ... done
Writing config/Makefile.config ... done
Writing config/Makefile.comp ... done
Writing include/RConfigure.h ... done
Writing include/RConfigOptions.h ... done
Writing bin/root-config ... done
Writing etc/system.rootrc ... done
Writing etc/system.rootauthrc ... done
Writing etc/system.rootdaemonrc ... done
Writing etc/root.mimes ... done
Writing etc/daemons/rootd.rc.d ... done
Writing etc/daemons/rootd.xinetd ... done
Writing etc/daemons/proofd.rc.d ... done
Writing etc/daemons/proofd.xinetd ... done
Writing main/src/proofserv.sh ... done
Writing main/src/roots.sh ... done
Writing bin/memprobe ... done
Writing build/misc/root-help.el ... done
Writing macros/html.C ... done
Writing bin/thisroot.sh ... done
Writing bin/thisroot.csh ... done
Writing bin/setxrd.sh ... done
Writing bin/setxrd.csh ... done
Writing config.status ... done

Enabled support for asimage, astiff, builtin_llvm, explicitlink, genvector, gsl_shared, krb5, mathmore, memstat, minuit2, opengl, python, qt, qtgsi, roofit, shared, soversion, ssl, tmva, unuran, vc, vdt, x11, xft, xml.
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-physics/root-6.02.05-r2/work/root-6.02.05 ...
make -j5 'OPT=-O2 -march=i686 -pipe' 'F77OPT=-O2 -march=i686 -pipe' ROOTSYS=/var/tmp/portage/sci-physics/root-6.02.05-r2/work/root-6.02.05 LD_LIBRARY_PATH=/var/tmp/portage/sci-physics/root-6.02.05-r2/work/root-6.02.05/lib
cp /var/tmp/portage/sci-physics/root-6.02.05-r2/work/root-6.02.05/core/metautils/inc/ESTLType.h include/ESTLType.h


<... snip ...>


==> lib/libTMVA.so done
i686-pc-linux-gnu-g++ -shared -Wl,-soname,libTreeViewer.so.6.02 -m32 -O2 -DNDEBUG -Wl,-O1 -Wl,--as-needed -Wl,--no-undefined -Wl,--as-needed -o lib/libTreeViewer.so.6.02 tree/treeviewer/src/TTreeViewer.o tree/treeviewer/src/TTVSession.o tree/treeviewer/src/TTVLVContainer.o tree/treeviewer/src/HelpTextTV.o tree/treeviewer/src/TSpider.o tree/treeviewer/src/TSpiderEditor.o tree/treeviewer/src/TParallelCoord.o tree/treeviewer/src/TParallelCoordVar.o tree/treeviewer/src/TParallelCoordRange.o tree/treeviewer/src/TParallelCoordEditor.o tree/treeviewer/src/TGTreeTable.o tree/treeviewer/src/TMemStatShow.o tree/treeviewer/src/G__TreeViewer.o -Llib -lTree -lGpad -lGraf -lHist -lGui -lTreePlayer -lGed -lRIO -lMathCore -Llib -lCore -ldl
bin/rmkdepend -R -fgraf3d/gviz3d/src/G__Gviz3d.d -Y -w 1000 -- -pipe -m32 -msse -mfpmath=sse -Wall -W -Woverloaded-virtual -fPIC -msse -mfpmath=sse -std=c++11 -Wno-deprecated-declarations -Iinclude -DR__HAVE_CONFIG -O2 -march=i686 -pipe -pthread -D__cplusplus -- graf3d/gviz3d/src/G__Gviz3d.cxx
i686-pc-linux-gnu-g++  -pipe -m32 -msse -mfpmath=sse -Wall -W -Woverloaded-virtual -fPIC -msse -mfpmath=sse -std=c++11 -Wno-deprecated-declarations -Iinclude -DR__HAVE_CONFIG -O2 -march=i686 -pipe -pthread -I. -o graf3d/gviz3d/src/G__Gviz3d.o -c graf3d/gviz3d/src/G__Gviz3d.cxx
==> lib/libTreeViewer.so done
i686-pc-linux-gnu-g++ -shared -Wl,-soname,libRooStats.so.6.02 -m32 -O2 -DNDEBUG -Wl,-O1 -Wl,--as-needed -Wl,--no-undefined -Wl,--as-needed -o lib/libRooStats.so.6.02 roofit/roostats/src/SequentialProposal.o roofit/roostats/src/SimpleLikelihoodRatioTestStat.o roofit/roostats/src/ProfileLikelihoodCalculator.o roofit/roostats/src/SamplingDistribution.o roofit/roostats/src/ProposalHelper.o roofit/roostats/src/LikelihoodIntervalPlot.o roofit/roostats/src/HybridCalculator.o roofit/roostats/src/NumberCountingPdfFactory.o roofit/roostats/src/BayesianCalculator.o roofit/roostats/src/ConfidenceBelt.o roofit/roostats/src/RatioOfProfiledLikelihoodsTestStat.o roofit/roostats/src/HybridResult.o roofit/roostats/src/HypoTestResult.o roofit/roostats/src/ModelConfig.o roofit/roostats/src/ToyMCStudy.o roofit/roostats/src/FrequentistCalculator.o roofit/roostats/src/FeldmanCousins.o roofit/roostats/src/ProfileLikelihoodTestStat.o roofit/roostats/src/ToyMCSampler.o roofit/roostats/src/ToyMCImportanceSampler.o roofit/roostats/src/
LikelihoodInterval.o roofit/roostats/src/HypoTestInverterPlot.o roofit/roostats/src/HybridCalculatorOriginal.o roofit/roostats/src/HypoTestInverterResult.o roofit/roostats/src/HypoTestPlot.o roofit/roostats/src/UpperLimitMCSModule.o roofit/roostats/src/NeymanConstruction.o roofit/roostats/src/PointSetInterval.o roofit/roostats/src/MetropolisHastings.o roofit/roostats/src/MCMCIntervalPlot.o roofit/roostats/src/BernsteinCorrection.o roofit/roostats/src/MCMCCalculator.o roofit/roostats/src/ProfileInspector.o roofit/roostats/src/UniformProposal.o roofit/roostats/src/PdfProposal.o roofit/roostats/src/AsymptoticCalculator.o roofit/roostats/src/HLFactory.o roofit/roostats/src/SamplingDistPlot.o roofit/roostats/src/HybridPlot.o roofit/roostats/src/DetailedOutputAggregator.o roofit/roostats/src/MarkovChain.o roofit/roostats/src/SimpleInterval.o roofit/roostats/src/SPlot.o roofit/roostats/src/HypoTestInverter.o roofit/roostats/src/HypoTestCalculatorGeneric.o roofit/roostats/src/HypoTestInverterOriginal.o roofit/
roostats/src/Heaviside.o roofit/roostats/src/MCMCInterval.o roofit/roostats/src/NumberCountingUtils.o roofit/roostats/src/RooStatsUtils.o roofit/roostats/src/G__RooStats.o -Llib -lRooFit -lRooFitCore -lTree -lRIO -lHist -lMatrix -lMathCore -lMinuit -lFoam -lGraf -lGpad -lMathMore -Llib -lCore -ldl
i686-pc-linux-gnu-g++ -shared -Wl,-soname,libRGL.so.6.02 -m32 -O2 -DNDEBUG -Wl,-O1 -Wl,--as-needed -Wl,--no-undefined -Wl,--as-needed -o lib/libRGL.so.6.02 graf3d/gl/src/TGLOrthoCamera.o graf3d/gl/src/TGLCamera.o graf3d/gl/src/TGLWidget.o graf3d/gl/src/TGLParametric.o graf3d/gl/src/TPointSet3DGL.o graf3d/gl/src/TH3GL.o graf3d/gl/src/TGLFontManager.o graf3d/gl/src/TGLScaleManip.o graf3d/gl/src/TGLContext.o graf3d/gl/src/TGLPShapeObj.o graf3d/gl/src/TGLStopwatch.o graf3d/gl/src/TGLScenePad.o graf3d/gl/src/TGLPadUtils.o graf3d/gl/src/TGLPShapeRef.o graf3d/gl/src/TH2GL.o graf3d/gl/src/TGLOutput.o graf3d/gl/src/TGLFBO.o graf3d/gl/src/TGLPShapeObjEditor.o graf3d/gl/src/TGLClipSetEditor.o graf3d/gl/src/TGLIsoMesh.o graf3d/gl/src/TGL5DPainter.o graf3d/gl/src/TGLPerspectiveCamera.o graf3d/gl/src/TKDEAdapter.o graf3d/gl/src/TGLViewerEditor.o graf3d/gl/src/TGLPadPainter.o graf3d/gl/src/TGLQuadric.o graf3d/gl/src/TGLCameraOverlay.o graf3d/gl/src/TKDEFGT.o graf3d/gl/src/TGLObject.o graf3d/gl/src/TGL5D.o graf3d/gl/src/
CsgOps.o graf3d/gl/src/TGLText.o graf3d/gl/src/TGLPlot3D.o graf3d/gl/src/TGLTransManip.o graf3d/gl/src/TGLTF3Painter.o graf3d/gl/src/TGLSelectRecord.o graf3d/gl/src/TGLFormat.o graf3d/gl/src/TGLOverlayButton.o graf3d/gl/src/TX11GL.o graf3d/gl/src/TGLBoundingBox.o graf3d/gl/src/TGLH2PolyPainter.o graf3d/gl/src/TGLSphere.o graf3d/gl/src/TGLPlotCamera.o graf3d/gl/src/TGLCameraGuide.o graf3d/gl/src/TGLSceneInfo.o graf3d/gl/src/TGLLightSetEditor.o graf3d/gl/src/TGLPolyLine.o graf3d/gl/src/TGLAutoRotator.o graf3d/gl/src/TGL5DDataSetEditor.o graf3d/gl/src/TGLParametricEquationGL.o graf3d/gl/src/TGLPolyMarker.o graf3d/gl/src/TGLContextPrivate.o graf3d/gl/src/TGLSAViewer.o graf3d/gl/src/TGLCylinder.o graf3d/gl/src/TGLLockable.o graf3d/gl/src/TArcBall.o graf3d/gl/src/TGLUtil.o graf3d/gl/src/TGLPlotPainter.o graf3d/gl/src/TGLPhysicalShape.o graf3d/gl/src/TGLSurfacePainter.o graf3d/gl/src/TGLManipSet.o graf3d/gl/src/TGLSceneBase.o graf3d/gl/src/TGLLogicalShape.o graf3d/gl/src/TGLScene.o graf3d/gl/src/TGLViewer.o graf3d/
gl/src/TGLTH3Composition.o graf3d/gl/src/TGLManip.o graf3d/gl/src/TGLVoxelPainter.o graf3d/gl/src/TGLBoxPainter.o graf3d/gl/src/TGLLegoPainter.o graf3d/gl/src/TGLOverlay.o graf3d/gl/src/TGLAxisPainter.o graf3d/gl/src/TGLAdapter.o graf3d/gl/src/TGLEventHandler.o graf3d/gl/src/TGLSAFrame.o graf3d/gl/src/TGLAxis.o graf3d/gl/src/TF2GL.o graf3d/gl/src/TGLLightSet.o graf3d/gl/src/TGLEmbeddedViewer.o graf3d/gl/src/TGLFaceSet.o graf3d/gl/src/TGLClip.o graf3d/gl/src/TGLViewerBase.o graf3d/gl/src/TGLSelectBuffer.o graf3d/gl/src/TGLPlotBox.o graf3d/gl/src/TGLRnrCtx.o graf3d/gl/src/TGLRotateManip.o graf3d/gl/src/TGLHistPainter.o graf3d/gl/src/TGLMarchingCubes.o graf3d/gl/src/TGLAnnotation.o graf3d/gl/src/G__RGL.o -Llib -lGpad -lGraf3d -lGui -lGraf -lHist -lGed -lMathCore -lTree -lTreePlayer -lRIO -lftgl -lGLEW -lGLU -lGL -lgl2ps -lXpm -lXext -lX11 -lm -Llib -lCore -ldl
==> lib/libRooStats.so done
i686-pc-linux-gnu-g++ -shared -Wl,-soname,libGenetic.so.6.02 -m32 -O2 -DNDEBUG -Wl,-O1 -Wl,--as-needed -Wl,--no-undefined -Wl,--as-needed -o lib/libGenetic.so.6.02 math/genetic/src/GeneticMinimizer.o math/genetic/src/G__Genetic.o -Llib -lRIO -lHist -lMatrix -lTree -lGraf -lGpad -lTreePlayer -lMLP -lMinuit -lMathCore -lXMLIO -lTMVA -Llib -lCore -ldl
bin/rmkdepend -R -fgraf3d/eve/src/G__Eve.d -Y -w 1000 -- -pipe -m32 -msse -mfpmath=sse -Wall -W -Woverloaded-virtual -fPIC -msse -mfpmath=sse -std=c++11 -Wno-deprecated-declarations -Iinclude -DR__HAVE_CONFIG -O2 -march=i686 -pipe -pthread  -I/usr/include/FTGL -I/usr/include/freetype2  -D__cplusplus -- graf3d/eve/src/G__Eve.cxx
i686-pc-linux-gnu-g++  -pipe -m32 -msse -mfpmath=sse -Wall -W -Woverloaded-virtual -fPIC -msse -mfpmath=sse -std=c++11 -Wno-deprecated-declarations -Iinclude -DR__HAVE_CONFIG -O2 -march=i686 -pipe -pthread  -I/usr/include/FTGL -I/usr/include/freetype2  -I. -o graf3d/eve/src/G__Eve.o -c graf3d/eve/src/G__Eve.cxx
==> lib/libGenetic.so done
==> lib/libRGL.so done
i686-pc-linux-gnu-g++ -shared -Wl,-soname,libGviz3d.so.6.02 -m32 -O2 -DNDEBUG -Wl,-O1 -Wl,--as-needed -Wl,--no-undefined -Wl,--as-needed -o lib/libGviz3d.so.6.02 graf3d/gviz3d/src/TStructNodeProperty.o graf3d/gviz3d/src/TStructNodeEditor.o graf3d/gviz3d/src/TStructViewer.o graf3d/gviz3d/src/TStructViewerGUI.o graf3d/gviz3d/src/TStructNode.o graf3d/gviz3d/src/G__Gviz3d.o -Llib -lGui -lGed -lGpad -lGraf3d -lGraf -lGeom -lRGL -Llib -lCore -ldl
==> lib/libGviz3d.so done
i686-pc-linux-gnu-g++ -shared -Wl,-soname,libHistFactory.so.6.02 -m32 -O2 -DNDEBUG -Wl,-O1 -Wl,--as-needed -Wl,--no-undefined -Wl,--as-needed -o lib/libHistFactory.so.6.02 roofit/histfactory/src/hist2workspace.o roofit/histfactory/src/Channel.o roofit/histfactory/src/ConfigParser.o roofit/histfactory/src/Data.o roofit/histfactory/src/EstimateSummary.o roofit/histfactory/src/HistoToWorkspaceFactoryFast.o roofit/histfactory/src/HistoToWorkspaceFactory.o roofit/histfactory/src/Measurement.o roofit/histfactory/src/LinInterpVar.o roofit/histfactory/src/PreprocessFunction.o roofit/histfactory/src/Asimov.o roofit/histfactory/src/RooBarlowBeestonLL.o roofit/histfactory/src/HistFactorySimultaneous.o roofit/histfactory/src/Sample.o roofit/histfactory/src/HistRef.o roofit/histfactory/src/PiecewiseInterpolation.o roofit/histfactory/src/FlexibleInterpVar.o roofit/histfactory/src/Systematics.o roofit/histfactory/src/HistFactoryNavigation.o roofit/histfactory/src/ParamHistFunc.o roofit/histfactory/src/
MakeModelAndMeasurementsFast.o roofit/histfactory/src/MakeModelAndMeasurements.o roofit/histfactory/src/Helper.o roofit/histfactory/src/HistFactoryModelUtils.o roofit/histfactory/src/G__HistFactory.o -Llib -lRooFit -lRooFitCore -lTree -lRIO -lHist -lMatrix -lMathCore -lMinuit -lFoam -lGraf -lGpad -lRooStats -lXMLParser -lMathMore -Llib -lCore -ldl
==> lib/libHistFactory.so done
i686-pc-linux-gnu-g++ -m32 -O2 -DNDEBUG -Wl,-O1 -Wl,--as-needed -Wl,--no-undefined -Wl,--as-needed -o bin/hist2workspace roofit/histfactory/src/MakeModelAndMeasurements.o roofit/histfactory/src/hist2workspace.o  \
	    -Llib -lRIO -lHist -lGraf -lGraf3d -lGpad -lTree -lMatrix -lNet -lThread -lMathCore -lCore -lRint -Llib -lRooFit -lRooFitCore -lTree -lRIO -lMatrix -lHist -lMathCore -lGraf -lGpad -lMinuit -lFoam -lRooStats -lXMLParser -lHistFactory -lMathMore  -lgsl -lgslcblas \
	   -lm -ldl  -pthread   -rdynamic
i686-pc-linux-gnu-g++ -shared -Wl,-soname,libEve.so.6.02 -m32 -O2 -DNDEBUG -Wl,-O1 -Wl,--as-needed -Wl,--no-undefined -Wl,--as-needed -o lib/libEve.so.6.02 graf3d/eve/src/TEveRGBAPaletteEditor.o graf3d/eve/src/TEveScene.o graf3d/eve/src/TEveGeoPolyShape.o graf3d/eve/src/TEveTrackProjectedGL.o graf3d/eve/src/TEveProjectionAxesGL.o graf3d/eve/src/TEveLine.o graf3d/eve/src/TEveGeoNodeEditor.o graf3d/eve/src/TEveQuadSet.o graf3d/eve/src/TEveCalo.o graf3d/eve/src/TEveProjections.o graf3d/eve/src/TEveTrackPropagator.o graf3d/eve/src/TEvePointSet.o graf3d/eve/src/TEveChunkManager.o graf3d/eve/src/TEveRGBAPaletteOverlay.o graf3d/eve/src/TEveCaloLegoGL.o graf3d/eve/src/TEvePlot3D.o graf3d/eve/src/TEveGridStepper.o graf3d/eve/src/TEveTrackEditor.o graf3d/eve/src/TEveProjectionManagerEditor.o graf3d/eve/src/TEveDigitSetEditor.o graf3d/eve/src/TEveTriangleSet.o graf3d/eve/src/TEveDigitSetGL.o graf3d/eve/src/TEveLegoEventHandler.o graf3d/eve/src/TEveShape.o graf3d/eve/src/TEveViewer.o graf3d/eve/src/
TEvePolygonSetProjectedGL.o graf3d/eve/src/TEveBoxSetGL.o graf3d/eve/src/TEveText.o graf3d/eve/src/TEveWindowManager.o graf3d/eve/src/TEveJetConeEditor.o graf3d/eve/src/TEveProjectionAxesEditor.o graf3d/eve/src/TEveJetCone.o graf3d/eve/src/TEvePathMark.o graf3d/eve/src/TEveMacro.o graf3d/eve/src/TEveVSD.o graf3d/eve/src/TEveArrow.o graf3d/eve/src/TEvePad.o graf3d/eve/src/TEveVector.o graf3d/eve/src/TEveTrackGL.o graf3d/eve/src/TEveProjectionBases.o graf3d/eve/src/TEveScalableStraightLineSet.o graf3d/eve/src/TEveBoxSet.o graf3d/eve/src/TEveLineEditor.o graf3d/eve/src/TEveDigitSet.o graf3d/eve/src/TEveViewerListEditor.o graf3d/eve/src/TEveWindow.o graf3d/eve/src/TEveTreeTools.o graf3d/eve/src/TEveGeoNode.o graf3d/eve/src/TEveGedEditor.o graf3d/eve/src/TEveTriangleSetGL.o graf3d/eve/src/TEveSecondarySelectable.o graf3d/eve/src/TEveCompound.o graf3d/eve/src/TEveCaloVizEditor.o graf3d/eve/src/TEveTextGL.o graf3d/eve/src/TEveFrameBox.o graf3d/eve/src/TEveGValuators.o graf3d/eve/src/TEveTransEditor.o graf3d/eve/src/
TEveElementEditor.o graf3d/eve/src/TEveProjectionManager.o graf3d/eve/src/TEveRGBAPalette.o graf3d/eve/src/TEveStraightLineSet.o graf3d/eve/src/TEveElement.o graf3d/eve/src/TEveTrackProjected.o graf3d/eve/src/TEveCaloLegoOverlay.o graf3d/eve/src/TEveArrowGL.o graf3d/eve/src/TEveShapeEditor.o graf3d/eve/src/TEveBox.o graf3d/eve/src/TEveArrowEditor.o graf3d/eve/src/TEveCalo2DGL.o graf3d/eve/src/TEveQuadSetGL.o graf3d/eve/src/TEveBrowser.o graf3d/eve/src/TEveTrackPropagatorEditor.o graf3d/eve/src/TEveTextEditor.o graf3d/eve/src/TEveManager.o graf3d/eve/src/TEveGeoShape.o graf3d/eve/src/TEveJetConeGL.o graf3d/eve/src/TEveSelection.o graf3d/eve/src/TEveWindowEditor.o graf3d/eve/src/TEveCalo3DGL.o graf3d/eve/src/TEveStraightLineSetEditor.o graf3d/eve/src/TEveBoxGL.o graf3d/eve/src/TEveProjectionAxes.o graf3d/eve/src/TEveLineGL.o graf3d/eve/src/TEveStraightLineSetGL.o graf3d/eve/src/TEveTrack.o graf3d/eve/src/TEveCaloLegoEditor.o graf3d/eve/src/TEvePlot3DGL.o graf3d/eve/src/TEveFrameBoxGL.o graf3d/eve/src/
TEvePolygonSetProjected.o graf3d/eve/src/TEveCaloData.o graf3d/eve/src/TEveGeoShapeExtract.o graf3d/eve/src/TEveSceneInfo.o graf3d/eve/src/TEveVSDStructs.o graf3d/eve/src/TEveTrans.o graf3d/eve/src/TEveGridStepperEditor.o graf3d/eve/src/TEveUtil.o graf3d/eve/src/TEveEventManager.o graf3d/eve/src/TEvePointSetArrayEditor.o graf3d/eve/src/TEveTriangleSetEditor.o graf3d/eve/src/TEveParamList.o graf3d/eve/src/G__Eve.o -Llib -lGeom -lGeomPainter -lGraf3d -lGui -lGpad -lGraf -lHist -lPhysics -lGed -lEG -lTree -lTreePlayer -lRGL -lRIO -lRint -lMathCore -lftgl -lGLEW -lGLU -lGL -lgl2ps -lXpm -lXext -lX11 -lm -Llib -lCore -ldl
==> lib/libEve.so done

Generating PCH for core/base core/thread io/io math/mathcore net/net math/matrix hist/hist tree/tree graf2d/graf graf2d/gpad gui/gui math/minuit hist/histpainter tree/treeplayer tree/treeviewer math/physics graf2d/postscript core/rint math/smatrix math/smatrix hist/spectrum hist/spectrumpainter gui/fitpanel graf2d/x11 graf2d/x11ttf graf3d/gl graf2d/asimage graf2d/asimage bindings/pyroot math/genvector math/genvector math/mathmore math/minuit2 roofit/roofitcore roofit/roofit roofit/roostats roofit/histfactory hist/hbook tmva math/genetic


   ============================================================
   ===                ROOT BUILD SUCCESSFUL.                ===
   === Run 'make install' now.                              ===
   ============================================================
Installing binaries in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/bin
Installing libraries in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/lib/root
Installing headers in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/include/root
Installing /var/tmp/portage/sci-physics/root-6.02.05-r2/work/root-6.02.05/main/src/rmain.cxx in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/include/root
Installing icons in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/share/root/icons
Installing fonts in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/share/root/fonts
Installing misc docs in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/share/doc/root-6.02.05
Installing tutorials in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/share/doc/root-6.02.05/examples/tutorials
Installing tests in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/share/doc/root-6.02.05/examples/tests
Installing macros in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/share/root/macros
Installing man(1) pages in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/share/man/man1
Installing config files in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//etc/root
Installing Autoconf macro in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/share/aclocal
Installing Emacs Lisp library in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/share/emacs/site-lisp
Installing GDML conversion scripts in /var/tmp/portage/sci-physics/root-6.02.05-r2/image//usr/lib/root
Warning in cling::CIFactory::createCI():
  C++ ABI mismatch, compiled with __GLIBCXX__ v20140522 running with v20141219

Processing hsimple.C...
hsimple   : Real Time =   0.16 seconds Cpu Time =   0.14 seconds
(class TFile *) 0xac1c338
 * Installing Elisp files for GNU Emacs support ...
 [ ok ]
ERROR in cling::CIFactory::createCI():
  resource directory /etc/root/cling/lib/clang/3.6.0 not found!
In file included from input_line_3:2:
In file included from /usr/lib/gcc/i686-pc-linux-gnu/4.8.4/include/g++-v4/string:40:
In file included from /usr/lib/gcc/i686-pc-linux-gnu/4.8.4/include/g++-v4/bits/char_traits.h:40:
In file included from /usr/lib/gcc/i686-pc-linux-gnu/4.8.4/include/g++-v4/bits/postypes.h:40:
In file included from /usr/lib/gcc/i686-pc-linux-gnu/4.8.4/include/g++-v4/cwchar:44:
/usr/include/wchar.h:39:11: fatal error: 'stdarg.h' file not found
# include <stdarg.h>
          ^
lookup.type.by.name.file:1:1: error: unknown type name 'Double32_t'
Double32_t
^

 *** Break *** segmentation violation



===========================================================
There was a crash (#8 0x086d6b8b in SigHandler(ESignals) ()).
This is the entire stack trace of all threads:
===========================================================
#0  0xb7777424 in __kernel_vsyscall ()
#1  0xb73dfe03 in waitpid () from /lib/libc.so.6
#2  0xb7368d4e in ?? () from /lib/libc.so.6
#3  0xb771310b in system () from /lib/libpthread.so.0
#4  0xb773e106 in ?? () from /usr/lib/libsandbox.so
#5  0x086d074b in TUnixSystem::Exec(char const*) ()
#6  0x086d3cb2 in TUnixSystem::StackTrace() ()
#7  0x086d6a47 in TUnixSystem::DispatchSignals(ESignals) ()
#8  0x086d6b8b in SigHandler(ESignals) ()
#9  0x086cf742 in sighandler(int) ()
#10 <signal handler called>
#11 0x084fc61a in ROOT::TMetaUtils::TNormalizedCtxtImpl::keepTypedef(cling::LookupHelper const&, char const*, bool) ()
#12 0x084fc8cb in ROOT::TMetaUtils::TNormalizedCtxtImpl::TNormalizedCtxtImpl(cling::LookupHelper const&) ()
#13 0x084fcbaf in ROOT::TMetaUtils::TNormalizedCtxt::TNormalizedCtxt(cling::LookupHelper const&) ()
#14 0x0892e5e5 in TCling::TCling(char const*, char const*) ()
#15 0x0892f3a7 in CreateInterpreter ()
#16 0x085fa3b1 in TROOT::InitInterpreter() ()
#17 0x085fa75f in ROOT::GetROOT2() ()
#18 0x085f6e75 in ROOT::GetROOT() ()
#19 0x084eb805 in TCling__GetInterpreter ()
#20 0x084bb51a in RootCling(int, char**, bool, bool) ()
#21 0x0848ad6d in main ()
===========================================================


The lines below might hint at the cause of the crash.
If they do not help you then please submit a bug report at
http://root.cern.ch/bugs. Please post the ENTIRE stack trace
from above as an attachment in addition to anything else
that might help us fixing this issue.
===========================================================
#11 0x084fc61a in ROOT::TMetaUtils::TNormalizedCtxtImpl::keepTypedef(cling::LookupHelper const&, char const*, bool) ()
#12 0x084fc8cb in ROOT::TMetaUtils::TNormalizedCtxtImpl::TNormalizedCtxtImpl(cling::LookupHelper const&) ()
#13 0x084fcbaf in ROOT::TMetaUtils::TNormalizedCtxt::TNormalizedCtxt(cling::LookupHelper const&) ()
#14 0x0892e5e5 in TCling::TCling(char const*, char const*) ()
#15 0x0892f3a7 in CreateInterpreter ()
#16 0x085fa3b1 in TROOT::InitInterpreter() ()
#17 0x085fa75f in ROOT::GetROOT2() ()
#18 0x085f6e75 in ROOT::GetROOT() ()
#19 0x084eb805 in TCling__GetInterpreter ()
#20 0x084bb51a in RootCling(int, char**, bool, bool) ()
#21 0x0848ad6d in main ()
===========================================================


 * ERROR: sci-physics/root-6.02.05-r2::gentoo failed (install phase):
 *   PCH generation failed
 *
 * Call stack:
 *     ebuild.sh, line   93:  Called src_install
 *   environment, line 3979:  Called cleanup_install
 *   environment, line  910:  Called die
 * The specific snippet of code:
 *       etc/root/dictpch/makepch-gentoo.sh etc/root/allDict.cxx.pch || die "PCH generation failed"
 *
 * If you need support, post the output of `emerge --info '=sci-physics/root-6.02.05-r2::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-physics/root-6.02.05-r2::gentoo'`.
 * The complete build log is located at '/var/tmp/portage/sci-physics/root-6.02.05-r2/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-physics/root-6.02.05-r2/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-physics/root-6.02.05-r2/image'
 * S: '/var/tmp/portage/sci-physics/root-6.02.05-r2/work/root-6.02.05'