mscottm

Google Refine Reconciliation with NCBO Ontology from SPARQL

Sep 6th, 2012
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  1. Google Refine Reconciliation with NCBO Ontology from SPARQL Endpoint
  2.  
  3. From Fumihiro Kato (during BioHackathon 2011 in Kyoto):
  4. I have reconciled our data with the NCI Thesaurus via the sparql endpoint.
  5. It seems that Animalia has been linked to
  6. http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Animalia
  7. correctly. The settings of Google Refine is the following:
  8. "RDF" => "Add reconciliation service" => "Based on SPARQL Endpoint"
  9. from M. Scott Marshall to Everyone:
  10. Name: BioOntology NCI Thesaurus
  11. Endpoint URL: http://sparql.bioontology.org/sparql
  12. Graph URI: http://purl.bioontology.org/virtual/rdf/download/1032.rdf
  13. Type: Generic SPARQL
  14. Label properties: rdfs:label
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