Windows version

Running 64Bit Version

mothur v.1.36.1
Last updated: 7/27/2015

by
Patrick D. Schloss

Department of Microbiology & Immunology
University of Michigan
pschloss@umich.edu
http://www.mothur.org

When using, please cite:
Schloss, P.D., et al., Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol, 2009. 75(23):7537-41.

Distributed under the GNU General Public License

Type 'help()' for information on the commands that are available

Type 'quit()' to exit program
Interactive Mode


mothur >
set.current(list=demo.list, count=demo.count_table)

Using 1 processors.

Current files saved by mothur:
list=demo.list
count=demo.count_table

mothur >
make.shared(list=current, count=current, label=0.01)
Using demo.count_table as input file for the count parameter.
Using demo.list as input file for the list parameter.
0.01

Output File Names:
demo.shared


mothur >
get.current()

Current files saved by mothur:
list=demo.list
shared=demo.shared
count=demo.count_table

Current default directory saved by mothur: C:\Users\Richard\Documents\Mothur\mothur\

Current working directory: C:\Users\Richard\Desktop\shared test\

mothur >
system(rename demo.list demo.2.list)


mothur >
get.current()

Current files saved by mothur:
list=demo.list
shared=demo.shared
count=demo.count_table

Current default directory saved by mothur: C:\Users\Richard\Documents\Mothur\mothur\

Current working directory: C:\Users\Richard\Desktop\shared test\

mothur >
make.shared(list=current, count=current, label=0.01)
Using demo.count_table as input file for the count parameter.
Using demo.list as input file for the list parameter.
Unable to open demo.list. Trying default C:\Users\Richard\Documents\Mothur\mothur\demo.list
Unable to open C:\Users\Richard\Documents\Mothur\mothur\demo.list
Using demo.list as input file for the list parameter.
[ERROR]: did not complete make.shared.

mothur >
quit()